RNA–Protein interactions for RNA: ENST00000504018.1

NREP-211, Transcript of neuronal regeneration related protein, humanhuman

TSL 1 (best)

Gene NREP, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NREP-211ENST00000504018 AEBP2Q6ZN18 517 aaPredicted RBP25.49■■□□□ 1.67
NREP-211ENST00000504018 CHIC1Q5VXU3 224 aa24.18■■□□□ 1.46
NREP-211ENST00000504018 SENP3Q9H4L4 574 aaPredicted RBP21.72■■□□□ 1.07
NREP-211ENST00000504018 PHF23Q9BUL5 403 aaPredicted RBP21.43■■□□□ 1.02
NREP-211ENST00000504018 FOXD1Q16676 465 aa20.25■□□□□ 0.83
NREP-211ENST00000504018 PLPPR3Q6T4P5 718 aa19.31■□□□□ 0.68
NREP-211ENST00000504018 MSH5O43196 834 aa18.94■□□□□ 0.62
NREP-211ENST00000504018 PIAS4Q8N2W9 510 aaPredicted RBP18.93■□□□□ 0.62
NREP-211ENST00000504018 PPP6R1Q9UPN7 881 aa18.93■□□□□ 0.62
NREP-211ENST00000504018 ADRA2BP18089 450 aa18.87■□□□□ 0.61
NREP-211ENST00000504018 POTEDQ86YR6 584 aa18.52■□□□□ 0.56
NREP-211ENST00000504018 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
NREP-211ENST00000504018 DMRT2Q9Y5R5 561 aa17.23■□□□□ 0.35
NREP-211ENST00000504018 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.35
NREP-211ENST00000504018 PPP4R3CPQ6ZMV5 832 aa16.93■□□□□ 0.3
NREP-211ENST00000504018 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
NREP-211ENST00000504018 HOXD11P31277 338 aaPredicted RBP16.58■□□□□ 0.24
NREP-211ENST00000504018 DCAF8L1A6NGE4 600 aa16.52■□□□□ 0.24
NREP-211ENST00000504018 RNF216Q9NWF9 866 aaPredicted RBP16.45■□□□□ 0.22
NREP-211ENST00000504018 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
NREP-211ENST00000504018 NCBP3Q53F19 620 aaKnown RBP16.25■□□□□ 0.19
NREP-211ENST00000504018 RNF39Q9H2S5 420 aa16.17■□□□□ 0.18
NREP-211ENST00000504018 NPM3O75607 178 aaKnown RBP16.06■□□□□ 0.16
NREP-211ENST00000504018 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
NREP-211ENST00000504018 C1QBPQ07021 282 aaKnown RBP15.92■□□□□ 0.14
NREP-211ENST00000504018 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.8■□□□□ 0.12
NREP-211ENST00000504018 KCNA4P22459 653 aa15.74■□□□□ 0.11
NREP-211ENST00000504018 U3KPZ7 1027 aaPredicted RBP15.49■□□□□ 0.07
NREP-211ENST00000504018 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
NREP-211ENST00000504018 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
NREP-211ENST00000504018 CAPN15O75808 1086 aa15.23■□□□□ 0.03
NREP-211ENST00000504018 DSG3P32926 999 aa15.14■□□□□ 0.01
NREP-211ENST00000504018 APLP2Q06481 763 aa15.02■□□□□ -0
NREP-211ENST00000504018 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15□□□□□ -0.01
NREP-211ENST00000504018 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
NREP-211ENST00000504018 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
NREP-211ENST00000504018 ZNF219Q9P2Y4 722 aaPredicted RBP14.95□□□□□ -0.02
NREP-211ENST00000504018 SAMD1Q6SPF0 538 aaPredicted RBP14.93□□□□□ -0.02
NREP-211ENST00000504018 ABCB7O75027 752 aa14.9□□□□□ -0.02
NREP-211ENST00000504018 MYCNP04198 464 aaPredicted RBP14.85□□□□□ -0.03
NREP-211ENST00000504018 SLC4A1APQ9BWU0 796 aaKnown RBP14.85□□□□□ -0.03
NREP-211ENST00000504018 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
NREP-211ENST00000504018 POLA2Q14181 598 aa14.57□□□□□ -0.08
NREP-211ENST00000504018 POTEHQ6S545 545 aa14.51□□□□□ -0.09
NREP-211ENST00000504018 ATF5Q9Y2D1 282 aaPredicted RBP14.51□□□□□ -0.09
NREP-211ENST00000504018 ZBTB22O15209 634 aa14.49□□□□□ -0.09
NREP-211ENST00000504018 RBM42Q9BTD8 480 aaKnown RBP14.44□□□□□ -0.1
NREP-211ENST00000504018 ZBTB12Q9Y330 459 aaPredicted RBP14.28□□□□□ -0.12
NREP-211ENST00000504018 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
NREP-211ENST00000504018 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
NREP-211ENST00000504018 CHRDL2Q6WN34 429 aa14.13□□□□□ -0.15
NREP-211ENST00000504018 AKT1S1Q96B36 256 aa14.11□□□□□ -0.15
NREP-211ENST00000504018 REM2Q8IYK8 340 aaPredicted RBP13.98□□□□□ -0.17
NREP-211ENST00000504018 FBLN2P98095 1184 aa13.92□□□□□ -0.18
NREP-211ENST00000504018 PITPNM1O00562 1244 aa13.85□□□□□ -0.19
NREP-211ENST00000504018 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
NREP-211ENST00000504018 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
NREP-211ENST00000504018 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
NREP-211ENST00000504018 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
NREP-211ENST00000504018 PIP4P2Q8N4L2 257 aa13.81□□□□□ -0.2
NREP-211ENST00000504018 CSRNP3Q8WYN3 585 aa13.79□□□□□ -0.2
NREP-211ENST00000504018 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.21
NREP-211ENST00000504018 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
NREP-211ENST00000504018 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
NREP-211ENST00000504018 EHMT2Q96KQ7 1210 aa13.63□□□□□ -0.23
NREP-211ENST00000504018 SPDYE1Q8NFV5 336 aaPredicted RBP13.6□□□□□ -0.23
NREP-211ENST00000504018 SP7Q8TDD2 431 aaPredicted RBP13.59□□□□□ -0.23
NREP-211ENST00000504018 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
NREP-211ENST00000504018 HAX1O00165 279 aa13.53□□□□□ -0.24
NREP-211ENST00000504018 PRKAR2AP13861 404 aaKnown RBP13.48□□□□□ -0.25
NREP-211ENST00000504018 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
NREP-211ENST00000504018 EVX2Q03828 476 aa13.39□□□□□ -0.27
NREP-211ENST00000504018 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
NREP-211ENST00000504018 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
NREP-211ENST00000504018 C19orf67A6NJJ6 358 aa13.28□□□□□ -0.28
NREP-211ENST00000504018 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
NREP-211ENST00000504018 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
NREP-211ENST00000504018 GABBR2O75899 941 aa13.08□□□□□ -0.32
NREP-211ENST00000504018 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
NREP-211ENST00000504018 CD44P16070 742 aaKnown RBP13.05□□□□□ -0.32
NREP-211ENST00000504018 CREBZFQ9NS37 354 aa13.03□□□□□ -0.32
NREP-211ENST00000504018 PROM2Q8N271 834 aa12.86□□□□□ -0.35
NREP-211ENST00000504018 ZNF579Q8NAF0 562 aaKnown RBP12.86□□□□□ -0.35
NREP-211ENST00000504018 ZRANB1Q9UGI0 708 aa12.86□□□□□ -0.35
NREP-211ENST00000504018 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
NREP-211ENST00000504018 CLCN6P51797 869 aa12.82□□□□□ -0.36
NREP-211ENST00000504018 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
NREP-211ENST00000504018 NPM1P06748 294 aaKnown RBP eCLIP12.77□□□□□ -0.37
NREP-211ENST00000504018 PAK3O75914 559 aaPredicted RBP12.75□□□□□ -0.37
NREP-211ENST00000504018 LHX8Q68G74 356 aa12.74□□□□□ -0.37
NREP-211ENST00000504018 DCBLD2Q96PD2 775 aa12.71□□□□□ -0.37
NREP-211ENST00000504018 PHF12Q96QT6 1004 aa12.71□□□□□ -0.37
NREP-211ENST00000504018 GALR2O43603 387 aaPredicted RBP12.7□□□□□ -0.38
NREP-211ENST00000504018 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
NREP-211ENST00000504018 MIER1Q8N108 512 aa12.54□□□□□ -0.4
NREP-211ENST00000504018 MS4A3Q96HJ5 214 aa12.54□□□□□ -0.4
NREP-211ENST00000504018 PLEKHG5O94827 1062 aa12.53□□□□□ -0.4
NREP-211ENST00000504018 FKBP8Q14318 412 aa12.52□□□□□ -0.41
NREP-211ENST00000504018 CCDC61Q9Y6R9 512 aa12.5□□□□□ -0.41
NREP-211ENST00000504018 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms