RNA–Protein interactions for RNA: ENST00000504039.2

RAPGEF6-204, Transcript of Rap guanine nucleotide exchange factor 6, humanhuman

TSL 4

Gene RAPGEF6, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF6-204ENST00000504039 AEBP2Q6ZN18 517 aaPredicted RBP26.21■■□□□ 1.79
RAPGEF6-204ENST00000504039 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
RAPGEF6-204ENST00000504039 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
RAPGEF6-204ENST00000504039 PHF23Q9BUL5 403 aaPredicted RBP22.02■■□□□ 1.12
RAPGEF6-204ENST00000504039 FOXD1Q16676 465 aa20.85■□□□□ 0.93
RAPGEF6-204ENST00000504039 PLPPR3Q6T4P5 718 aa19.66■□□□□ 0.74
RAPGEF6-204ENST00000504039 MSH5O43196 834 aa19.5■□□□□ 0.71
RAPGEF6-204ENST00000504039 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
RAPGEF6-204ENST00000504039 PIAS4Q8N2W9 510 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF6-204ENST00000504039 ADRA2BP18089 450 aa19.33■□□□□ 0.68
RAPGEF6-204ENST00000504039 POTEDQ86YR6 584 aa19.31■□□□□ 0.68
RAPGEF6-204ENST00000504039 MAPK8IP2Q13387 824 aaPredicted RBP17.81■□□□□ 0.44
RAPGEF6-204ENST00000504039 DMRT2Q9Y5R5 561 aa17.69■□□□□ 0.42
RAPGEF6-204ENST00000504039 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
RAPGEF6-204ENST00000504039 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
RAPGEF6-204ENST00000504039 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
RAPGEF6-204ENST00000504039 DCAF8L1A6NGE4 600 aa16.92■□□□□ 0.3
RAPGEF6-204ENST00000504039 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
RAPGEF6-204ENST00000504039 RNF216Q9NWF9 866 aaPredicted RBP16.82■□□□□ 0.28
RAPGEF6-204ENST00000504039 CACNB1Q02641 598 aaPredicted RBP16.81■□□□□ 0.28
RAPGEF6-204ENST00000504039 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
RAPGEF6-204ENST00000504039 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
RAPGEF6-204ENST00000504039 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
RAPGEF6-204ENST00000504039 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
RAPGEF6-204ENST00000504039 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
RAPGEF6-204ENST00000504039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.14■□□□□ 0.17
RAPGEF6-204ENST00000504039 KCNA4P22459 653 aa15.89■□□□□ 0.13
RAPGEF6-204ENST00000504039 U3KPZ7 1027 aaPredicted RBP15.85■□□□□ 0.13
RAPGEF6-204ENST00000504039 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
RAPGEF6-204ENST00000504039 SLC4A2P04920 1241 aa15.64■□□□□ 0.09
RAPGEF6-204ENST00000504039 CAPN15O75808 1086 aa15.58■□□□□ 0.08
RAPGEF6-204ENST00000504039 DSG3P32926 999 aa15.57■□□□□ 0.08
RAPGEF6-204ENST00000504039 TRHP20396 242 aaPredicted RBP15.32■□□□□ 0.04
RAPGEF6-204ENST00000504039 APLP2Q06481 763 aa15.28■□□□□ 0.04
RAPGEF6-204ENST00000504039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF6-204ENST00000504039 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.04
RAPGEF6-204ENST00000504039 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
RAPGEF6-204ENST00000504039 ABCB7O75027 752 aa15.25■□□□□ 0.03
RAPGEF6-204ENST00000504039 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
RAPGEF6-204ENST00000504039 POTEHQ6S545 545 aa15.09■□□□□ 0.01
RAPGEF6-204ENST00000504039 MYCNP04198 464 aaPredicted RBP15.05■□□□□ -0
RAPGEF6-204ENST00000504039 SLC4A1APQ9BWU0 796 aaKnown RBP14.93□□□□□ -0.02
RAPGEF6-204ENST00000504039 POLA2Q14181 598 aa14.89□□□□□ -0.03
RAPGEF6-204ENST00000504039 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
RAPGEF6-204ENST00000504039 RBM42Q9BTD8 480 aaKnown RBP14.8□□□□□ -0.04
RAPGEF6-204ENST00000504039 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
RAPGEF6-204ENST00000504039 ZBTB22O15209 634 aa14.65□□□□□ -0.06
RAPGEF6-204ENST00000504039 CHRDL2Q6WN34 429 aa14.56□□□□□ -0.08
RAPGEF6-204ENST00000504039 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.09
RAPGEF6-204ENST00000504039 AKT1S1Q96B36 256 aa14.45□□□□□ -0.1
RAPGEF6-204ENST00000504039 OSCARQ8IYS5 282 aa14.44□□□□□ -0.1
RAPGEF6-204ENST00000504039 ATXN8OSP0DMR3 200 aa14.38□□□□□ -0.11
RAPGEF6-204ENST00000504039 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
RAPGEF6-204ENST00000504039 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
RAPGEF6-204ENST00000504039 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
RAPGEF6-204ENST00000504039 FBLN2P98095 1184 aa14.12□□□□□ -0.15
RAPGEF6-204ENST00000504039 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
RAPGEF6-204ENST00000504039 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF6-204ENST00000504039 SPDYE2BA6NHP3 402 aa14.09□□□□□ -0.15
RAPGEF6-204ENST00000504039 SPDYE6P0CI01 402 aa14.09□□□□□ -0.15
RAPGEF6-204ENST00000504039 SPDYE2Q495Y8 402 aa14.09□□□□□ -0.15
RAPGEF6-204ENST00000504039 SP7Q8TDD2 431 aaPredicted RBP14.08□□□□□ -0.16
RAPGEF6-204ENST00000504039 HAX1O00165 279 aa13.95□□□□□ -0.18
RAPGEF6-204ENST00000504039 SSUH2Q9Y2M2 353 aa13.93□□□□□ -0.18
RAPGEF6-204ENST00000504039 ZNF692Q9BU19 519 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF6-204ENST00000504039 SPDYE1Q8NFV5 336 aaPredicted RBP13.87□□□□□ -0.19
RAPGEF6-204ENST00000504039 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
RAPGEF6-204ENST00000504039 EVX2Q03828 476 aa13.85□□□□□ -0.19
RAPGEF6-204ENST00000504039 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
RAPGEF6-204ENST00000504039 PRKAR2AP13861 404 aaKnown RBP13.81□□□□□ -0.2
RAPGEF6-204ENST00000504039 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
RAPGEF6-204ENST00000504039 C19orf67A6NJJ6 358 aa13.66□□□□□ -0.22
RAPGEF6-204ENST00000504039 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
RAPGEF6-204ENST00000504039 PRR29P0C7W0 189 aa13.61□□□□□ -0.23
RAPGEF6-204ENST00000504039 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
RAPGEF6-204ENST00000504039 GABBR2O75899 941 aa13.48□□□□□ -0.25
RAPGEF6-204ENST00000504039 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF6-204ENST00000504039 CD44P16070 742 aaKnown RBP13.36□□□□□ -0.27
RAPGEF6-204ENST00000504039 SPDYE4A6NLX3 237 aa13.31□□□□□ -0.28
RAPGEF6-204ENST00000504039 CREBZFQ9NS37 354 aa13.29□□□□□ -0.28
RAPGEF6-204ENST00000504039 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
RAPGEF6-204ENST00000504039 POTEIP0CG38 1075 aa13.24□□□□□ -0.29
RAPGEF6-204ENST00000504039 LHX8Q68G74 356 aa13.2□□□□□ -0.3
RAPGEF6-204ENST00000504039 CLCN6P51797 869 aa13.16□□□□□ -0.3
RAPGEF6-204ENST00000504039 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
RAPGEF6-204ENST00000504039 ZRANB1Q9UGI0 708 aa13.15□□□□□ -0.3
RAPGEF6-204ENST00000504039 MNX1P50219 401 aaPredicted RBP13.08□□□□□ -0.32
RAPGEF6-204ENST00000504039 DCBLD2Q96PD2 775 aa13.05□□□□□ -0.32
RAPGEF6-204ENST00000504039 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
RAPGEF6-204ENST00000504039 PROM2Q8N271 834 aa13.01□□□□□ -0.33
RAPGEF6-204ENST00000504039 PHF12Q96QT6 1004 aa12.98□□□□□ -0.33
RAPGEF6-204ENST00000504039 NPM1P06748 294 aaKnown RBP eCLIP12.97□□□□□ -0.33
RAPGEF6-204ENST00000504039 PAK3O75914 559 aaPredicted RBP12.96□□□□□ -0.33
RAPGEF6-204ENST00000504039 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
RAPGEF6-204ENST00000504039 PELP1Q8IZL8 1130 aaKnown RBP12.81□□□□□ -0.36
RAPGEF6-204ENST00000504039 MS4A3Q96HJ5 214 aa12.8□□□□□ -0.36
RAPGEF6-204ENST00000504039 TSPYL2Q9H2G4 693 aaPredicted RBP12.77□□□□□ -0.37
RAPGEF6-204ENST00000504039 OTUD5Q96G74 571 aa12.76□□□□□ -0.37
RAPGEF6-204ENST00000504039 CCDC61Q9Y6R9 512 aa12.75□□□□□ -0.37
RAPGEF6-204ENST00000504039 ASTLQ6HA08 431 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms