RNA–Protein interactions for RNA: ENST00000504150.1

CCSER1-204, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 619 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-204ENST00000504150 AEBP2Q6ZN18 517 aaPredicted RBP26.74■■□□□ 1.87
CCSER1-204ENST00000504150 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
CCSER1-204ENST00000504150 SENP3Q9H4L4 574 aaPredicted RBP22.82■■□□□ 1.24
CCSER1-204ENST00000504150 PHF23Q9BUL5 403 aaPredicted RBP22.5■■□□□ 1.19
CCSER1-204ENST00000504150 FOXD1Q16676 465 aa21.37■■□□□ 1.01
CCSER1-204ENST00000504150 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
CCSER1-204ENST00000504150 POTEDQ86YR6 584 aa20.5■□□□□ 0.87
CCSER1-204ENST00000504150 MSH5O43196 834 aa20.14■□□□□ 0.81
CCSER1-204ENST00000504150 PPP6R1Q9UPN7 881 aa19.93■□□□□ 0.78
CCSER1-204ENST00000504150 ADRA2BP18089 450 aa19.91■□□□□ 0.78
CCSER1-204ENST00000504150 PIAS4Q8N2W9 510 aaPredicted RBP19.87■□□□□ 0.77
CCSER1-204ENST00000504150 SCAF1Q9H7N4 1312 aaKnown RBP18.36■□□□□ 0.53
CCSER1-204ENST00000504150 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
CCSER1-204ENST00000504150 PPP4R3CPQ6ZMV5 832 aa18.09■□□□□ 0.49
CCSER1-204ENST00000504150 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
CCSER1-204ENST00000504150 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
CCSER1-204ENST00000504150 CACNB1Q02641 598 aaPredicted RBP17.59■□□□□ 0.41
CCSER1-204ENST00000504150 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
CCSER1-204ENST00000504150 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
CCSER1-204ENST00000504150 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
CCSER1-204ENST00000504150 DCAF8L1A6NGE4 600 aa17.38■□□□□ 0.37
CCSER1-204ENST00000504150 NPM3O75607 178 aaKnown RBP17.19■□□□□ 0.34
CCSER1-204ENST00000504150 RNF39Q9H2S5 420 aa17.16■□□□□ 0.34
CCSER1-204ENST00000504150 KCNA4P22459 653 aa17.09■□□□□ 0.33
CCSER1-204ENST00000504150 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
CCSER1-204ENST00000504150 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
CCSER1-204ENST00000504150 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
CCSER1-204ENST00000504150 U3KPZ7 1027 aaPredicted RBP16.36■□□□□ 0.21
CCSER1-204ENST00000504150 SLC4A2P04920 1241 aa16.33■□□□□ 0.2
CCSER1-204ENST00000504150 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
CCSER1-204ENST00000504150 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
CCSER1-204ENST00000504150 HNRNPUL2Q1KMD3 747 aaKnown RBP16.11■□□□□ 0.17
CCSER1-204ENST00000504150 APLP2Q06481 763 aa16.09■□□□□ 0.17
CCSER1-204ENST00000504150 CAPN15O75808 1086 aa16.06■□□□□ 0.16
CCSER1-204ENST00000504150 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
CCSER1-204ENST00000504150 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
CCSER1-204ENST00000504150 MYCNP04198 464 aaPredicted RBP15.96■□□□□ 0.15
CCSER1-204ENST00000504150 POTEHQ6S545 545 aa15.96■□□□□ 0.15
CCSER1-204ENST00000504150 DSG3P32926 999 aa15.92■□□□□ 0.14
CCSER1-204ENST00000504150 FOXD4L1Q9NU39 408 aa15.92■□□□□ 0.14
CCSER1-204ENST00000504150 ZNF219Q9P2Y4 722 aaPredicted RBP15.88■□□□□ 0.13
CCSER1-204ENST00000504150 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
CCSER1-204ENST00000504150 ZBTB22O15209 634 aa15.66■□□□□ 0.1
CCSER1-204ENST00000504150 ABCB7O75027 752 aa15.66■□□□□ 0.1
CCSER1-204ENST00000504150 POLA2Q14181 598 aa15.48■□□□□ 0.07
CCSER1-204ENST00000504150 ATF5Q9Y2D1 282 aaPredicted RBP15.46■□□□□ 0.07
CCSER1-204ENST00000504150 ATXN8OSP0DMR3 200 aa15.44■□□□□ 0.06
CCSER1-204ENST00000504150 ZBTB12Q9Y330 459 aaPredicted RBP15.27■□□□□ 0.04
CCSER1-204ENST00000504150 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
CCSER1-204ENST00000504150 RBM42Q9BTD8 480 aaKnown RBP15.22■□□□□ 0.03
CCSER1-204ENST00000504150 EHMT2Q96KQ7 1210 aa15.19■□□□□ 0.02
CCSER1-204ENST00000504150 CHRDL2Q6WN34 429 aa15.05■□□□□ -0
CCSER1-204ENST00000504150 FBLN2P98095 1184 aa15□□□□□ -0.01
CCSER1-204ENST00000504150 OSCARQ8IYS5 282 aa14.96□□□□□ -0.01
CCSER1-204ENST00000504150 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
CCSER1-204ENST00000504150 SPDYE2BA6NHP3 402 aa14.78□□□□□ -0.04
CCSER1-204ENST00000504150 SPDYE6P0CI01 402 aa14.78□□□□□ -0.04
CCSER1-204ENST00000504150 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
CCSER1-204ENST00000504150 SPDYE2Q495Y8 402 aa14.78□□□□□ -0.04
CCSER1-204ENST00000504150 SP7Q8TDD2 431 aaPredicted RBP14.74□□□□□ -0.05
CCSER1-204ENST00000504150 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
CCSER1-204ENST00000504150 ZNF692Q9BU19 519 aaPredicted RBP14.64□□□□□ -0.07
CCSER1-204ENST00000504150 PIP4P2Q8N4L2 257 aa14.6□□□□□ -0.07
CCSER1-204ENST00000504150 SSUH2Q9Y2M2 353 aa14.56□□□□□ -0.08
CCSER1-204ENST00000504150 PITPNM1O00562 1244 aa14.54□□□□□ -0.08
CCSER1-204ENST00000504150 SPDYE1Q8NFV5 336 aaPredicted RBP14.47□□□□□ -0.09
CCSER1-204ENST00000504150 HAX1O00165 279 aa14.45□□□□□ -0.1
CCSER1-204ENST00000504150 FXR2P51116 673 aaKnown RBP eCLIP14.43□□□□□ -0.1
CCSER1-204ENST00000504150 PABPN1Q86U42 306 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCSER1-204ENST00000504150 CLEC11AQ9Y240 323 aa14.4□□□□□ -0.1
CCSER1-204ENST00000504150 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
CCSER1-204ENST00000504150 EVX2Q03828 476 aa14.28□□□□□ -0.12
CCSER1-204ENST00000504150 PRR29P0C7W0 189 aa14.23□□□□□ -0.13
CCSER1-204ENST00000504150 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
CCSER1-204ENST00000504150 STAG3Q9UJ98 1225 aa14.14□□□□□ -0.15
CCSER1-204ENST00000504150 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
CCSER1-204ENST00000504150 C19orf67A6NJJ6 358 aa13.98□□□□□ -0.17
CCSER1-204ENST00000504150 PROM2Q8N271 834 aa13.94□□□□□ -0.18
CCSER1-204ENST00000504150 FARP1Q9Y4F1 1045 aaPredicted RBP13.91□□□□□ -0.18
CCSER1-204ENST00000504150 GABBR2O75899 941 aa13.9□□□□□ -0.18
CCSER1-204ENST00000504150 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
CCSER1-204ENST00000504150 FKBP8Q14318 412 aa13.83□□□□□ -0.2
CCSER1-204ENST00000504150 LHX8Q68G74 356 aa13.82□□□□□ -0.2
CCSER1-204ENST00000504150 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
CCSER1-204ENST00000504150 NPM1P06748 294 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCSER1-204ENST00000504150 PLEKHG5O94827 1062 aa13.69□□□□□ -0.22
CCSER1-204ENST00000504150 PAK3O75914 559 aaPredicted RBP13.63□□□□□ -0.23
CCSER1-204ENST00000504150 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
CCSER1-204ENST00000504150 MNX1P50219 401 aaPredicted RBP13.63□□□□□ -0.23
CCSER1-204ENST00000504150 MIER1Q8N108 512 aa13.63□□□□□ -0.23
CCSER1-204ENST00000504150 CLCN6P51797 869 aa13.61□□□□□ -0.23
CCSER1-204ENST00000504150 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
CCSER1-204ENST00000504150 PLCD3Q8N3E9 789 aa13.57□□□□□ -0.24
CCSER1-204ENST00000504150 ZNF579Q8NAF0 562 aaKnown RBP13.56□□□□□ -0.24
CCSER1-204ENST00000504150 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
CCSER1-204ENST00000504150 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
CCSER1-204ENST00000504150 DCBLD2Q96PD2 775 aa13.41□□□□□ -0.26
CCSER1-204ENST00000504150 PHF12Q96QT6 1004 aa13.41□□□□□ -0.26
CCSER1-204ENST00000504150 TSPYL2Q9H2G4 693 aaPredicted RBP13.41□□□□□ -0.26
CCSER1-204ENST00000504150 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms