RNA–Protein interactions for RNA: ENST00000499392.1

LRAT-202, Transcript of lecithin retinol acyltransferase, humanhuman

TSL 1 (best)

Gene LRAT, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-202ENST00000499392 AEBP2Q6ZN18 517 aaPredicted RBP21.66■■□□□ 1.06
LRAT-202ENST00000499392 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
LRAT-202ENST00000499392 PHF23Q9BUL5 403 aaPredicted RBP18.64■□□□□ 0.57
LRAT-202ENST00000499392 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
LRAT-202ENST00000499392 PLPPR3Q6T4P5 718 aa17.13■□□□□ 0.33
LRAT-202ENST00000499392 FOXD1Q16676 465 aa17.04■□□□□ 0.32
LRAT-202ENST00000499392 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
LRAT-202ENST00000499392 ADRA2BP18089 450 aa16.37■□□□□ 0.21
LRAT-202ENST00000499392 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
LRAT-202ENST00000499392 MSH5O43196 834 aa15.77■□□□□ 0.12
LRAT-202ENST00000499392 POTEDQ86YR6 584 aa15.18■□□□□ 0.02
LRAT-202ENST00000499392 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
LRAT-202ENST00000499392 SCAF1Q9H7N4 1312 aaKnown RBP14.93□□□□□ -0.02
LRAT-202ENST00000499392 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
LRAT-202ENST00000499392 KCNA4P22459 653 aa14.79□□□□□ -0.04
LRAT-202ENST00000499392 NCBP3Q53F19 620 aaKnown RBP14.68□□□□□ -0.06
LRAT-202ENST00000499392 CNKSR2Q8WXI2 1034 aa14.68□□□□□ -0.06
LRAT-202ENST00000499392 DMRT2Q9Y5R5 561 aa14.66□□□□□ -0.06
LRAT-202ENST00000499392 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.09
LRAT-202ENST00000499392 RNF216Q9NWF9 866 aaPredicted RBP14.41□□□□□ -0.1
LRAT-202ENST00000499392 HOXD11P31277 338 aaPredicted RBP14.38□□□□□ -0.11
LRAT-202ENST00000499392 DNAJC5BQ9UF47 199 aa14.2□□□□□ -0.14
LRAT-202ENST00000499392 SLC4A1APQ9BWU0 796 aaKnown RBP14.04□□□□□ -0.16
LRAT-202ENST00000499392 DCAF8L1A6NGE4 600 aa13.89□□□□□ -0.19
LRAT-202ENST00000499392 SLC4A2P04920 1241 aa13.75□□□□□ -0.21
LRAT-202ENST00000499392 ZBTB22O15209 634 aa13.65□□□□□ -0.22
LRAT-202ENST00000499392 EHMT2Q96KQ7 1210 aa13.62□□□□□ -0.23
LRAT-202ENST00000499392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.61□□□□□ -0.23
LRAT-202ENST00000499392 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
LRAT-202ENST00000499392 CSRNP3Q8WYN3 585 aa13.56□□□□□ -0.24
LRAT-202ENST00000499392 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
LRAT-202ENST00000499392 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.25
LRAT-202ENST00000499392 CACNB1Q02641 598 aaPredicted RBP13.44□□□□□ -0.26
LRAT-202ENST00000499392 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
LRAT-202ENST00000499392 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
LRAT-202ENST00000499392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.23□□□□□ -0.29
LRAT-202ENST00000499392 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
LRAT-202ENST00000499392 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
LRAT-202ENST00000499392 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
LRAT-202ENST00000499392 APLP2Q06481 763 aa13.07□□□□□ -0.32
LRAT-202ENST00000499392 SPINK5Q9NQ38 1064 aaPredicted RBP13.07□□□□□ -0.32
LRAT-202ENST00000499392 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
LRAT-202ENST00000499392 CAPN15O75808 1086 aa12.95□□□□□ -0.34
LRAT-202ENST00000499392 ZNF219Q9P2Y4 722 aaPredicted RBP12.91□□□□□ -0.34
LRAT-202ENST00000499392 TRHP20396 242 aaPredicted RBP12.89□□□□□ -0.35
LRAT-202ENST00000499392 DSG3P32926 999 aa12.81□□□□□ -0.36
LRAT-202ENST00000499392 POLA2Q14181 598 aa12.73□□□□□ -0.37
LRAT-202ENST00000499392 ABCB7O75027 752 aa12.72□□□□□ -0.37
LRAT-202ENST00000499392 MKRN4PQ13434 485 aaPredicted RBP12.52□□□□□ -0.41
LRAT-202ENST00000499392 ZBTB12Q9Y330 459 aaPredicted RBP12.5□□□□□ -0.41
LRAT-202ENST00000499392 FBLN2P98095 1184 aa12.43□□□□□ -0.42
LRAT-202ENST00000499392 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
LRAT-202ENST00000499392 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
LRAT-202ENST00000499392 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
LRAT-202ENST00000499392 SPDYE2Q495Y8 402 aa12.19□□□□□ -0.46
LRAT-202ENST00000499392 SPDYE4A6NLX3 237 aa12.18□□□□□ -0.46
LRAT-202ENST00000499392 FKBP8Q14318 412 aa12.18□□□□□ -0.46
LRAT-202ENST00000499392 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
LRAT-202ENST00000499392 SSUH2Q9Y2M2 353 aa12.13□□□□□ -0.47
LRAT-202ENST00000499392 ZNF692Q9BU19 519 aaPredicted RBP12.11□□□□□ -0.47
LRAT-202ENST00000499392 PROM2Q8N271 834 aa12.08□□□□□ -0.48
LRAT-202ENST00000499392 AKT1S1Q96B36 256 aa12.03□□□□□ -0.48
LRAT-202ENST00000499392 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
LRAT-202ENST00000499392 POTEHQ6S545 545 aa11.93□□□□□ -0.5
LRAT-202ENST00000499392 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
LRAT-202ENST00000499392 SPDYE1Q8NFV5 336 aaPredicted RBP11.8□□□□□ -0.52
LRAT-202ENST00000499392 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
LRAT-202ENST00000499392 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
LRAT-202ENST00000499392 FBXO3Q9UK99 471 aa11.75□□□□□ -0.53
LRAT-202ENST00000499392 CHRDL2Q6WN34 429 aa11.73□□□□□ -0.53
LRAT-202ENST00000499392 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
LRAT-202ENST00000499392 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
LRAT-202ENST00000499392 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
LRAT-202ENST00000499392 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
LRAT-202ENST00000499392 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
LRAT-202ENST00000499392 PIP4P2Q8N4L2 257 aa11.54□□□□□ -0.56
LRAT-202ENST00000499392 MIER1Q8N108 512 aa11.52□□□□□ -0.57
LRAT-202ENST00000499392 IFNLR1Q8IU57 520 aaPredicted RBP11.49□□□□□ -0.57
LRAT-202ENST00000499392 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
LRAT-202ENST00000499392 MNX1P50219 401 aaPredicted RBP11.47□□□□□ -0.57
LRAT-202ENST00000499392 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.57
LRAT-202ENST00000499392 CHADLQ6NUI6 762 aa11.46□□□□□ -0.57
LRAT-202ENST00000499392 PLEKHG5O94827 1062 aa11.4□□□□□ -0.58
LRAT-202ENST00000499392 FARP1Q9Y4F1 1045 aaPredicted RBP11.39□□□□□ -0.59
LRAT-202ENST00000499392 ZBTB47Q9UFB7 747 aaPredicted RBP11.37□□□□□ -0.59
LRAT-202ENST00000499392 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
LRAT-202ENST00000499392 NUBP1P53384 320 aa11.3□□□□□ -0.6
LRAT-202ENST00000499392 SPOCK2Q92563 424 aa11.3□□□□□ -0.6
LRAT-202ENST00000499392 NPM1P06748 294 aaKnown RBP eCLIP11.29□□□□□ -0.6
LRAT-202ENST00000499392 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
LRAT-202ENST00000499392 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
LRAT-202ENST00000499392 HAX1O00165 279 aa11.22□□□□□ -0.61
LRAT-202ENST00000499392 C19orf67A6NJJ6 358 aa11.19□□□□□ -0.62
LRAT-202ENST00000499392 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
LRAT-202ENST00000499392 AMER1Q5JTC6 1135 aaPredicted RBP11.13□□□□□ -0.63
LRAT-202ENST00000499392 FAM212AQ96EL1 285 aa11.13□□□□□ -0.63
LRAT-202ENST00000499392 RTN4Q9NQC3 1192 aaKnown RBP11.13□□□□□ -0.63
LRAT-202ENST00000499392 PKD2Q13563 968 aa11.12□□□□□ -0.63
LRAT-202ENST00000499392 GSE1Q14687 1217 aa11.11□□□□□ -0.63
LRAT-202ENST00000499392 EVX2Q03828 476 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms