RNA–Protein interactions for RNA: ENST00000504488.1

ALPK1-206, Transcript of alpha kinase 1, humanhuman

TSL 3

Gene ALPK1, Length 590 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK1-206ENST00000504488 AEBP2Q6ZN18 517 aaPredicted RBP31.56■■■□□ 2.64
ALPK1-206ENST00000504488 CHIC1Q5VXU3 224 aa29.65■■■□□ 2.34
ALPK1-206ENST00000504488 SENP3Q9H4L4 574 aaPredicted RBP26.99■■□□□ 1.91
ALPK1-206ENST00000504488 PHF23Q9BUL5 403 aaPredicted RBP26.6■■□□□ 1.85
ALPK1-206ENST00000504488 FOXD1Q16676 465 aa25.19■■□□□ 1.62
ALPK1-206ENST00000504488 MSH5O43196 834 aa23.72■■□□□ 1.39
ALPK1-206ENST00000504488 POTEDQ86YR6 584 aa23.71■■□□□ 1.39
ALPK1-206ENST00000504488 PLPPR3Q6T4P5 718 aa23.54■■□□□ 1.36
ALPK1-206ENST00000504488 PIAS4Q8N2W9 510 aaPredicted RBP23.43■■□□□ 1.34
ALPK1-206ENST00000504488 PPP6R1Q9UPN7 881 aa23.29■■□□□ 1.32
ALPK1-206ENST00000504488 ADRA2BP18089 450 aa23.19■■□□□ 1.3
ALPK1-206ENST00000504488 MAPK8IP2Q13387 824 aaPredicted RBP21.41■■□□□ 1.02
ALPK1-206ENST00000504488 DMRT2Q9Y5R5 561 aa21.35■■□□□ 1.01
ALPK1-206ENST00000504488 SCAF1Q9H7N4 1312 aaKnown RBP21.27■□□□□ 0.99
ALPK1-206ENST00000504488 PPP4R3CPQ6ZMV5 832 aa20.59■□□□□ 0.89
ALPK1-206ENST00000504488 CACNB1Q02641 598 aaPredicted RBP20.55■□□□□ 0.88
ALPK1-206ENST00000504488 DCAF8L1A6NGE4 600 aa20.46■□□□□ 0.87
ALPK1-206ENST00000504488 HOXD11P31277 338 aaPredicted RBP20.44■□□□□ 0.86
ALPK1-206ENST00000504488 CNKSR2Q8WXI2 1034 aa20.29■□□□□ 0.84
ALPK1-206ENST00000504488 RNF39Q9H2S5 420 aa20.21■□□□□ 0.83
ALPK1-206ENST00000504488 RNF216Q9NWF9 866 aaPredicted RBP20.19■□□□□ 0.82
ALPK1-206ENST00000504488 C1QBPQ07021 282 aaKnown RBP19.9■□□□□ 0.78
ALPK1-206ENST00000504488 DNAJC5BQ9UF47 199 aa19.84■□□□□ 0.77
ALPK1-206ENST00000504488 NCBP3Q53F19 620 aaKnown RBP19.71■□□□□ 0.75
ALPK1-206ENST00000504488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.71
ALPK1-206ENST00000504488 NPM3O75607 178 aaKnown RBP19.4■□□□□ 0.7
ALPK1-206ENST00000504488 U3KPZ7 1027 aaPredicted RBP19■□□□□ 0.63
ALPK1-206ENST00000504488 SPINK5Q9NQ38 1064 aaPredicted RBP18.82■□□□□ 0.6
ALPK1-206ENST00000504488 CAPN15O75808 1086 aa18.81■□□□□ 0.6
ALPK1-206ENST00000504488 DSG3P32926 999 aa18.8■□□□□ 0.6
ALPK1-206ENST00000504488 KCNA4P22459 653 aa18.71■□□□□ 0.59
ALPK1-206ENST00000504488 SLC4A2P04920 1241 aa18.62■□□□□ 0.57
ALPK1-206ENST00000504488 POTEHQ6S545 545 aa18.52■□□□□ 0.56
ALPK1-206ENST00000504488 APLP2Q06481 763 aa18.46■□□□□ 0.55
ALPK1-206ENST00000504488 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
ALPK1-206ENST00000504488 ZNF219Q9P2Y4 722 aaPredicted RBP18.39■□□□□ 0.53
ALPK1-206ENST00000504488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.38■□□□□ 0.53
ALPK1-206ENST00000504488 HNRNPUL2Q1KMD3 747 aaKnown RBP18.38■□□□□ 0.53
ALPK1-206ENST00000504488 ABCB7O75027 752 aa18.33■□□□□ 0.52
ALPK1-206ENST00000504488 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
ALPK1-206ENST00000504488 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
ALPK1-206ENST00000504488 RBM42Q9BTD8 480 aaKnown RBP17.95■□□□□ 0.46
ALPK1-206ENST00000504488 POLA2Q14181 598 aa17.88■□□□□ 0.45
ALPK1-206ENST00000504488 CHRDL2Q6WN34 429 aa17.69■□□□□ 0.42
ALPK1-206ENST00000504488 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
ALPK1-206ENST00000504488 FOXD4L1Q9NU39 408 aa17.58■□□□□ 0.4
ALPK1-206ENST00000504488 ATF5Q9Y2D1 282 aaPredicted RBP17.56■□□□□ 0.4
ALPK1-206ENST00000504488 ZBTB12Q9Y330 459 aaPredicted RBP17.5■□□□□ 0.39
ALPK1-206ENST00000504488 AKT1S1Q96B36 256 aa17.48■□□□□ 0.39
ALPK1-206ENST00000504488 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
ALPK1-206ENST00000504488 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
ALPK1-206ENST00000504488 ZBTB22O15209 634 aa17.2■□□□□ 0.34
ALPK1-206ENST00000504488 SP7Q8TDD2 431 aaPredicted RBP17.2■□□□□ 0.34
ALPK1-206ENST00000504488 PIP4P2Q8N4L2 257 aa17.19■□□□□ 0.34
ALPK1-206ENST00000504488 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
ALPK1-206ENST00000504488 ATXN8OSP0DMR3 200 aa17.11■□□□□ 0.33
ALPK1-206ENST00000504488 FXR2P51116 673 aaKnown RBP eCLIP17.05■□□□□ 0.32
ALPK1-206ENST00000504488 HAX1O00165 279 aa16.98■□□□□ 0.31
ALPK1-206ENST00000504488 SPDYE2BA6NHP3 402 aa16.92■□□□□ 0.3
ALPK1-206ENST00000504488 SPDYE6P0CI01 402 aa16.92■□□□□ 0.3
ALPK1-206ENST00000504488 SPDYE2Q495Y8 402 aa16.92■□□□□ 0.3
ALPK1-206ENST00000504488 FBLN2P98095 1184 aa16.91■□□□□ 0.3
ALPK1-206ENST00000504488 EVX2Q03828 476 aa16.74■□□□□ 0.27
ALPK1-206ENST00000504488 MKRN4PQ13434 485 aaPredicted RBP16.73■□□□□ 0.27
ALPK1-206ENST00000504488 SPDYE1Q8NFV5 336 aaPredicted RBP16.71■□□□□ 0.27
ALPK1-206ENST00000504488 CLEC11AQ9Y240 323 aa16.68■□□□□ 0.26
ALPK1-206ENST00000504488 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
ALPK1-206ENST00000504488 ZNF692Q9BU19 519 aaPredicted RBP16.67■□□□□ 0.26
ALPK1-206ENST00000504488 SSUH2Q9Y2M2 353 aa16.66■□□□□ 0.26
ALPK1-206ENST00000504488 C19orf67A6NJJ6 358 aa16.52■□□□□ 0.24
ALPK1-206ENST00000504488 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
ALPK1-206ENST00000504488 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
ALPK1-206ENST00000504488 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
ALPK1-206ENST00000504488 CHADLQ6NUI6 762 aa16.39■□□□□ 0.21
ALPK1-206ENST00000504488 PRR29P0C7W0 189 aa16.38■□□□□ 0.21
ALPK1-206ENST00000504488 GABBR2O75899 941 aa16.35■□□□□ 0.21
ALPK1-206ENST00000504488 LHX8Q68G74 356 aa16.14■□□□□ 0.17
ALPK1-206ENST00000504488 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
ALPK1-206ENST00000504488 CD44P16070 742 aaKnown RBP16.11■□□□□ 0.17
ALPK1-206ENST00000504488 CLCN6P51797 869 aa16.02■□□□□ 0.16
ALPK1-206ENST00000504488 POTEIP0CG38 1075 aa15.99■□□□□ 0.15
ALPK1-206ENST00000504488 STAG3Q9UJ98 1225 aa15.91■□□□□ 0.14
ALPK1-206ENST00000504488 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
ALPK1-206ENST00000504488 ZNF579Q8NAF0 562 aaKnown RBP15.86■□□□□ 0.13
ALPK1-206ENST00000504488 DCBLD2Q96PD2 775 aa15.84■□□□□ 0.13
ALPK1-206ENST00000504488 ZRANB1Q9UGI0 708 aa15.84■□□□□ 0.13
ALPK1-206ENST00000504488 SPDYE4A6NLX3 237 aa15.78■□□□□ 0.12
ALPK1-206ENST00000504488 GALR2O43603 387 aaPredicted RBP15.67■□□□□ 0.1
ALPK1-206ENST00000504488 PAK3O75914 559 aaPredicted RBP15.64■□□□□ 0.09
ALPK1-206ENST00000504488 NPM1P06748 294 aaKnown RBP eCLIP15.61■□□□□ 0.09
ALPK1-206ENST00000504488 MNX1P50219 401 aaPredicted RBP15.57■□□□□ 0.08
ALPK1-206ENST00000504488 PHF12Q96QT6 1004 aa15.57■□□□□ 0.08
ALPK1-206ENST00000504488 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
ALPK1-206ENST00000504488 POTEB2H3BUK9 544 aa15.46■□□□□ 0.07
ALPK1-206ENST00000504488 PELP1Q8IZL8 1130 aaKnown RBP15.42■□□□□ 0.06
ALPK1-206ENST00000504488 PROM2Q8N271 834 aa15.36■□□□□ 0.05
ALPK1-206ENST00000504488 MS4A3Q96HJ5 214 aa15.36■□□□□ 0.05
ALPK1-206ENST00000504488 ASTLQ6HA08 431 aaPredicted RBP15.35■□□□□ 0.05
ALPK1-206ENST00000504488 PLSCR2Q9NRY7 297 aa15.34■□□□□ 0.05
ALPK1-206ENST00000504488 ATMINO43313 823 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms