RNA–Protein interactions for RNA: ENST00000504502.1

ZCCHC9-205, Transcript of zinc finger CCHC-type containing 9, humanhuman

TSL 3

Gene ZCCHC9, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC9-205ENST00000504502 AEBP2Q6ZN18 517 aaPredicted RBP24.38■■□□□ 1.49
ZCCHC9-205ENST00000504502 CHIC1Q5VXU3 224 aa22.88■■□□□ 1.25
ZCCHC9-205ENST00000504502 SENP3Q9H4L4 574 aaPredicted RBP21■□□□□ 0.95
ZCCHC9-205ENST00000504502 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
ZCCHC9-205ENST00000504502 FOXD1Q16676 465 aa19.58■□□□□ 0.72
ZCCHC9-205ENST00000504502 POTEDQ86YR6 584 aa19.24■□□□□ 0.67
ZCCHC9-205ENST00000504502 MSH5O43196 834 aa18.66■□□□□ 0.58
ZCCHC9-205ENST00000504502 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
ZCCHC9-205ENST00000504502 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
ZCCHC9-205ENST00000504502 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
ZCCHC9-205ENST00000504502 ADRA2BP18089 450 aa17.7■□□□□ 0.42
ZCCHC9-205ENST00000504502 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
ZCCHC9-205ENST00000504502 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
ZCCHC9-205ENST00000504502 CACNB1Q02641 598 aaPredicted RBP16.38■□□□□ 0.21
ZCCHC9-205ENST00000504502 SCAF1Q9H7N4 1312 aaKnown RBP16.34■□□□□ 0.21
ZCCHC9-205ENST00000504502 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
ZCCHC9-205ENST00000504502 RNF39Q9H2S5 420 aa15.82■□□□□ 0.12
ZCCHC9-205ENST00000504502 HOXD11P31277 338 aaPredicted RBP15.68■□□□□ 0.1
ZCCHC9-205ENST00000504502 C1QBPQ07021 282 aaKnown RBP15.61■□□□□ 0.09
ZCCHC9-205ENST00000504502 PPP4R3CPQ6ZMV5 832 aa15.48■□□□□ 0.07
ZCCHC9-205ENST00000504502 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
ZCCHC9-205ENST00000504502 CNKSR2Q8WXI2 1034 aa15.37■□□□□ 0.05
ZCCHC9-205ENST00000504502 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
ZCCHC9-205ENST00000504502 POTEHQ6S545 545 aa14.97□□□□□ -0.01
ZCCHC9-205ENST00000504502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.95□□□□□ -0.025e-8■□□□□ 10.1
ZCCHC9-205ENST00000504502 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
ZCCHC9-205ENST00000504502 DSG3P32926 999 aa14.59□□□□□ -0.07
ZCCHC9-205ENST00000504502 CAPN15O75808 1086 aa14.52□□□□□ -0.09
ZCCHC9-205ENST00000504502 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
ZCCHC9-205ENST00000504502 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
ZCCHC9-205ENST00000504502 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
ZCCHC9-205ENST00000504502 APLP2Q06481 763 aa14.16□□□□□ -0.14
ZCCHC9-205ENST00000504502 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
ZCCHC9-205ENST00000504502 ZNF219Q9P2Y4 722 aaPredicted RBP14.13□□□□□ -0.15
ZCCHC9-205ENST00000504502 ABCB7O75027 752 aa14.08□□□□□ -0.16
ZCCHC9-205ENST00000504502 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
ZCCHC9-205ENST00000504502 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.99□□□□□ -0.17
ZCCHC9-205ENST00000504502 HNRNPUL2Q1KMD3 747 aaKnown RBP13.99□□□□□ -0.17
ZCCHC9-205ENST00000504502 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
ZCCHC9-205ENST00000504502 CHRDL2Q6WN34 429 aa13.9□□□□□ -0.18
ZCCHC9-205ENST00000504502 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
ZCCHC9-205ENST00000504502 SP7Q8TDD2 431 aaPredicted RBP13.73□□□□□ -0.21
ZCCHC9-205ENST00000504502 POLA2Q14181 598 aa13.62□□□□□ -0.23
ZCCHC9-205ENST00000504502 KCNA4P22459 653 aa13.58□□□□□ -0.24
ZCCHC9-205ENST00000504502 AKT1S1Q96B36 256 aa13.53□□□□□ -0.24
ZCCHC9-205ENST00000504502 MYCNP04198 464 aaPredicted RBP13.42□□□□□ -0.26
ZCCHC9-205ENST00000504502 PIP4P2Q8N4L2 257 aa13.41□□□□□ -0.26
ZCCHC9-205ENST00000504502 HAX1O00165 279 aa13.38□□□□□ -0.27
ZCCHC9-205ENST00000504502 REM2Q8IYK8 340 aaPredicted RBP13.37□□□□□ -0.27
ZCCHC9-205ENST00000504502 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
ZCCHC9-205ENST00000504502 FXR2P51116 673 aaKnown RBP eCLIP13.25□□□□□ -0.29
ZCCHC9-205ENST00000504502 PITPNM1O00562 1244 aa13.2□□□□□ -0.3
ZCCHC9-205ENST00000504502 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
ZCCHC9-205ENST00000504502 EVX2Q03828 476 aa13.09□□□□□ -0.31
ZCCHC9-205ENST00000504502 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
ZCCHC9-205ENST00000504502 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
ZCCHC9-205ENST00000504502 LHX8Q68G74 356 aa12.89□□□□□ -0.35
ZCCHC9-205ENST00000504502 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
ZCCHC9-205ENST00000504502 SPDYE2BA6NHP3 402 aa12.86□□□□□ -0.35
ZCCHC9-205ENST00000504502 SPDYE6P0CI01 402 aa12.86□□□□□ -0.35
ZCCHC9-205ENST00000504502 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
ZCCHC9-205ENST00000504502 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
ZCCHC9-205ENST00000504502 GABBR2O75899 941 aa12.82□□□□□ -0.36
ZCCHC9-205ENST00000504502 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
ZCCHC9-205ENST00000504502 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
ZCCHC9-205ENST00000504502 FBLN2P98095 1184 aa12.73□□□□□ -0.37
ZCCHC9-205ENST00000504502 SLC4A1APQ9BWU0 796 aaKnown RBP12.73□□□□□ -0.37
ZCCHC9-205ENST00000504502 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
ZCCHC9-205ENST00000504502 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
ZCCHC9-205ENST00000504502 SSUH2Q9Y2M2 353 aa12.58□□□□□ -0.4
ZCCHC9-205ENST00000504502 PLSCR2Q9NRY7 297 aa12.57□□□□□ -0.4
ZCCHC9-205ENST00000504502 CHADLQ6NUI6 762 aa12.54□□□□□ -0.4
ZCCHC9-205ENST00000504502 CLCN6P51797 869 aa12.53□□□□□ -0.4
ZCCHC9-205ENST00000504502 PRR29P0C7W0 189 aa12.5□□□□□ -0.41
ZCCHC9-205ENST00000504502 POTEIP0CG38 1075 aa12.49□□□□□ -0.41
ZCCHC9-205ENST00000504502 MKRN4PQ13434 485 aaPredicted RBP12.46□□□□□ -0.41
ZCCHC9-205ENST00000504502 ZBTB22O15209 634 aa12.43□□□□□ -0.42
ZCCHC9-205ENST00000504502 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
ZCCHC9-205ENST00000504502 DCBLD2Q96PD2 775 aa12.37□□□□□ -0.43
ZCCHC9-205ENST00000504502 PABPN1Q86U42 306 aaKnown RBP eCLIP12.36□□□□□ -0.43
ZCCHC9-205ENST00000504502 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
ZCCHC9-205ENST00000504502 ZNF579Q8NAF0 562 aaKnown RBP12.22□□□□□ -0.45
ZCCHC9-205ENST00000504502 OTUD5Q96G74 571 aa12.18□□□□□ -0.46
ZCCHC9-205ENST00000504502 ZRANB1Q9UGI0 708 aa12.16□□□□□ -0.46
ZCCHC9-205ENST00000504502 POTEMA6NI47 508 aa12.15□□□□□ -0.46
ZCCHC9-205ENST00000504502 PCDH10Q9P2E7 1040 aa12.1□□□□□ -0.47
ZCCHC9-205ENST00000504502 POTEGQ6S5H5 508 aa12.09□□□□□ -0.47
ZCCHC9-205ENST00000504502 GALR2O43603 387 aaPredicted RBP12.07□□□□□ -0.48
ZCCHC9-205ENST00000504502 POTEB2H3BUK9 544 aa12.06□□□□□ -0.48
ZCCHC9-205ENST00000504502 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
ZCCHC9-205ENST00000504502 PAK3O75914 559 aaPredicted RBP11.98□□□□□ -0.49
ZCCHC9-205ENST00000504502 STAG3Q9UJ98 1225 aa11.97□□□□□ -0.49
ZCCHC9-205ENST00000504502 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
ZCCHC9-205ENST00000504502 PELP1Q8IZL8 1130 aaKnown RBP11.89□□□□□ -0.51
ZCCHC9-205ENST00000504502 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
ZCCHC9-205ENST00000504502 C7P10643 843 aa11.85□□□□□ -0.51
ZCCHC9-205ENST00000504502 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
ZCCHC9-205ENST00000504502 METRNQ9UJH8 293 aa11.84□□□□□ -0.51
ZCCHC9-205ENST00000504502 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
ZCCHC9-205ENST00000504502 ASTLQ6HA08 431 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms