RNA–Protein interactions for RNA: ENST00000502356.3

CTTNBP2NL-203, Transcript of CTTNBP2 N-terminal like, humanhuman

TSL 3

Gene CTTNBP2NL, Length 646 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2NL-203ENST00000502356 AEBP2Q6ZN18 517 aaPredicted RBP33.28■■■□□ 2.92
CTTNBP2NL-203ENST00000502356 CHIC1Q5VXU3 224 aa32.78■■■□□ 2.84
CTTNBP2NL-203ENST00000502356 PHF23Q9BUL5 403 aaPredicted RBP28.83■■■□□ 2.21
CTTNBP2NL-203ENST00000502356 SENP3Q9H4L4 574 aaPredicted RBP28.26■■■□□ 2.11
CTTNBP2NL-203ENST00000502356 PLPPR3Q6T4P5 718 aa26.75■■□□□ 1.87
CTTNBP2NL-203ENST00000502356 FOXD1Q16676 465 aa26.17■■□□□ 1.78
CTTNBP2NL-203ENST00000502356 PPP6R1Q9UPN7 881 aa25.36■■□□□ 1.65
CTTNBP2NL-203ENST00000502356 ADRA2BP18089 450 aa25.35■■□□□ 1.65
CTTNBP2NL-203ENST00000502356 PIAS4Q8N2W9 510 aaPredicted RBP24.74■■□□□ 1.55
CTTNBP2NL-203ENST00000502356 MSH5O43196 834 aa24.08■■□□□ 1.45
CTTNBP2NL-203ENST00000502356 PPP4R3CPQ6ZMV5 832 aa23.58■■□□□ 1.37
CTTNBP2NL-203ENST00000502356 SCAF1Q9H7N4 1312 aaKnown RBP23.28■■□□□ 1.32
CTTNBP2NL-203ENST00000502356 KCNA4P22459 653 aa23.27■■□□□ 1.32
CTTNBP2NL-203ENST00000502356 NCBP3Q53F19 620 aaKnown RBP23.07■■□□□ 1.28
CTTNBP2NL-203ENST00000502356 MAPK8IP2Q13387 824 aaPredicted RBP22.93■■□□□ 1.26
CTTNBP2NL-203ENST00000502356 CNKSR2Q8WXI2 1034 aa22.89■■□□□ 1.25
CTTNBP2NL-203ENST00000502356 NPM3O75607 178 aaKnown RBP22.67■■□□□ 1.22
CTTNBP2NL-203ENST00000502356 DMRT2Q9Y5R5 561 aa22.58■■□□□ 1.21
CTTNBP2NL-203ENST00000502356 RNF216Q9NWF9 866 aaPredicted RBP22.38■■□□□ 1.17
CTTNBP2NL-203ENST00000502356 HOXD11P31277 338 aaPredicted RBP22.23■■□□□ 1.15
CTTNBP2NL-203ENST00000502356 SLC4A1APQ9BWU0 796 aaKnown RBP22.22■■□□□ 1.15
CTTNBP2NL-203ENST00000502356 DNAJC5BQ9UF47 199 aa22.03■■□□□ 1.12
CTTNBP2NL-203ENST00000502356 EHMT2Q96KQ7 1210 aa21.81■■□□□ 1.08
CTTNBP2NL-203ENST00000502356 DCAF8L1A6NGE4 600 aa21.59■■□□□ 1.05
CTTNBP2NL-203ENST00000502356 CSRNP3Q8WYN3 585 aa21.5■■□□□ 1.03
CTTNBP2NL-203ENST00000502356 POTEDQ86YR6 584 aa21.48■■□□□ 1.03
CTTNBP2NL-203ENST00000502356 ZBTB22O15209 634 aa21.38■■□□□ 1.01
CTTNBP2NL-203ENST00000502356 FOXD4L1Q9NU39 408 aa21.37■■□□□ 1.01
CTTNBP2NL-203ENST00000502356 SLC4A2P04920 1241 aa21.35■■□□□ 1.01
CTTNBP2NL-203ENST00000502356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.17■□□□□ 0.98
CTTNBP2NL-203ENST00000502356 MYCNP04198 464 aaPredicted RBP20.97■□□□□ 0.95
CTTNBP2NL-203ENST00000502356 U3KPZ7 1027 aaPredicted RBP20.83■□□□□ 0.93
CTTNBP2NL-203ENST00000502356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.72■□□□□ 0.91
CTTNBP2NL-203ENST00000502356 HNRNPUL2Q1KMD3 747 aaKnown RBP20.72■□□□□ 0.91
CTTNBP2NL-203ENST00000502356 ATXN8OSP0DMR3 200 aa20.64■□□□□ 0.89
CTTNBP2NL-203ENST00000502356 SAMD1Q6SPF0 538 aaPredicted RBP20.63■□□□□ 0.89
CTTNBP2NL-203ENST00000502356 RNF39Q9H2S5 420 aa20.63■□□□□ 0.89
CTTNBP2NL-203ENST00000502356 APLP2Q06481 763 aa20.45■□□□□ 0.86
CTTNBP2NL-203ENST00000502356 C1QBPQ07021 282 aaKnown RBP20.43■□□□□ 0.86
CTTNBP2NL-203ENST00000502356 ATF5Q9Y2D1 282 aaPredicted RBP20.35■□□□□ 0.85
CTTNBP2NL-203ENST00000502356 SPINK5Q9NQ38 1064 aaPredicted RBP20.17■□□□□ 0.82
CTTNBP2NL-203ENST00000502356 CAPN15O75808 1086 aa20.11■□□□□ 0.81
CTTNBP2NL-203ENST00000502356 ZNF219Q9P2Y4 722 aaPredicted RBP20.09■□□□□ 0.81
CTTNBP2NL-203ENST00000502356 TRHP20396 242 aaPredicted RBP20.06■□□□□ 0.8
CTTNBP2NL-203ENST00000502356 CACNB1Q02641 598 aaPredicted RBP19.94■□□□□ 0.78
CTTNBP2NL-203ENST00000502356 POLA2Q14181 598 aa19.81■□□□□ 0.76
CTTNBP2NL-203ENST00000502356 ABCB7O75027 752 aa19.72■□□□□ 0.75
CTTNBP2NL-203ENST00000502356 DSG3P32926 999 aa19.72■□□□□ 0.75
CTTNBP2NL-203ENST00000502356 FBLN2P98095 1184 aa19.54■□□□□ 0.72
CTTNBP2NL-203ENST00000502356 ZBTB12Q9Y330 459 aaPredicted RBP19.52■□□□□ 0.72
CTTNBP2NL-203ENST00000502356 MKRN4PQ13434 485 aaPredicted RBP19.48■□□□□ 0.71
CTTNBP2NL-203ENST00000502356 FKBP8Q14318 412 aa19.41■□□□□ 0.7
CTTNBP2NL-203ENST00000502356 SPDYE4A6NLX3 237 aa19.19■□□□□ 0.66
CTTNBP2NL-203ENST00000502356 OSCARQ8IYS5 282 aa19.08■□□□□ 0.64
CTTNBP2NL-203ENST00000502356 SPDYE2BA6NHP3 402 aa19.01■□□□□ 0.63
CTTNBP2NL-203ENST00000502356 SPDYE6P0CI01 402 aa19.01■□□□□ 0.63
CTTNBP2NL-203ENST00000502356 SPDYE2Q495Y8 402 aa19.01■□□□□ 0.63
CTTNBP2NL-203ENST00000502356 ZNF692Q9BU19 519 aaPredicted RBP18.97■□□□□ 0.63
CTTNBP2NL-203ENST00000502356 PROM2Q8N271 834 aa18.9■□□□□ 0.62
CTTNBP2NL-203ENST00000502356 SSUH2Q9Y2M2 353 aa18.85■□□□□ 0.61
CTTNBP2NL-203ENST00000502356 RBM42Q9BTD8 480 aaKnown RBP18.81■□□□□ 0.6
CTTNBP2NL-203ENST00000502356 FBXO3Q9UK99 471 aa18.72■□□□□ 0.59
CTTNBP2NL-203ENST00000502356 PABPN1Q86U42 306 aaKnown RBP eCLIP18.7■□□□□ 0.58
CTTNBP2NL-203ENST00000502356 AKT1S1Q96B36 256 aa18.63■□□□□ 0.57
CTTNBP2NL-203ENST00000502356 STAG3Q9UJ98 1225 aa18.5■□□□□ 0.55
CTTNBP2NL-203ENST00000502356 REM2Q8IYK8 340 aaPredicted RBP18.42■□□□□ 0.54
CTTNBP2NL-203ENST00000502356 VASPP50552 380 aaPredicted RBP18.4■□□□□ 0.54
CTTNBP2NL-203ENST00000502356 SPDYE1Q8NFV5 336 aaPredicted RBP18.39■□□□□ 0.53
CTTNBP2NL-203ENST00000502356 CLEC11AQ9Y240 323 aa18.28■□□□□ 0.52
CTTNBP2NL-203ENST00000502356 MIER1Q8N108 512 aa18.2■□□□□ 0.5
CTTNBP2NL-203ENST00000502356 PITPNM1O00562 1244 aa18.19■□□□□ 0.5
CTTNBP2NL-203ENST00000502356 PLCD3Q8N3E9 789 aa18.19■□□□□ 0.5
CTTNBP2NL-203ENST00000502356 PRR29P0C7W0 189 aa18.18■□□□□ 0.5
CTTNBP2NL-203ENST00000502356 IFNLR1Q8IU57 520 aaPredicted RBP18.18■□□□□ 0.5
CTTNBP2NL-203ENST00000502356 AMER1Q5JTC6 1135 aaPredicted RBP18.13■□□□□ 0.49
CTTNBP2NL-203ENST00000502356 PLEKHG5O94827 1062 aa18.11■□□□□ 0.49
CTTNBP2NL-203ENST00000502356 KLHL34Q8N239 644 aa18.06■□□□□ 0.48
CTTNBP2NL-203ENST00000502356 RTN4Q9NQC3 1192 aaKnown RBP18.03■□□□□ 0.48
CTTNBP2NL-203ENST00000502356 ZBTB47Q9UFB7 747 aaPredicted RBP18■□□□□ 0.47
CTTNBP2NL-203ENST00000502356 CREBZFQ9NS37 354 aa17.96■□□□□ 0.47
CTTNBP2NL-203ENST00000502356 SPOCK2Q92563 424 aa17.94■□□□□ 0.46
CTTNBP2NL-203ENST00000502356 CHRDL2Q6WN34 429 aa17.91■□□□□ 0.46
CTTNBP2NL-203ENST00000502356 FXR2P51116 673 aaKnown RBP eCLIP17.83■□□□□ 0.44
CTTNBP2NL-203ENST00000502356 MNX1P50219 401 aaPredicted RBP17.8■□□□□ 0.44
CTTNBP2NL-203ENST00000502356 CHADLQ6NUI6 762 aa17.78■□□□□ 0.44
CTTNBP2NL-203ENST00000502356 PRKAR2AP13861 404 aaKnown RBP17.76■□□□□ 0.43
CTTNBP2NL-203ENST00000502356 NPM1P06748 294 aaKnown RBP eCLIP17.72■□□□□ 0.43
CTTNBP2NL-203ENST00000502356 PIP4P2Q8N4L2 257 aa17.72■□□□□ 0.43
CTTNBP2NL-203ENST00000502356 NUBP1P53384 320 aa17.68■□□□□ 0.42
CTTNBP2NL-203ENST00000502356 FARP1Q9Y4F1 1045 aaPredicted RBP17.67■□□□□ 0.42
CTTNBP2NL-203ENST00000502356 PKD2Q13563 968 aa17.64■□□□□ 0.41
CTTNBP2NL-203ENST00000502356 CIZ1Q9ULV3 898 aaPredicted RBP17.61■□□□□ 0.41
CTTNBP2NL-203ENST00000502356 GSE1Q14687 1217 aa17.59■□□□□ 0.41
CTTNBP2NL-203ENST00000502356 DCAF8Q5TAQ9 597 aa17.56■□□□□ 0.4
CTTNBP2NL-203ENST00000502356 FAM212AQ96EL1 285 aa17.55■□□□□ 0.4
CTTNBP2NL-203ENST00000502356 RASEFQ8IZ41 740 aa17.53■□□□□ 0.4
CTTNBP2NL-203ENST00000502356 ECM2O94769 699 aaPredicted RBP17.51■□□□□ 0.39
CTTNBP2NL-203ENST00000502356 TRIM41Q8WV44 630 aa17.48■□□□□ 0.39
CTTNBP2NL-203ENST00000502356 TSPYL2Q9H2G4 693 aaPredicted RBP17.39■□□□□ 0.37
CTTNBP2NL-203ENST00000502356 PAK3O75914 559 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms