RNA–Protein interactions for RNA: ENST00000503714.1

PPARGC1A-202, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 5

Gene PPARGC1A, Length 380 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-202ENST00000503714 AEBP2Q6ZN18 517 aaPredicted RBP27.6■■■□□ 2.01
PPARGC1A-202ENST00000503714 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
PPARGC1A-202ENST00000503714 SENP3Q9H4L4 574 aaPredicted RBP23.42■■□□□ 1.34
PPARGC1A-202ENST00000503714 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
PPARGC1A-202ENST00000503714 FOXD1Q16676 465 aa21.85■■□□□ 1.09
PPARGC1A-202ENST00000503714 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
PPARGC1A-202ENST00000503714 POTEDQ86YR6 584 aa21.06■□□□□ 0.96
PPARGC1A-202ENST00000503714 PPP6R1Q9UPN7 881 aa20.65■□□□□ 0.9
PPARGC1A-202ENST00000503714 ADRA2BP18089 450 aa20.58■□□□□ 0.89
PPARGC1A-202ENST00000503714 MSH5O43196 834 aa20.48■□□□□ 0.87
PPARGC1A-202ENST00000503714 PIAS4Q8N2W9 510 aaPredicted RBP20.44■□□□□ 0.86
PPARGC1A-202ENST00000503714 MAPK8IP2Q13387 824 aaPredicted RBP18.85■□□□□ 0.61
PPARGC1A-202ENST00000503714 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
PPARGC1A-202ENST00000503714 DMRT2Q9Y5R5 561 aa18.64■□□□□ 0.57
PPARGC1A-202ENST00000503714 PPP4R3CPQ6ZMV5 832 aa18.61■□□□□ 0.57
PPARGC1A-202ENST00000503714 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
PPARGC1A-202ENST00000503714 HOXD11P31277 338 aaPredicted RBP18.05■□□□□ 0.48
PPARGC1A-202ENST00000503714 CACNB1Q02641 598 aaPredicted RBP18.02■□□□□ 0.48
PPARGC1A-202ENST00000503714 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
PPARGC1A-202ENST00000503714 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
PPARGC1A-202ENST00000503714 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
PPARGC1A-202ENST00000503714 NPM3O75607 178 aaKnown RBP17.72■□□□□ 0.43
PPARGC1A-202ENST00000503714 KCNA4P22459 653 aa17.61■□□□□ 0.41
PPARGC1A-202ENST00000503714 RNF39Q9H2S5 420 aa17.44■□□□□ 0.38
PPARGC1A-202ENST00000503714 DNAJC5BQ9UF47 199 aa17.35■□□□□ 0.37
PPARGC1A-202ENST00000503714 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.346e-15■□□□□ 10.1
PPARGC1A-202ENST00000503714 C1QBPQ07021 282 aaKnown RBP17.13■□□□□ 0.33
PPARGC1A-202ENST00000503714 SLC4A2P04920 1241 aa16.89■□□□□ 0.29
PPARGC1A-202ENST00000503714 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
PPARGC1A-202ENST00000503714 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
PPARGC1A-202ENST00000503714 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
PPARGC1A-202ENST00000503714 CAPN15O75808 1086 aa16.48■□□□□ 0.23
PPARGC1A-202ENST00000503714 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
PPARGC1A-202ENST00000503714 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
PPARGC1A-202ENST00000503714 POTEHQ6S545 545 aa16.38■□□□□ 0.21
PPARGC1A-202ENST00000503714 DSG3P32926 999 aa16.37■□□□□ 0.21
PPARGC1A-202ENST00000503714 MYCNP04198 464 aaPredicted RBP16.35■□□□□ 0.21
PPARGC1A-202ENST00000503714 SAMD1Q6SPF0 538 aaPredicted RBP16.34■□□□□ 0.21
PPARGC1A-202ENST00000503714 APLP2Q06481 763 aa16.33■□□□□ 0.2
PPARGC1A-202ENST00000503714 FOXD4L1Q9NU39 408 aa16.32■□□□□ 0.2
PPARGC1A-202ENST00000503714 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
PPARGC1A-202ENST00000503714 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
PPARGC1A-202ENST00000503714 ZBTB22O15209 634 aa16.23■□□□□ 0.19
PPARGC1A-202ENST00000503714 ABCB7O75027 752 aa16.15■□□□□ 0.18
PPARGC1A-202ENST00000503714 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
PPARGC1A-202ENST00000503714 POLA2Q14181 598 aa15.92■□□□□ 0.14
PPARGC1A-202ENST00000503714 ATXN8OSP0DMR3 200 aa15.78■□□□□ 0.12
PPARGC1A-202ENST00000503714 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
PPARGC1A-202ENST00000503714 EHMT2Q96KQ7 1210 aa15.58■□□□□ 0.08
PPARGC1A-202ENST00000503714 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
PPARGC1A-202ENST00000503714 ZBTB12Q9Y330 459 aaPredicted RBP15.54■□□□□ 0.08
PPARGC1A-202ENST00000503714 OSCARQ8IYS5 282 aa15.41■□□□□ 0.06
PPARGC1A-202ENST00000503714 CHRDL2Q6WN34 429 aa15.33■□□□□ 0.04
PPARGC1A-202ENST00000503714 MKRN4PQ13434 485 aaPredicted RBP15.29■□□□□ 0.04
PPARGC1A-202ENST00000503714 FBLN2P98095 1184 aa15.28■□□□□ 0.04
PPARGC1A-202ENST00000503714 AKT1S1Q96B36 256 aa15.27■□□□□ 0.04
PPARGC1A-202ENST00000503714 REM2Q8IYK8 340 aaPredicted RBP15.15■□□□□ 0.02
PPARGC1A-202ENST00000503714 SPDYE2BA6NHP3 402 aa15.13■□□□□ 0.01
PPARGC1A-202ENST00000503714 SPDYE6P0CI01 402 aa15.13■□□□□ 0.01
PPARGC1A-202ENST00000503714 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
PPARGC1A-202ENST00000503714 SP7Q8TDD2 431 aaPredicted RBP15.07■□□□□ 0
PPARGC1A-202ENST00000503714 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
PPARGC1A-202ENST00000503714 ZNF692Q9BU19 519 aaPredicted RBP14.99□□□□□ -0.01
PPARGC1A-202ENST00000503714 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
PPARGC1A-202ENST00000503714 PIP4P2Q8N4L2 257 aa14.86□□□□□ -0.03
PPARGC1A-202ENST00000503714 FXR2P51116 673 aaKnown RBP eCLIP14.81□□□□□ -0.04
PPARGC1A-202ENST00000503714 HAX1O00165 279 aa14.79□□□□□ -0.04
PPARGC1A-202ENST00000503714 PABPN1Q86U42 306 aaKnown RBP eCLIP14.79□□□□□ -0.04
PPARGC1A-202ENST00000503714 SPDYE1Q8NFV5 336 aaPredicted RBP14.79□□□□□ -0.04
PPARGC1A-202ENST00000503714 CLEC11AQ9Y240 323 aa14.76□□□□□ -0.05
PPARGC1A-202ENST00000503714 SPDYE4A6NLX3 237 aa14.65□□□□□ -0.06
PPARGC1A-202ENST00000503714 PRKAR2AP13861 404 aaKnown RBP14.59□□□□□ -0.07
PPARGC1A-202ENST00000503714 EVX2Q03828 476 aa14.57□□□□□ -0.08
PPARGC1A-202ENST00000503714 PRR29P0C7W0 189 aa14.55□□□□□ -0.08
PPARGC1A-202ENST00000503714 CHADLQ6NUI6 762 aa14.5□□□□□ -0.09
PPARGC1A-202ENST00000503714 STAG3Q9UJ98 1225 aa14.38□□□□□ -0.11
PPARGC1A-202ENST00000503714 PROM2Q8N271 834 aa14.36□□□□□ -0.11
PPARGC1A-202ENST00000503714 C19orf67A6NJJ6 358 aa14.33□□□□□ -0.12
PPARGC1A-202ENST00000503714 CREBZFQ9NS37 354 aa14.3□□□□□ -0.12
PPARGC1A-202ENST00000503714 FARP1Q9Y4F1 1045 aaPredicted RBP14.29□□□□□ -0.12
PPARGC1A-202ENST00000503714 GABBR2O75899 941 aa14.17□□□□□ -0.14
PPARGC1A-202ENST00000503714 FKBP8Q14318 412 aa14.17□□□□□ -0.14
PPARGC1A-202ENST00000503714 LHX8Q68G74 356 aa14.15□□□□□ -0.14
PPARGC1A-202ENST00000503714 CD44P16070 742 aaKnown RBP14.13□□□□□ -0.15
PPARGC1A-202ENST00000503714 MNX1P50219 401 aaPredicted RBP14.1□□□□□ -0.15
PPARGC1A-202ENST00000503714 NPM1P06748 294 aaKnown RBP eCLIP13.97□□□□□ -0.17
PPARGC1A-202ENST00000503714 ZRANB1Q9UGI0 708 aa13.97□□□□□ -0.17
PPARGC1A-202ENST00000503714 ZNF579Q8NAF0 562 aaKnown RBP13.94□□□□□ -0.18
PPARGC1A-202ENST00000503714 MIER1Q8N108 512 aa13.93□□□□□ -0.18
PPARGC1A-202ENST00000503714 POTEIP0CG38 1075 aa13.88□□□□□ -0.19
PPARGC1A-202ENST00000503714 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
PPARGC1A-202ENST00000503714 CLCN6P51797 869 aa13.84□□□□□ -0.19
PPARGC1A-202ENST00000503714 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
PPARGC1A-202ENST00000503714 PLEKHG5O94827 1062 aa13.83□□□□□ -0.2
PPARGC1A-202ENST00000503714 PHF12Q96QT6 1004 aa13.83□□□□□ -0.2
PPARGC1A-202ENST00000503714 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
PPARGC1A-202ENST00000503714 GALR2O43603 387 aaPredicted RBP13.77□□□□□ -0.21
PPARGC1A-202ENST00000503714 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
PPARGC1A-202ENST00000503714 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
PPARGC1A-202ENST00000503714 RASEFQ8IZ41 740 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms