RNA–Protein interactions for RNA: ENST00000502461.1

CENPU-202, Transcript of centromere protein U, humanhuman

TSL 2

Gene CENPU, Length 723 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPU-202ENST00000502461 AEBP2Q6ZN18 517 aaPredicted RBP33.99■■■■□ 3.03
CENPU-202ENST00000502461 CHIC1Q5VXU3 224 aa32.45■■■□□ 2.79
CENPU-202ENST00000502461 SENP3Q9H4L4 574 aaPredicted RBP29.03■■■□□ 2.24
CENPU-202ENST00000502461 PHF23Q9BUL5 403 aaPredicted RBP28.68■■■□□ 2.18
CENPU-202ENST00000502461 FOXD1Q16676 465 aa27.01■■□□□ 1.91
CENPU-202ENST00000502461 PLPPR3Q6T4P5 718 aa26.04■■□□□ 1.76
CENPU-202ENST00000502461 PPP6R1Q9UPN7 881 aa25.37■■□□□ 1.65
CENPU-202ENST00000502461 ADRA2BP18089 450 aa25.34■■□□□ 1.65
CENPU-202ENST00000502461 PIAS4Q8N2W9 510 aaPredicted RBP25.34■■□□□ 1.65
CENPU-202ENST00000502461 MSH5O43196 834 aa25.26■■□□□ 1.63
CENPU-202ENST00000502461 POTEDQ86YR6 584 aa24.37■■□□□ 1.49
CENPU-202ENST00000502461 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
CENPU-202ENST00000502461 MAPK8IP2Q13387 824 aaPredicted RBP23.23■■□□□ 1.31
CENPU-202ENST00000502461 DMRT2Q9Y5R5 561 aa23.02■■□□□ 1.28
CENPU-202ENST00000502461 PPP4R3CPQ6ZMV5 832 aa22.85■■□□□ 1.25
CENPU-202ENST00000502461 CNKSR2Q8WXI2 1034 aa22.38■■□□□ 1.17
CENPU-202ENST00000502461 DCAF8L1A6NGE4 600 aa22.23■■□□□ 1.15
CENPU-202ENST00000502461 HOXD11P31277 338 aaPredicted RBP22.2■■□□□ 1.14
CENPU-202ENST00000502461 RNF216Q9NWF9 866 aaPredicted RBP22.12■■□□□ 1.13
CENPU-202ENST00000502461 NCBP3Q53F19 620 aaKnown RBP22.07■■□□□ 1.12
CENPU-202ENST00000502461 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
CENPU-202ENST00000502461 CACNB1Q02641 598 aaPredicted RBP21.64■■□□□ 1.05
CENPU-202ENST00000502461 RNF39Q9H2S5 420 aa21.52■■□□□ 1.04
CENPU-202ENST00000502461 KCNA4P22459 653 aa21.41■■□□□ 1.02
CENPU-202ENST00000502461 DNAJC5BQ9UF47 199 aa21.37■■□□□ 1.01
CENPU-202ENST00000502461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 1
CENPU-202ENST00000502461 C1QBPQ07021 282 aaKnown RBP21.25■□□□□ 0.99
CENPU-202ENST00000502461 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
CENPU-202ENST00000502461 SLC4A2P04920 1241 aa20.63■□□□□ 0.89
CENPU-202ENST00000502461 CAPN15O75808 1086 aa20.47■□□□□ 0.87
CENPU-202ENST00000502461 SPINK5Q9NQ38 1064 aaPredicted RBP20.44■□□□□ 0.86
CENPU-202ENST00000502461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
CENPU-202ENST00000502461 APLP2Q06481 763 aa20.29■□□□□ 0.84
CENPU-202ENST00000502461 HNRNPUL2Q1KMD3 747 aaKnown RBP20.29■□□□□ 0.84
CENPU-202ENST00000502461 SLC4A1APQ9BWU0 796 aaKnown RBP20.28■□□□□ 0.84
CENPU-202ENST00000502461 DSG3P32926 999 aa20.22■□□□□ 0.83
CENPU-202ENST00000502461 TRHP20396 242 aaPredicted RBP20.19■□□□□ 0.82
CENPU-202ENST00000502461 SAMD1Q6SPF0 538 aaPredicted RBP20.17■□□□□ 0.82
CENPU-202ENST00000502461 ZNF219Q9P2Y4 722 aaPredicted RBP20.1■□□□□ 0.81
CENPU-202ENST00000502461 MYCNP04198 464 aaPredicted RBP20.07■□□□□ 0.8
CENPU-202ENST00000502461 ABCB7O75027 752 aa20■□□□□ 0.79
CENPU-202ENST00000502461 FOXD4L1Q9NU39 408 aa19.94■□□□□ 0.78
CENPU-202ENST00000502461 ZBTB22O15209 634 aa19.64■□□□□ 0.73
CENPU-202ENST00000502461 POLA2Q14181 598 aa19.64■□□□□ 0.73
CENPU-202ENST00000502461 ATF5Q9Y2D1 282 aaPredicted RBP19.57■□□□□ 0.72
CENPU-202ENST00000502461 RBM42Q9BTD8 480 aaKnown RBP19.34■□□□□ 0.69
CENPU-202ENST00000502461 ATXN8OSP0DMR3 200 aa19.29■□□□□ 0.68
CENPU-202ENST00000502461 ZBTB12Q9Y330 459 aaPredicted RBP19.26■□□□□ 0.67
CENPU-202ENST00000502461 POTEHQ6S545 545 aa19.15■□□□□ 0.66
CENPU-202ENST00000502461 OSCARQ8IYS5 282 aa18.99■□□□□ 0.63
CENPU-202ENST00000502461 AKT1S1Q96B36 256 aa18.91■□□□□ 0.62
CENPU-202ENST00000502461 CSRNP3Q8WYN3 585 aa18.9■□□□□ 0.62
CENPU-202ENST00000502461 FBLN2P98095 1184 aa18.89■□□□□ 0.61
CENPU-202ENST00000502461 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
CENPU-202ENST00000502461 CHRDL2Q6WN34 429 aa18.84■□□□□ 0.61
CENPU-202ENST00000502461 REM2Q8IYK8 340 aaPredicted RBP18.74■□□□□ 0.59
CENPU-202ENST00000502461 SPDYE2BA6NHP3 402 aa18.65■□□□□ 0.58
CENPU-202ENST00000502461 SPDYE6P0CI01 402 aa18.65■□□□□ 0.58
CENPU-202ENST00000502461 MKRN4PQ13434 485 aaPredicted RBP18.65■□□□□ 0.58
CENPU-202ENST00000502461 SPDYE2Q495Y8 402 aa18.65■□□□□ 0.58
CENPU-202ENST00000502461 PITPNM1O00562 1244 aa18.53■□□□□ 0.56
CENPU-202ENST00000502461 ZNF692Q9BU19 519 aaPredicted RBP18.5■□□□□ 0.55
CENPU-202ENST00000502461 PIP4P2Q8N4L2 257 aa18.42■□□□□ 0.54
CENPU-202ENST00000502461 SSUH2Q9Y2M2 353 aa18.36■□□□□ 0.53
CENPU-202ENST00000502461 CLEC11AQ9Y240 323 aa18.34■□□□□ 0.53
CENPU-202ENST00000502461 SPDYE1Q8NFV5 336 aaPredicted RBP18.31■□□□□ 0.52
CENPU-202ENST00000502461 FXR2P51116 673 aaKnown RBP eCLIP18.3■□□□□ 0.52
CENPU-202ENST00000502461 PABPN1Q86U42 306 aaKnown RBP eCLIP18.21■□□□□ 0.51
CENPU-202ENST00000502461 HAX1O00165 279 aa18.13■□□□□ 0.49
CENPU-202ENST00000502461 PRKAR2AP13861 404 aaKnown RBP18.09■□□□□ 0.49
CENPU-202ENST00000502461 PRR29P0C7W0 189 aa18.03■□□□□ 0.48
CENPU-202ENST00000502461 SP7Q8TDD2 431 aaPredicted RBP18.02■□□□□ 0.48
CENPU-202ENST00000502461 SPDYE4A6NLX3 237 aa17.93■□□□□ 0.46
CENPU-202ENST00000502461 CHADLQ6NUI6 762 aa17.92■□□□□ 0.46
CENPU-202ENST00000502461 EVX2Q03828 476 aa17.8■□□□□ 0.44
CENPU-202ENST00000502461 STAG3Q9UJ98 1225 aa17.76■□□□□ 0.43
CENPU-202ENST00000502461 C19orf67A6NJJ6 358 aa17.71■□□□□ 0.43
CENPU-202ENST00000502461 FARP1Q9Y4F1 1045 aaPredicted RBP17.64■□□□□ 0.41
CENPU-202ENST00000502461 CREBZFQ9NS37 354 aa17.54■□□□□ 0.4
CENPU-202ENST00000502461 CD44P16070 742 aaKnown RBP17.53■□□□□ 0.4
CENPU-202ENST00000502461 GABBR2O75899 941 aa17.45■□□□□ 0.38
CENPU-202ENST00000502461 PROM2Q8N271 834 aa17.39■□□□□ 0.37
CENPU-202ENST00000502461 ZRANB1Q9UGI0 708 aa17.32■□□□□ 0.36
CENPU-202ENST00000502461 NPM1P06748 294 aaKnown RBP eCLIP17.3■□□□□ 0.36
CENPU-202ENST00000502461 PAK3O75914 559 aaPredicted RBP17.25■□□□□ 0.35
CENPU-202ENST00000502461 CLCN6P51797 869 aa17.22■□□□□ 0.35
CENPU-202ENST00000502461 MNX1P50219 401 aaPredicted RBP17.21■□□□□ 0.35
CENPU-202ENST00000502461 FKBP8Q14318 412 aa17.21■□□□□ 0.35
CENPU-202ENST00000502461 ZNF579Q8NAF0 562 aaKnown RBP17.2■□□□□ 0.34
CENPU-202ENST00000502461 PLEKHG5O94827 1062 aa17.15■□□□□ 0.34
CENPU-202ENST00000502461 MIER1Q8N108 512 aa17.15■□□□□ 0.34
CENPU-202ENST00000502461 DCBLD2Q96PD2 775 aa17.08■□□□□ 0.32
CENPU-202ENST00000502461 PHF12Q96QT6 1004 aa17.07■□□□□ 0.32
CENPU-202ENST00000502461 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
CENPU-202ENST00000502461 POTEIP0CG38 1075 aa17.02■□□□□ 0.32
CENPU-202ENST00000502461 GALR2O43603 387 aaPredicted RBP17.01■□□□□ 0.31
CENPU-202ENST00000502461 TSPYL2Q9H2G4 693 aaPredicted RBP17.01■□□□□ 0.31
CENPU-202ENST00000502461 LHX8Q68G74 356 aa16.93■□□□□ 0.3
CENPU-202ENST00000502461 ZBTB47Q9UFB7 747 aaPredicted RBP16.86■□□□□ 0.29
CENPU-202ENST00000502461 RASEFQ8IZ41 740 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms