RNA–Protein interactions for RNA: ENST00000498703.1

PTEN-205, Transcript of phosphatase and tensin homolog, humanhuman

TSL 2

Gene PTEN, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-205ENST00000498703 AEBP2Q6ZN18 517 aaPredicted RBP30.25■■■□□ 2.43
PTEN-205ENST00000498703 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
PTEN-205ENST00000498703 SENP3Q9H4L4 574 aaPredicted RBP25.86■■□□□ 1.73
PTEN-205ENST00000498703 PHF23Q9BUL5 403 aaPredicted RBP25.51■■□□□ 1.67
PTEN-205ENST00000498703 FOXD1Q16676 465 aa24.06■■□□□ 1.44
PTEN-205ENST00000498703 PLPPR3Q6T4P5 718 aa23.09■■□□□ 1.29
PTEN-205ENST00000498703 PIAS4Q8N2W9 510 aaPredicted RBP22.57■■□□□ 1.2
PTEN-205ENST00000498703 MSH5O43196 834 aa22.54■■□□□ 1.2
PTEN-205ENST00000498703 PPP6R1Q9UPN7 881 aa22.5■■□□□ 1.19
PTEN-205ENST00000498703 ADRA2BP18089 450 aa22.49■■□□□ 1.19
PTEN-205ENST00000498703 POTEDQ86YR6 584 aa21.88■■□□□ 1.09
PTEN-205ENST00000498703 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
PTEN-205ENST00000498703 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
PTEN-205ENST00000498703 DMRT2Q9Y5R5 561 aa20.49■□□□□ 0.87
PTEN-205ENST00000498703 PPP4R3CPQ6ZMV5 832 aa20.23■□□□□ 0.83
PTEN-205ENST00000498703 CNKSR2Q8WXI2 1034 aa19.84■□□□□ 0.77
PTEN-205ENST00000498703 DCAF8L1A6NGE4 600 aa19.78■□□□□ 0.76
PTEN-205ENST00000498703 HOXD11P31277 338 aaPredicted RBP19.73■□□□□ 0.75
PTEN-205ENST00000498703 RNF216Q9NWF9 866 aaPredicted RBP19.63■□□□□ 0.73
PTEN-205ENST00000498703 NCBP3Q53F19 620 aaKnown RBP19.5■□□□□ 0.71
PTEN-205ENST00000498703 CACNB1Q02641 598 aaPredicted RBP19.35■□□□□ 0.69
PTEN-205ENST00000498703 RNF39Q9H2S5 420 aa19.19■□□□□ 0.66
PTEN-205ENST00000498703 NPM3O75607 178 aaKnown RBP19.18■□□□□ 0.66
PTEN-205ENST00000498703 DNAJC5BQ9UF47 199 aa19■□□□□ 0.63
PTEN-205ENST00000498703 C1QBPQ07021 282 aaKnown RBP18.94■□□□□ 0.62
PTEN-205ENST00000498703 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.9■□□□□ 0.62
PTEN-205ENST00000498703 KCNA4P22459 653 aa18.87■□□□□ 0.61
PTEN-205ENST00000498703 U3KPZ7 1027 aaPredicted RBP18.46■□□□□ 0.55
PTEN-205ENST00000498703 SLC4A2P04920 1241 aa18.27■□□□□ 0.52
PTEN-205ENST00000498703 CAPN15O75808 1086 aa18.21■□□□□ 0.51
PTEN-205ENST00000498703 SPINK5Q9NQ38 1064 aaPredicted RBP18.18■□□□□ 0.5
PTEN-205ENST00000498703 APLP2Q06481 763 aa18.02■□□□□ 0.48
PTEN-205ENST00000498703 DSG3P32926 999 aa18.01■□□□□ 0.47
PTEN-205ENST00000498703 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
PTEN-205ENST00000498703 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
PTEN-205ENST00000498703 TRHP20396 242 aaPredicted RBP17.94■□□□□ 0.46
PTEN-205ENST00000498703 SAMD1Q6SPF0 538 aaPredicted RBP17.88■□□□□ 0.45
PTEN-205ENST00000498703 ZNF219Q9P2Y4 722 aaPredicted RBP17.88■□□□□ 0.45
PTEN-205ENST00000498703 SLC4A1APQ9BWU0 796 aaKnown RBP17.86■□□□□ 0.45
PTEN-205ENST00000498703 ABCB7O75027 752 aa17.79■□□□□ 0.44
PTEN-205ENST00000498703 MYCNP04198 464 aaPredicted RBP17.77■□□□□ 0.44
PTEN-205ENST00000498703 FOXD4L1Q9NU39 408 aa17.62■□□□□ 0.41
PTEN-205ENST00000498703 POLA2Q14181 598 aa17.41■□□□□ 0.38
PTEN-205ENST00000498703 ZBTB22O15209 634 aa17.31■□□□□ 0.36
PTEN-205ENST00000498703 ATF5Q9Y2D1 282 aaPredicted RBP17.31■□□□□ 0.36
PTEN-205ENST00000498703 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
PTEN-205ENST00000498703 POTEHQ6S545 545 aa17.18■□□□□ 0.34
PTEN-205ENST00000498703 ZBTB12Q9Y330 459 aaPredicted RBP17.09■□□□□ 0.33
PTEN-205ENST00000498703 ATXN8OSP0DMR3 200 aa17.02■□□□□ 0.32
PTEN-205ENST00000498703 OSCARQ8IYS5 282 aa16.89■□□□□ 0.29
PTEN-205ENST00000498703 AKT1S1Q96B36 256 aa16.82■□□□□ 0.28
PTEN-205ENST00000498703 CHRDL2Q6WN34 429 aa16.81■□□□□ 0.28
PTEN-205ENST00000498703 FBLN2P98095 1184 aa16.72■□□□□ 0.27
PTEN-205ENST00000498703 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
PTEN-205ENST00000498703 CSRNP3Q8WYN3 585 aa16.57■□□□□ 0.24
PTEN-205ENST00000498703 SPDYE2BA6NHP3 402 aa16.54■□□□□ 0.24
PTEN-205ENST00000498703 SPDYE6P0CI01 402 aa16.54■□□□□ 0.24
PTEN-205ENST00000498703 SPDYE2Q495Y8 402 aa16.54■□□□□ 0.24
PTEN-205ENST00000498703 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
PTEN-205ENST00000498703 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
PTEN-205ENST00000498703 PITPNM1O00562 1244 aa16.49■□□□□ 0.23
PTEN-205ENST00000498703 PIP4P2Q8N4L2 257 aa16.41■□□□□ 0.22
PTEN-205ENST00000498703 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
PTEN-205ENST00000498703 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.2
PTEN-205ENST00000498703 CLEC11AQ9Y240 323 aa16.29■□□□□ 0.2
PTEN-205ENST00000498703 SSUH2Q9Y2M2 353 aa16.29■□□□□ 0.2
PTEN-205ENST00000498703 SPDYE1Q8NFV5 336 aaPredicted RBP16.26■□□□□ 0.19
PTEN-205ENST00000498703 HAX1O00165 279 aa16.16■□□□□ 0.18
PTEN-205ENST00000498703 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
PTEN-205ENST00000498703 SP7Q8TDD2 431 aaPredicted RBP16.14■□□□□ 0.17
PTEN-205ENST00000498703 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
PTEN-205ENST00000498703 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
PTEN-205ENST00000498703 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
PTEN-205ENST00000498703 EVX2Q03828 476 aa15.86■□□□□ 0.13
PTEN-205ENST00000498703 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
PTEN-205ENST00000498703 C19orf67A6NJJ6 358 aa15.78■□□□□ 0.12
PTEN-205ENST00000498703 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
PTEN-205ENST00000498703 FARP1Q9Y4F1 1045 aaPredicted RBP15.67■□□□□ 0.1
PTEN-205ENST00000498703 CD44P16070 742 aaKnown RBP15.6■□□□□ 0.09
PTEN-205ENST00000498703 GABBR2O75899 941 aa15.55■□□□□ 0.08
PTEN-205ENST00000498703 CREBZFQ9NS37 354 aa15.54■□□□□ 0.08
PTEN-205ENST00000498703 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
PTEN-205ENST00000498703 PROM2Q8N271 834 aa15.34■□□□□ 0.05
PTEN-205ENST00000498703 PAK3O75914 559 aaPredicted RBP15.33■□□□□ 0.04
PTEN-205ENST00000498703 NPM1P06748 294 aaKnown RBP eCLIP15.33■□□□□ 0.04
PTEN-205ENST00000498703 CLCN6P51797 869 aa15.31■□□□□ 0.04
PTEN-205ENST00000498703 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
PTEN-205ENST00000498703 MNX1P50219 401 aaPredicted RBP15.23■□□□□ 0.03
PTEN-205ENST00000498703 DCBLD2Q96PD2 775 aa15.22■□□□□ 0.03
PTEN-205ENST00000498703 POTEIP0CG38 1075 aa15.18■□□□□ 0.02
PTEN-205ENST00000498703 PHF12Q96QT6 1004 aa15.16■□□□□ 0.02
PTEN-205ENST00000498703 PLEKHG5O94827 1062 aa15.15■□□□□ 0.02
PTEN-205ENST00000498703 GALR2O43603 387 aaPredicted RBP15.14■□□□□ 0.01
PTEN-205ENST00000498703 LHX8Q68G74 356 aa15.14■□□□□ 0.01
PTEN-205ENST00000498703 FKBP8Q14318 412 aa15.12■□□□□ 0.01
PTEN-205ENST00000498703 MIER1Q8N108 512 aa15.11■□□□□ 0.01
PTEN-205ENST00000498703 TSPYL2Q9H2G4 693 aaPredicted RBP15.07■□□□□ 0
PTEN-205ENST00000498703 PLCD3Q8N3E9 789 aa15.03■□□□□ -0
PTEN-205ENST00000498703 MS4A3Q96HJ5 214 aa14.96□□□□□ -0.01
PTEN-205ENST00000498703 CCDC61Q9Y6R9 512 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms