RNA–Protein interactions for RNA: ENST00000503446.1

CXCL6-202, Transcript of C-X-C motif chemokine ligand 6, humanhuman

TSL 4

Gene CXCL6, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL6-202ENST00000503446 AEBP2Q6ZN18 517 aaPredicted RBP29.5■■■□□ 2.31
CXCL6-202ENST00000503446 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
CXCL6-202ENST00000503446 SENP3Q9H4L4 574 aaPredicted RBP25.35■■□□□ 1.65
CXCL6-202ENST00000503446 PHF23Q9BUL5 403 aaPredicted RBP24.93■■□□□ 1.58
CXCL6-202ENST00000503446 FOXD1Q16676 465 aa23.68■■□□□ 1.38
CXCL6-202ENST00000503446 POTEDQ86YR6 584 aa23.06■■□□□ 1.28
CXCL6-202ENST00000503446 MSH5O43196 834 aa22.48■■□□□ 1.19
CXCL6-202ENST00000503446 PIAS4Q8N2W9 510 aaPredicted RBP21.98■■□□□ 1.11
CXCL6-202ENST00000503446 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
CXCL6-202ENST00000503446 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
CXCL6-202ENST00000503446 ADRA2BP18089 450 aa21.5■■□□□ 1.03
CXCL6-202ENST00000503446 DMRT2Q9Y5R5 561 aa19.97■□□□□ 0.79
CXCL6-202ENST00000503446 MAPK8IP2Q13387 824 aaPredicted RBP19.96■□□□□ 0.79
CXCL6-202ENST00000503446 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.76
CXCL6-202ENST00000503446 CACNB1Q02641 598 aaPredicted RBP19.71■□□□□ 0.75
CXCL6-202ENST00000503446 DCAF8L1A6NGE4 600 aa19.24■□□□□ 0.67
CXCL6-202ENST00000503446 RNF39Q9H2S5 420 aa19.07■□□□□ 0.64
CXCL6-202ENST00000503446 HOXD11P31277 338 aaPredicted RBP18.97■□□□□ 0.63
CXCL6-202ENST00000503446 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
CXCL6-202ENST00000503446 C1QBPQ07021 282 aaKnown RBP18.8■□□□□ 0.6
CXCL6-202ENST00000503446 CNKSR2Q8WXI2 1034 aa18.67■□□□□ 0.58
CXCL6-202ENST00000503446 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
CXCL6-202ENST00000503446 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
CXCL6-202ENST00000503446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.12■□□□□ 0.49
CXCL6-202ENST00000503446 NCBP3Q53F19 620 aaKnown RBP17.97■□□□□ 0.47
CXCL6-202ENST00000503446 POTEHQ6S545 545 aa17.95■□□□□ 0.46
CXCL6-202ENST00000503446 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
CXCL6-202ENST00000503446 DSG3P32926 999 aa17.64■□□□□ 0.41
CXCL6-202ENST00000503446 CAPN15O75808 1086 aa17.62■□□□□ 0.41
CXCL6-202ENST00000503446 U3KPZ7 1027 aaPredicted RBP17.6■□□□□ 0.41
CXCL6-202ENST00000503446 SPINK5Q9NQ38 1064 aaPredicted RBP17.56■□□□□ 0.4
CXCL6-202ENST00000503446 TRHP20396 242 aaPredicted RBP17.16■□□□□ 0.34
CXCL6-202ENST00000503446 APLP2Q06481 763 aa17.15■□□□□ 0.34
CXCL6-202ENST00000503446 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
CXCL6-202ENST00000503446 ABCB7O75027 752 aa17.1■□□□□ 0.33
CXCL6-202ENST00000503446 SLC4A2P04920 1241 aa17■□□□□ 0.31
CXCL6-202ENST00000503446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
CXCL6-202ENST00000503446 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
CXCL6-202ENST00000503446 RBM42Q9BTD8 480 aaKnown RBP16.9■□□□□ 0.3
CXCL6-202ENST00000503446 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
CXCL6-202ENST00000503446 CHRDL2Q6WN34 429 aa16.76■□□□□ 0.27
CXCL6-202ENST00000503446 KCNA4P22459 653 aa16.67■□□□□ 0.26
CXCL6-202ENST00000503446 POLA2Q14181 598 aa16.54■□□□□ 0.24
CXCL6-202ENST00000503446 SP7Q8TDD2 431 aaPredicted RBP16.5■□□□□ 0.23
CXCL6-202ENST00000503446 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
CXCL6-202ENST00000503446 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
CXCL6-202ENST00000503446 PIP4P2Q8N4L2 257 aa16.2■□□□□ 0.18
CXCL6-202ENST00000503446 ZBTB12Q9Y330 459 aaPredicted RBP16.18■□□□□ 0.18
CXCL6-202ENST00000503446 REM2Q8IYK8 340 aaPredicted RBP16.17■□□□□ 0.18
CXCL6-202ENST00000503446 HAX1O00165 279 aa16.15■□□□□ 0.18
CXCL6-202ENST00000503446 FXR2P51116 673 aaKnown RBP eCLIP16.01■□□□□ 0.15
CXCL6-202ENST00000503446 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
CXCL6-202ENST00000503446 OSCARQ8IYS5 282 aa15.99■□□□□ 0.15
CXCL6-202ENST00000503446 ATF5Q9Y2D1 282 aaPredicted RBP15.98■□□□□ 0.15
CXCL6-202ENST00000503446 EVX2Q03828 476 aa15.82■□□□□ 0.12
CXCL6-202ENST00000503446 FOXD4L1Q9NU39 408 aa15.81■□□□□ 0.12
CXCL6-202ENST00000503446 SLC4A1APQ9BWU0 796 aaKnown RBP15.64■□□□□ 0.09
CXCL6-202ENST00000503446 SPDYE2BA6NHP3 402 aa15.6■□□□□ 0.09
CXCL6-202ENST00000503446 SPDYE6P0CI01 402 aa15.6■□□□□ 0.09
CXCL6-202ENST00000503446 PRKAR2AP13861 404 aaKnown RBP15.6■□□□□ 0.09
CXCL6-202ENST00000503446 SPDYE2Q495Y8 402 aa15.6■□□□□ 0.09
CXCL6-202ENST00000503446 CLEC11AQ9Y240 323 aa15.53■□□□□ 0.08
CXCL6-202ENST00000503446 C19orf67A6NJJ6 358 aa15.52■□□□□ 0.08
CXCL6-202ENST00000503446 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
CXCL6-202ENST00000503446 FBLN2P98095 1184 aa15.49■□□□□ 0.07
CXCL6-202ENST00000503446 LHX8Q68G74 356 aa15.49■□□□□ 0.07
CXCL6-202ENST00000503446 GABBR2O75899 941 aa15.47■□□□□ 0.07
CXCL6-202ENST00000503446 ATXN8OSP0DMR3 200 aa15.42■□□□□ 0.06
CXCL6-202ENST00000503446 ZNF692Q9BU19 519 aaPredicted RBP15.32■□□□□ 0.04
CXCL6-202ENST00000503446 SSUH2Q9Y2M2 353 aa15.27■□□□□ 0.04
CXCL6-202ENST00000503446 ZBTB22O15209 634 aa15.26■□□□□ 0.03
CXCL6-202ENST00000503446 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
CXCL6-202ENST00000503446 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
CXCL6-202ENST00000503446 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
CXCL6-202ENST00000503446 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
CXCL6-202ENST00000503446 PLSCR2Q9NRY7 297 aa15.07■□□□□ 0
CXCL6-202ENST00000503446 CD44P16070 742 aaKnown RBP15.06■□□□□ 0
CXCL6-202ENST00000503446 CLCN6P51797 869 aa15.06■□□□□ 0
CXCL6-202ENST00000503446 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
CXCL6-202ENST00000503446 FARP1Q9Y4F1 1045 aaPredicted RBP14.98□□□□□ -0.01
CXCL6-202ENST00000503446 DCBLD2Q96PD2 775 aa14.95□□□□□ -0.02
CXCL6-202ENST00000503446 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
CXCL6-202ENST00000503446 ZRANB1Q9UGI0 708 aa14.75□□□□□ -0.05
CXCL6-202ENST00000503446 OTUD5Q96G74 571 aa14.69□□□□□ -0.06
CXCL6-202ENST00000503446 GALR2O43603 387 aaPredicted RBP14.64□□□□□ -0.07
CXCL6-202ENST00000503446 POTEMA6NI47 508 aa14.61□□□□□ -0.07
CXCL6-202ENST00000503446 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
CXCL6-202ENST00000503446 POTEB2H3BUK9 544 aa14.58□□□□□ -0.08
CXCL6-202ENST00000503446 STAG3Q9UJ98 1225 aa14.55□□□□□ -0.08
CXCL6-202ENST00000503446 POTEGQ6S5H5 508 aa14.54□□□□□ -0.08
CXCL6-202ENST00000503446 PAK3O75914 559 aaPredicted RBP14.53□□□□□ -0.08
CXCL6-202ENST00000503446 PCDH10Q9P2E7 1040 aa14.48□□□□□ -0.09
CXCL6-202ENST00000503446 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
CXCL6-202ENST00000503446 PELP1Q8IZL8 1130 aaKnown RBP14.41□□□□□ -0.1
CXCL6-202ENST00000503446 NPM1P06748 294 aaKnown RBP eCLIP14.38□□□□□ -0.11
CXCL6-202ENST00000503446 SLC39A7Q92504 469 aa14.32□□□□□ -0.12
CXCL6-202ENST00000503446 METRNQ9UJH8 293 aa14.32□□□□□ -0.12
CXCL6-202ENST00000503446 C7P10643 843 aa14.31□□□□□ -0.12
CXCL6-202ENST00000503446 MAMSTRQ6ZN01 415 aa14.31□□□□□ -0.12
CXCL6-202ENST00000503446 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms