RNA–Protein interactions for RNA: ENST00000503148.1

TMA16-202, Transcript of translation machinery associated 16 homolog, humanhuman

TSL 2

Gene TMA16, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMA16-202ENST00000503148 AEBP2Q6ZN18 517 aaPredicted RBP25.1■■□□□ 1.61
TMA16-202ENST00000503148 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
TMA16-202ENST00000503148 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.05
TMA16-202ENST00000503148 PHF23Q9BUL5 403 aaPredicted RBP21.21■□□□□ 0.99
TMA16-202ENST00000503148 FOXD1Q16676 465 aa20.04■□□□□ 0.8
TMA16-202ENST00000503148 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
TMA16-202ENST00000503148 MSH5O43196 834 aa18.94■□□□□ 0.62
TMA16-202ENST00000503148 PIAS4Q8N2W9 510 aaPredicted RBP18.73■□□□□ 0.59
TMA16-202ENST00000503148 POTEDQ86YR6 584 aa18.7■□□□□ 0.58
TMA16-202ENST00000503148 PPP6R1Q9UPN7 881 aa18.55■□□□□ 0.56
TMA16-202ENST00000503148 ADRA2BP18089 450 aa18.5■□□□□ 0.55
TMA16-202ENST00000503148 SCAF1Q9H7N4 1312 aaKnown RBP17.08■□□□□ 0.32
TMA16-202ENST00000503148 DMRT2Q9Y5R5 561 aa17.05■□□□□ 0.32
TMA16-202ENST00000503148 MAPK8IP2Q13387 824 aaPredicted RBP17.02■□□□□ 0.32
TMA16-202ENST00000503148 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
TMA16-202ENST00000503148 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
TMA16-202ENST00000503148 DCAF8L1A6NGE4 600 aa16.35■□□□□ 0.21
TMA16-202ENST00000503148 HOXD11P31277 338 aaPredicted RBP16.34■□□□□ 0.21
TMA16-202ENST00000503148 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
TMA16-202ENST00000503148 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
TMA16-202ENST00000503148 RNF216Q9NWF9 866 aaPredicted RBP16.23■□□□□ 0.19
TMA16-202ENST00000503148 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
TMA16-202ENST00000503148 NPM3O75607 178 aaKnown RBP15.91■□□□□ 0.14
TMA16-202ENST00000503148 C1QBPQ07021 282 aaKnown RBP15.9■□□□□ 0.14
TMA16-202ENST00000503148 DNAJC5BQ9UF47 199 aa15.9■□□□□ 0.14
TMA16-202ENST00000503148 KCNA4P22459 653 aa15.75■□□□□ 0.11
TMA16-202ENST00000503148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.6■□□□□ 0.09
TMA16-202ENST00000503148 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
TMA16-202ENST00000503148 SLC4A2P04920 1241 aa15.12■□□□□ 0.01
TMA16-202ENST00000503148 CAPN15O75808 1086 aa15.05■□□□□ -0
TMA16-202ENST00000503148 SPINK5Q9NQ38 1064 aaPredicted RBP15□□□□□ -0.01
TMA16-202ENST00000503148 DSG3P32926 999 aa14.99□□□□□ -0.01
TMA16-202ENST00000503148 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
TMA16-202ENST00000503148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.92□□□□□ -0.02
TMA16-202ENST00000503148 APLP2Q06481 763 aa14.92□□□□□ -0.02
TMA16-202ENST00000503148 HNRNPUL2Q1KMD3 747 aaKnown RBP14.92□□□□□ -0.02
TMA16-202ENST00000503148 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
TMA16-202ENST00000503148 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
TMA16-202ENST00000503148 MYCNP04198 464 aaPredicted RBP14.77□□□□□ -0.05
TMA16-202ENST00000503148 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
TMA16-202ENST00000503148 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
TMA16-202ENST00000503148 POTEHQ6S545 545 aa14.65□□□□□ -0.06
TMA16-202ENST00000503148 ABCB7O75027 752 aa14.63□□□□□ -0.07
TMA16-202ENST00000503148 ZBTB22O15209 634 aa14.44□□□□□ -0.1
TMA16-202ENST00000503148 RBM42Q9BTD8 480 aaKnown RBP14.41□□□□□ -0.1
TMA16-202ENST00000503148 POLA2Q14181 598 aa14.35□□□□□ -0.11
TMA16-202ENST00000503148 ATF5Q9Y2D1 282 aaPredicted RBP14.31□□□□□ -0.12
TMA16-202ENST00000503148 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
TMA16-202ENST00000503148 ZBTB12Q9Y330 459 aaPredicted RBP14.16□□□□□ -0.14
TMA16-202ENST00000503148 CHRDL2Q6WN34 429 aa14.09□□□□□ -0.15
TMA16-202ENST00000503148 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
TMA16-202ENST00000503148 CSRNP3Q8WYN3 585 aa13.97□□□□□ -0.17
TMA16-202ENST00000503148 EHMT2Q96KQ7 1210 aa13.93□□□□□ -0.18
TMA16-202ENST00000503148 FBLN2P98095 1184 aa13.88□□□□□ -0.19
TMA16-202ENST00000503148 OSCARQ8IYS5 282 aa13.88□□□□□ -0.19
TMA16-202ENST00000503148 REM2Q8IYK8 340 aaPredicted RBP13.82□□□□□ -0.2
TMA16-202ENST00000503148 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
TMA16-202ENST00000503148 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
TMA16-202ENST00000503148 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
TMA16-202ENST00000503148 MKRN4PQ13434 485 aaPredicted RBP13.68□□□□□ -0.22
TMA16-202ENST00000503148 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
TMA16-202ENST00000503148 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
TMA16-202ENST00000503148 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
TMA16-202ENST00000503148 FXR2P51116 673 aaKnown RBP eCLIP13.6□□□□□ -0.23
TMA16-202ENST00000503148 ZNF692Q9BU19 519 aaPredicted RBP13.55□□□□□ -0.24
TMA16-202ENST00000503148 HAX1O00165 279 aa13.52□□□□□ -0.25
TMA16-202ENST00000503148 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
TMA16-202ENST00000503148 SPDYE1Q8NFV5 336 aaPredicted RBP13.43□□□□□ -0.26
TMA16-202ENST00000503148 CLEC11AQ9Y240 323 aa13.37□□□□□ -0.27
TMA16-202ENST00000503148 PABPN1Q86U42 306 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMA16-202ENST00000503148 PRKAR2AP13861 404 aaKnown RBP13.32□□□□□ -0.28
TMA16-202ENST00000503148 EVX2Q03828 476 aa13.24□□□□□ -0.29
TMA16-202ENST00000503148 SPDYE4A6NLX3 237 aa13.19□□□□□ -0.3
TMA16-202ENST00000503148 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
TMA16-202ENST00000503148 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
TMA16-202ENST00000503148 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
TMA16-202ENST00000503148 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
TMA16-202ENST00000503148 GABBR2O75899 941 aa13□□□□□ -0.33
TMA16-202ENST00000503148 FARP1Q9Y4F1 1045 aaPredicted RBP12.92□□□□□ -0.34
TMA16-202ENST00000503148 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
TMA16-202ENST00000503148 CLCN6P51797 869 aa12.88□□□□□ -0.35
TMA16-202ENST00000503148 PROM2Q8N271 834 aa12.86□□□□□ -0.35
TMA16-202ENST00000503148 CREBZFQ9NS37 354 aa12.85□□□□□ -0.35
TMA16-202ENST00000503148 LHX8Q68G74 356 aa12.81□□□□□ -0.36
TMA16-202ENST00000503148 NPM1P06748 294 aaKnown RBP eCLIP12.71□□□□□ -0.37
TMA16-202ENST00000503148 FKBP8Q14318 412 aa12.71□□□□□ -0.37
TMA16-202ENST00000503148 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
TMA16-202ENST00000503148 ZRANB1Q9UGI0 708 aa12.68□□□□□ -0.38
TMA16-202ENST00000503148 POTEIP0CG38 1075 aa12.67□□□□□ -0.38
TMA16-202ENST00000503148 DCBLD2Q96PD2 775 aa12.67□□□□□ -0.38
TMA16-202ENST00000503148 PAK3O75914 559 aaPredicted RBP12.65□□□□□ -0.38
TMA16-202ENST00000503148 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
TMA16-202ENST00000503148 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
TMA16-202ENST00000503148 MIER1Q8N108 512 aa12.59□□□□□ -0.39
TMA16-202ENST00000503148 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
TMA16-202ENST00000503148 GALR2O43603 387 aaPredicted RBP12.5□□□□□ -0.41
TMA16-202ENST00000503148 ZBTB47Q9UFB7 747 aaPredicted RBP12.46□□□□□ -0.41
TMA16-202ENST00000503148 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
TMA16-202ENST00000503148 PHF12Q96QT6 1004 aa12.45□□□□□ -0.42
TMA16-202ENST00000503148 TSPYL2Q9H2G4 693 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 337.1 ms