RNA–Protein interactions for RNA: ENST00000498690.1

LPGAT1-204, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

TSL 5

Gene LPGAT1, Length 300 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-204ENST00000498690 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
LPGAT1-204ENST00000498690 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
LPGAT1-204ENST00000498690 PHF23Q9BUL5 403 aaPredicted RBP21.26■□□□□ 0.99
LPGAT1-204ENST00000498690 SENP3Q9H4L4 574 aaPredicted RBP20.34■□□□□ 0.85
LPGAT1-204ENST00000498690 PLPPR3Q6T4P5 718 aa19.82■□□□□ 0.76
LPGAT1-204ENST00000498690 FOXD1Q16676 465 aa18.83■□□□□ 0.6
LPGAT1-204ENST00000498690 ADRA2BP18089 450 aa18.62■□□□□ 0.57
LPGAT1-204ENST00000498690 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
LPGAT1-204ENST00000498690 POTEDQ86YR6 584 aa18.37■□□□□ 0.53
LPGAT1-204ENST00000498690 PIAS4Q8N2W9 510 aaPredicted RBP17.9■□□□□ 0.46
LPGAT1-204ENST00000498690 KCNA4P22459 653 aa17.81■□□□□ 0.44
LPGAT1-204ENST00000498690 PPP4R3CPQ6ZMV5 832 aa17.56■□□□□ 0.4
LPGAT1-204ENST00000498690 MSH5O43196 834 aa17.33■□□□□ 0.36
LPGAT1-204ENST00000498690 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
LPGAT1-204ENST00000498690 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
LPGAT1-204ENST00000498690 SLC4A1APQ9BWU0 796 aaKnown RBP17.07■□□□□ 0.32
LPGAT1-204ENST00000498690 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
LPGAT1-204ENST00000498690 NPM3O75607 178 aaKnown RBP17.01■□□□□ 0.31
LPGAT1-204ENST00000498690 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
LPGAT1-204ENST00000498690 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
LPGAT1-204ENST00000498690 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
LPGAT1-204ENST00000498690 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
LPGAT1-204ENST00000498690 ZBTB22O15209 634 aa16.38■□□□□ 0.21
LPGAT1-204ENST00000498690 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
LPGAT1-204ENST00000498690 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
LPGAT1-204ENST00000498690 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
LPGAT1-204ENST00000498690 FOXD4L1Q9NU39 408 aa16.21■□□□□ 0.19
LPGAT1-204ENST00000498690 SLC4A2P04920 1241 aa15.92■□□□□ 0.14
LPGAT1-204ENST00000498690 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
LPGAT1-204ENST00000498690 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
LPGAT1-204ENST00000498690 ATXN8OSP0DMR3 200 aa15.58■□□□□ 0.08
LPGAT1-204ENST00000498690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.07
LPGAT1-204ENST00000498690 CACNB1Q02641 598 aaPredicted RBP15.36■□□□□ 0.05
LPGAT1-204ENST00000498690 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
LPGAT1-204ENST00000498690 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
LPGAT1-204ENST00000498690 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
LPGAT1-204ENST00000498690 SAMD1Q6SPF0 538 aaPredicted RBP15.26■□□□□ 0.03
LPGAT1-204ENST00000498690 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
LPGAT1-204ENST00000498690 FKBP8Q14318 412 aa15.15■□□□□ 0.02
LPGAT1-204ENST00000498690 APLP2Q06481 763 aa14.98□□□□□ -0.01
LPGAT1-204ENST00000498690 ZNF219Q9P2Y4 722 aaPredicted RBP14.94□□□□□ -0.02
LPGAT1-204ENST00000498690 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
LPGAT1-204ENST00000498690 RTN4Q9NQC3 1192 aaKnown RBP14.79□□□□□ -0.04
LPGAT1-204ENST00000498690 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
LPGAT1-204ENST00000498690 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
LPGAT1-204ENST00000498690 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.05
LPGAT1-204ENST00000498690 CAPN15O75808 1086 aa14.64□□□□□ -0.07
LPGAT1-204ENST00000498690 MKRN4PQ13434 485 aaPredicted RBP14.61□□□□□ -0.07
LPGAT1-204ENST00000498690 POLA2Q14181 598 aa14.6□□□□□ -0.07
LPGAT1-204ENST00000498690 SPDYE4A6NLX3 237 aa14.58□□□□□ -0.08
LPGAT1-204ENST00000498690 C1QBPQ07021 282 aaKnown RBP14.58□□□□□ -0.08
LPGAT1-204ENST00000498690 FBLN2P98095 1184 aa14.57□□□□□ -0.08
LPGAT1-204ENST00000498690 FBXO3Q9UK99 471 aa14.44□□□□□ -0.1
LPGAT1-204ENST00000498690 ABCB7O75027 752 aa14.41□□□□□ -0.1
LPGAT1-204ENST00000498690 PROM2Q8N271 834 aa14.36□□□□□ -0.11
LPGAT1-204ENST00000498690 ZBTB12Q9Y330 459 aaPredicted RBP14.35□□□□□ -0.11
LPGAT1-204ENST00000498690 SLC24A1O60721 1099 aa14.3□□□□□ -0.12
LPGAT1-204ENST00000498690 DSG3P32926 999 aa14.22□□□□□ -0.13
LPGAT1-204ENST00000498690 POTEHQ6S545 545 aa14.22□□□□□ -0.13
LPGAT1-204ENST00000498690 VASPP50552 380 aaPredicted RBP14.21□□□□□ -0.13
LPGAT1-204ENST00000498690 ZNF692Q9BU19 519 aaPredicted RBP14.1□□□□□ -0.15
LPGAT1-204ENST00000498690 IFNLR1Q8IU57 520 aaPredicted RBP14.08□□□□□ -0.16
LPGAT1-204ENST00000498690 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
LPGAT1-204ENST00000498690 SPDYE2BA6NHP3 402 aa14.02□□□□□ -0.17
LPGAT1-204ENST00000498690 SPDYE6P0CI01 402 aa14.02□□□□□ -0.17
LPGAT1-204ENST00000498690 SPDYE2Q495Y8 402 aa14.02□□□□□ -0.17
LPGAT1-204ENST00000498690 SSUH2Q9Y2M2 353 aa13.96□□□□□ -0.17
LPGAT1-204ENST00000498690 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
LPGAT1-204ENST00000498690 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
LPGAT1-204ENST00000498690 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
LPGAT1-204ENST00000498690 PKD2Q13563 968 aa13.82□□□□□ -0.2
LPGAT1-204ENST00000498690 PLCD3Q8N3E9 789 aa13.82□□□□□ -0.2
LPGAT1-204ENST00000498690 SPOCK2Q92563 424 aa13.82□□□□□ -0.2
LPGAT1-204ENST00000498690 DCAF8L2P0C7V8 631 aa13.8□□□□□ -0.2
LPGAT1-204ENST00000498690 MIER1Q8N108 512 aa13.79□□□□□ -0.2
LPGAT1-204ENST00000498690 PLCB2Q00722 1185 aa13.68□□□□□ -0.22
LPGAT1-204ENST00000498690 ECM2O94769 699 aaPredicted RBP13.66□□□□□ -0.22
LPGAT1-204ENST00000498690 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
LPGAT1-204ENST00000498690 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
LPGAT1-204ENST00000498690 CIZ1Q9ULV3 898 aaPredicted RBP13.54□□□□□ -0.24
LPGAT1-204ENST00000498690 HAP1P54257 671 aaPredicted RBP13.52□□□□□ -0.25
LPGAT1-204ENST00000498690 RBM42Q9BTD8 480 aaKnown RBP13.52□□□□□ -0.25
LPGAT1-204ENST00000498690 RGL2O15211 777 aa13.5□□□□□ -0.25
LPGAT1-204ENST00000498690 AKT1S1Q96B36 256 aa13.5□□□□□ -0.25
LPGAT1-204ENST00000498690 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
LPGAT1-204ENST00000498690 NPM1P06748 294 aaKnown RBP eCLIP13.45□□□□□ -0.26
LPGAT1-204ENST00000498690 BBXQ8WY36 941 aaPredicted RBP13.45□□□□□ -0.26
LPGAT1-204ENST00000498690 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
LPGAT1-204ENST00000498690 CLEC11AQ9Y240 323 aa13.44□□□□□ -0.26
LPGAT1-204ENST00000498690 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
LPGAT1-204ENST00000498690 REM2Q8IYK8 340 aaPredicted RBP13.38□□□□□ -0.27
LPGAT1-204ENST00000498690 TRIM41Q8WV44 630 aa13.37□□□□□ -0.27
LPGAT1-204ENST00000498690 GSE1Q14687 1217 aa13.35□□□□□ -0.27
LPGAT1-204ENST00000498690 PAXIP1Q6ZW49 1069 aaPredicted RBP13.35□□□□□ -0.27
LPGAT1-204ENST00000498690 NUBP1P53384 320 aa13.34□□□□□ -0.27
LPGAT1-204ENST00000498690 CFAP44Q96MT7 982 aa13.34□□□□□ -0.27
LPGAT1-204ENST00000498690 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
LPGAT1-204ENST00000498690 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
LPGAT1-204ENST00000498690 DCAF8Q5TAQ9 597 aa13.31□□□□□ -0.28
LPGAT1-204ENST00000498690 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms