RNA–Protein interactions for RNA: ENST00000503080.1

UBE2B-203, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-203ENST00000503080 AEBP2Q6ZN18 517 aaPredicted RBP25.53■■□□□ 1.68
UBE2B-203ENST00000503080 CHIC1Q5VXU3 224 aa24.71■■□□□ 1.55
UBE2B-203ENST00000503080 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
UBE2B-203ENST00000503080 SENP3Q9H4L4 574 aaPredicted RBP21.69■■□□□ 1.06
UBE2B-203ENST00000503080 FOXD1Q16676 465 aa20.16■□□□□ 0.82
UBE2B-203ENST00000503080 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
UBE2B-203ENST00000503080 PPP6R1Q9UPN7 881 aa19.26■□□□□ 0.67
UBE2B-203ENST00000503080 ADRA2BP18089 450 aa19.23■□□□□ 0.67
UBE2B-203ENST00000503080 PIAS4Q8N2W9 510 aaPredicted RBP18.97■□□□□ 0.63
UBE2B-203ENST00000503080 MSH5O43196 834 aa18.67■□□□□ 0.58
UBE2B-203ENST00000503080 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
UBE2B-203ENST00000503080 SCAF1Q9H7N4 1312 aaKnown RBP17.57■□□□□ 0.4
UBE2B-203ENST00000503080 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
UBE2B-203ENST00000503080 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
UBE2B-203ENST00000503080 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
UBE2B-203ENST00000503080 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
UBE2B-203ENST00000503080 NCBP3Q53F19 620 aaKnown RBP17.05■□□□□ 0.32
UBE2B-203ENST00000503080 KCNA4P22459 653 aa16.94■□□□□ 0.3
UBE2B-203ENST00000503080 RNF216Q9NWF9 866 aaPredicted RBP16.84■□□□□ 0.29
UBE2B-203ENST00000503080 HOXD11P31277 338 aaPredicted RBP16.83■□□□□ 0.28
UBE2B-203ENST00000503080 NPM3O75607 178 aaKnown RBP16.81■□□□□ 0.28
UBE2B-203ENST00000503080 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.24
UBE2B-203ENST00000503080 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
UBE2B-203ENST00000503080 SLC4A1APQ9BWU0 796 aaKnown RBP16.08■□□□□ 0.16
UBE2B-203ENST00000503080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.07■□□□□ 0.16
UBE2B-203ENST00000503080 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
UBE2B-203ENST00000503080 SLC4A2P04920 1241 aa15.92■□□□□ 0.14
UBE2B-203ENST00000503080 C1QBPQ07021 282 aaKnown RBP15.78■□□□□ 0.12
UBE2B-203ENST00000503080 U3KPZ7 1027 aaPredicted RBP15.76■□□□□ 0.11
UBE2B-203ENST00000503080 CACNB1Q02641 598 aaPredicted RBP15.74■□□□□ 0.11
UBE2B-203ENST00000503080 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
UBE2B-203ENST00000503080 ZBTB22O15209 634 aa15.57■□□□□ 0.08
UBE2B-203ENST00000503080 MYCNP04198 464 aaPredicted RBP15.53■□□□□ 0.08
UBE2B-203ENST00000503080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
UBE2B-203ENST00000503080 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
UBE2B-203ENST00000503080 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
UBE2B-203ENST00000503080 SPINK5Q9NQ38 1064 aaPredicted RBP15.41■□□□□ 0.06
UBE2B-203ENST00000503080 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
UBE2B-203ENST00000503080 APLP2Q06481 763 aa15.37■□□□□ 0.05
UBE2B-203ENST00000503080 CAPN15O75808 1086 aa15.36■□□□□ 0.05
UBE2B-203ENST00000503080 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
UBE2B-203ENST00000503080 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
UBE2B-203ENST00000503080 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
UBE2B-203ENST00000503080 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
UBE2B-203ENST00000503080 DSG3P32926 999 aa15.14■□□□□ 0.01
UBE2B-203ENST00000503080 ATXN8OSP0DMR3 200 aa15.1■□□□□ 0.01
UBE2B-203ENST00000503080 ABCB7O75027 752 aa15.05■□□□□ -0
UBE2B-203ENST00000503080 POLA2Q14181 598 aa14.94□□□□□ -0.02
UBE2B-203ENST00000503080 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
UBE2B-203ENST00000503080 FBLN2P98095 1184 aa14.52□□□□□ -0.09
UBE2B-203ENST00000503080 MKRN4PQ13434 485 aaPredicted RBP14.47□□□□□ -0.09
UBE2B-203ENST00000503080 OSCARQ8IYS5 282 aa14.43□□□□□ -0.1
UBE2B-203ENST00000503080 RBM42Q9BTD8 480 aaKnown RBP14.42□□□□□ -0.1
UBE2B-203ENST00000503080 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
UBE2B-203ENST00000503080 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
UBE2B-203ENST00000503080 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
UBE2B-203ENST00000503080 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
UBE2B-203ENST00000503080 ZNF692Q9BU19 519 aaPredicted RBP14.18□□□□□ -0.14
UBE2B-203ENST00000503080 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
UBE2B-203ENST00000503080 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
UBE2B-203ENST00000503080 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
UBE2B-203ENST00000503080 PABPN1Q86U42 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
UBE2B-203ENST00000503080 CHRDL2Q6WN34 429 aa13.92□□□□□ -0.18
UBE2B-203ENST00000503080 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
UBE2B-203ENST00000503080 SPDYE1Q8NFV5 336 aaPredicted RBP13.88□□□□□ -0.19
UBE2B-203ENST00000503080 FKBP8Q14318 412 aa13.86□□□□□ -0.19
UBE2B-203ENST00000503080 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
UBE2B-203ENST00000503080 PROM2Q8N271 834 aa13.75□□□□□ -0.21
UBE2B-203ENST00000503080 POTEHQ6S545 545 aa13.74□□□□□ -0.21
UBE2B-203ENST00000503080 PIP4P2Q8N4L2 257 aa13.7□□□□□ -0.22
UBE2B-203ENST00000503080 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
UBE2B-203ENST00000503080 FXR2P51116 673 aaKnown RBP eCLIP13.69□□□□□ -0.22
UBE2B-203ENST00000503080 STAG3Q9UJ98 1225 aa13.68□□□□□ -0.22
UBE2B-203ENST00000503080 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
UBE2B-203ENST00000503080 CHADLQ6NUI6 762 aa13.54□□□□□ -0.24
UBE2B-203ENST00000503080 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
UBE2B-203ENST00000503080 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
UBE2B-203ENST00000503080 MIER1Q8N108 512 aa13.37□□□□□ -0.27
UBE2B-203ENST00000503080 FARP1Q9Y4F1 1045 aaPredicted RBP13.37□□□□□ -0.27
UBE2B-203ENST00000503080 HAX1O00165 279 aa13.34□□□□□ -0.27
UBE2B-203ENST00000503080 PLCD3Q8N3E9 789 aa13.31□□□□□ -0.28
UBE2B-203ENST00000503080 PLEKHG5O94827 1062 aa13.3□□□□□ -0.28
UBE2B-203ENST00000503080 MNX1P50219 401 aaPredicted RBP13.29□□□□□ -0.28
UBE2B-203ENST00000503080 C19orf67A6NJJ6 358 aa13.23□□□□□ -0.29
UBE2B-203ENST00000503080 VASPP50552 380 aaPredicted RBP13.23□□□□□ -0.29
UBE2B-203ENST00000503080 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBE2B-203ENST00000503080 EVX2Q03828 476 aa13.2□□□□□ -0.3
UBE2B-203ENST00000503080 CD44P16070 742 aaKnown RBP13.16□□□□□ -0.3
UBE2B-203ENST00000503080 ZBTB47Q9UFB7 747 aaPredicted RBP13.16□□□□□ -0.3
UBE2B-203ENST00000503080 SP7Q8TDD2 431 aaPredicted RBP13.1□□□□□ -0.31
UBE2B-203ENST00000503080 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
UBE2B-203ENST00000503080 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
UBE2B-203ENST00000503080 PAK3O75914 559 aaPredicted RBP13.06□□□□□ -0.32
UBE2B-203ENST00000503080 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
UBE2B-203ENST00000503080 NUBP1P53384 320 aa13.02□□□□□ -0.33
UBE2B-203ENST00000503080 RASEFQ8IZ41 740 aa13.02□□□□□ -0.33
UBE2B-203ENST00000503080 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.33
UBE2B-203ENST00000503080 ZNF579Q8NAF0 562 aaKnown RBP12.97□□□□□ -0.33
UBE2B-203ENST00000503080 GABBR2O75899 941 aa12.93□□□□□ -0.34
UBE2B-203ENST00000503080 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms