RNA–Protein interactions for RNA: ENST00000503289.1

ARHGEF38-203, Transcript of Rho guanine nucleotide exchange factor 38, humanhuman

TSL 3

Gene ARHGEF38, Length 551 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38-203ENST00000503289 AEBP2Q6ZN18 517 aaPredicted RBP27.93■■■□□ 2.06
ARHGEF38-203ENST00000503289 CHIC1Q5VXU3 224 aa26.15■■□□□ 1.78
ARHGEF38-203ENST00000503289 SENP3Q9H4L4 574 aaPredicted RBP23.99■■□□□ 1.43
ARHGEF38-203ENST00000503289 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
ARHGEF38-203ENST00000503289 FOXD1Q16676 465 aa22.42■■□□□ 1.18
ARHGEF38-203ENST00000503289 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
ARHGEF38-203ENST00000503289 MSH5O43196 834 aa21.3■■□□□ 1
ARHGEF38-203ENST00000503289 PIAS4Q8N2W9 510 aaPredicted RBP20.79■□□□□ 0.92
ARHGEF38-203ENST00000503289 PPP6R1Q9UPN7 881 aa20.38■□□□□ 0.85
ARHGEF38-203ENST00000503289 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
ARHGEF38-203ENST00000503289 ADRA2BP18089 450 aa20.28■□□□□ 0.84
ARHGEF38-203ENST00000503289 DMRT2Q9Y5R5 561 aa18.89■□□□□ 0.61
ARHGEF38-203ENST00000503289 MAPK8IP2Q13387 824 aaPredicted RBP18.85■□□□□ 0.61
ARHGEF38-203ENST00000503289 CACNB1Q02641 598 aaPredicted RBP18.74■□□□□ 0.59
ARHGEF38-203ENST00000503289 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
ARHGEF38-203ENST00000503289 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
ARHGEF38-203ENST00000503289 RNF39Q9H2S5 420 aa18.08■□□□□ 0.48
ARHGEF38-203ENST00000503289 HOXD11P31277 338 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF38-203ENST00000503289 C1QBPQ07021 282 aaKnown RBP17.8■□□□□ 0.44
ARHGEF38-203ENST00000503289 PPP4R3CPQ6ZMV5 832 aa17.72■□□□□ 0.43
ARHGEF38-203ENST00000503289 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF38-203ENST00000503289 CNKSR2Q8WXI2 1034 aa17.56■□□□□ 0.4
ARHGEF38-203ENST00000503289 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
ARHGEF38-203ENST00000503289 POTEHQ6S545 545 aa17.12■□□□□ 0.33
ARHGEF38-203ENST00000503289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.09■□□□□ 0.33
ARHGEF38-203ENST00000503289 NCBP3Q53F19 620 aaKnown RBP16.84■□□□□ 0.29
ARHGEF38-203ENST00000503289 DSG3P32926 999 aa16.69■□□□□ 0.26
ARHGEF38-203ENST00000503289 CAPN15O75808 1086 aa16.64■□□□□ 0.25
ARHGEF38-203ENST00000503289 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
ARHGEF38-203ENST00000503289 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
ARHGEF38-203ENST00000503289 NPM3O75607 178 aaKnown RBP16.56■□□□□ 0.24
ARHGEF38-203ENST00000503289 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
ARHGEF38-203ENST00000503289 ABCB7O75027 752 aa16.16■□□□□ 0.18
ARHGEF38-203ENST00000503289 APLP2Q06481 763 aa16.14■□□□□ 0.17
ARHGEF38-203ENST00000503289 ZNF219Q9P2Y4 722 aaPredicted RBP16.14■□□□□ 0.17
ARHGEF38-203ENST00000503289 SLC4A2P04920 1241 aa15.99■□□□□ 0.15
ARHGEF38-203ENST00000503289 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
ARHGEF38-203ENST00000503289 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.94■□□□□ 0.14
ARHGEF38-203ENST00000503289 HNRNPUL2Q1KMD3 747 aaKnown RBP15.94■□□□□ 0.14
ARHGEF38-203ENST00000503289 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
ARHGEF38-203ENST00000503289 SAMD1Q6SPF0 538 aaPredicted RBP15.8■□□□□ 0.12
ARHGEF38-203ENST00000503289 SP7Q8TDD2 431 aaPredicted RBP15.7■□□□□ 0.1
ARHGEF38-203ENST00000503289 POLA2Q14181 598 aa15.58■□□□□ 0.08
ARHGEF38-203ENST00000503289 KCNA4P22459 653 aa15.57■□□□□ 0.08
ARHGEF38-203ENST00000503289 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
ARHGEF38-203ENST00000503289 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF38-203ENST00000503289 PIP4P2Q8N4L2 257 aa15.35■□□□□ 0.05
ARHGEF38-203ENST00000503289 HAX1O00165 279 aa15.3■□□□□ 0.04
ARHGEF38-203ENST00000503289 REM2Q8IYK8 340 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF38-203ENST00000503289 ZBTB12Q9Y330 459 aaPredicted RBP15.23■□□□□ 0.03
ARHGEF38-203ENST00000503289 FXR2P51116 673 aaKnown RBP eCLIP15.14■□□□□ 0.01
ARHGEF38-203ENST00000503289 PITPNM1O00562 1244 aa15.12■□□□□ 0.01
ARHGEF38-203ENST00000503289 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
ARHGEF38-203ENST00000503289 ATF5Q9Y2D1 282 aaPredicted RBP15.02■□□□□ -0
ARHGEF38-203ENST00000503289 EVX2Q03828 476 aa15.01□□□□□ -0.01
ARHGEF38-203ENST00000503289 FOXD4L1Q9NU39 408 aa14.79□□□□□ -0.04
ARHGEF38-203ENST00000503289 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
ARHGEF38-203ENST00000503289 LHX8Q68G74 356 aa14.73□□□□□ -0.05
ARHGEF38-203ENST00000503289 C19orf67A6NJJ6 358 aa14.69□□□□□ -0.06
ARHGEF38-203ENST00000503289 SPDYE2BA6NHP3 402 aa14.68□□□□□ -0.06
ARHGEF38-203ENST00000503289 SPDYE6P0CI01 402 aa14.68□□□□□ -0.06
ARHGEF38-203ENST00000503289 SPDYE2Q495Y8 402 aa14.68□□□□□ -0.06
ARHGEF38-203ENST00000503289 GABBR2O75899 941 aa14.66□□□□□ -0.06
ARHGEF38-203ENST00000503289 CLEC11AQ9Y240 323 aa14.63□□□□□ -0.07
ARHGEF38-203ENST00000503289 SPDYE1Q8NFV5 336 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF38-203ENST00000503289 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
ARHGEF38-203ENST00000503289 FBLN2P98095 1184 aa14.54□□□□□ -0.08
ARHGEF38-203ENST00000503289 ATXN8OSP0DMR3 200 aa14.41□□□□□ -0.1
ARHGEF38-203ENST00000503289 CHADLQ6NUI6 762 aa14.41□□□□□ -0.1
ARHGEF38-203ENST00000503289 PLSCR2Q9NRY7 297 aa14.41□□□□□ -0.1
ARHGEF38-203ENST00000503289 ZNF692Q9BU19 519 aaPredicted RBP14.4□□□□□ -0.1
ARHGEF38-203ENST00000503289 SSUH2Q9Y2M2 353 aa14.38□□□□□ -0.11
ARHGEF38-203ENST00000503289 POTEIP0CG38 1075 aa14.32□□□□□ -0.12
ARHGEF38-203ENST00000503289 PRR29P0C7W0 189 aa14.29□□□□□ -0.12
ARHGEF38-203ENST00000503289 ZBTB22O15209 634 aa14.28□□□□□ -0.12
ARHGEF38-203ENST00000503289 MKRN4PQ13434 485 aaPredicted RBP14.28□□□□□ -0.12
ARHGEF38-203ENST00000503289 CD44P16070 742 aaKnown RBP14.23□□□□□ -0.13
ARHGEF38-203ENST00000503289 CLCN6P51797 869 aa14.21□□□□□ -0.13
ARHGEF38-203ENST00000503289 PABPN1Q86U42 306 aaKnown RBP eCLIP14.15□□□□□ -0.14
ARHGEF38-203ENST00000503289 DCBLD2Q96PD2 775 aa14.14□□□□□ -0.15
ARHGEF38-203ENST00000503289 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
ARHGEF38-203ENST00000503289 ZNF579Q8NAF0 562 aaKnown RBP13.97□□□□□ -0.17
ARHGEF38-203ENST00000503289 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
ARHGEF38-203ENST00000503289 ZRANB1Q9UGI0 708 aa13.92□□□□□ -0.18
ARHGEF38-203ENST00000503289 POTEMA6NI47 508 aa13.9□□□□□ -0.18
ARHGEF38-203ENST00000503289 GALR2O43603 387 aaPredicted RBP13.84□□□□□ -0.19
ARHGEF38-203ENST00000503289 POTEGQ6S5H5 508 aa13.84□□□□□ -0.19
ARHGEF38-203ENST00000503289 POTEB2H3BUK9 544 aa13.83□□□□□ -0.2
ARHGEF38-203ENST00000503289 PCDH10Q9P2E7 1040 aa13.74□□□□□ -0.21
ARHGEF38-203ENST00000503289 CREBZFQ9NS37 354 aa13.72□□□□□ -0.21
ARHGEF38-203ENST00000503289 PAK3O75914 559 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF38-203ENST00000503289 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
ARHGEF38-203ENST00000503289 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
ARHGEF38-203ENST00000503289 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
ARHGEF38-203ENST00000503289 METRNQ9UJH8 293 aa13.56□□□□□ -0.24
ARHGEF38-203ENST00000503289 MAMSTRQ6ZN01 415 aa13.53□□□□□ -0.24
ARHGEF38-203ENST00000503289 SLC39A7Q92504 469 aa13.52□□□□□ -0.25
ARHGEF38-203ENST00000503289 C7P10643 843 aa13.51□□□□□ -0.25
ARHGEF38-203ENST00000503289 ASTLQ6HA08 431 aaPredicted RBP13.51□□□□□ -0.25
ARHGEF38-203ENST00000503289 NPM1P06748 294 aaKnown RBP eCLIP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms