RNA–Protein interactions for RNA: ENST00000498570.1

NIFK-207, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 2

Gene NIFK, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-207ENST00000498570 AEBP2Q6ZN18 517 aaPredicted RBP20.48■□□□□ 0.87
NIFK-207ENST00000498570 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
NIFK-207ENST00000498570 SENP3Q9H4L4 574 aaPredicted RBP17.59■□□□□ 0.41
NIFK-207ENST00000498570 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
NIFK-207ENST00000498570 FOXD1Q16676 465 aa16.42■□□□□ 0.22
NIFK-207ENST00000498570 POTEDQ86YR6 584 aa15.94■□□□□ 0.14
NIFK-207ENST00000498570 MSH5O43196 834 aa15.59■□□□□ 0.09
NIFK-207ENST00000498570 PIAS4Q8N2W9 510 aaPredicted RBP15.22■□□□□ 0.03
NIFK-207ENST00000498570 PLPPR3Q6T4P5 718 aa15.02■□□□□ -0
NIFK-207ENST00000498570 PPP6R1Q9UPN7 881 aa14.97□□□□□ -0.01
NIFK-207ENST00000498570 ADRA2BP18089 450 aa14.88□□□□□ -0.03
NIFK-207ENST00000498570 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
NIFK-207ENST00000498570 MAPK8IP2Q13387 824 aaPredicted RBP13.79□□□□□ -0.2
NIFK-207ENST00000498570 SCAF1Q9H7N4 1312 aaKnown RBP13.68□□□□□ -0.22
NIFK-207ENST00000498570 CACNB1Q02641 598 aaPredicted RBP13.59□□□□□ -0.23
NIFK-207ENST00000498570 DCAF8L1A6NGE4 600 aa13.24□□□□□ -0.29
NIFK-207ENST00000498570 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
NIFK-207ENST00000498570 HOXD11P31277 338 aaPredicted RBP13.2□□□□□ -0.3
NIFK-207ENST00000498570 PPP4R3CPQ6ZMV5 832 aa13.07□□□□□ -0.32
NIFK-207ENST00000498570 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
NIFK-207ENST00000498570 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
NIFK-207ENST00000498570 CNKSR2Q8WXI2 1034 aa12.96□□□□□ -0.33
NIFK-207ENST00000498570 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
NIFK-207ENST00000498570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.51□□□□□ -0.419e-8■□□□□ 10.2
NIFK-207ENST00000498570 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
NIFK-207ENST00000498570 POTEHQ6S545 545 aa12.4□□□□□ -0.42
NIFK-207ENST00000498570 NPM3O75607 178 aaKnown RBP12.26□□□□□ -0.45
NIFK-207ENST00000498570 DSG3P32926 999 aa12.23□□□□□ -0.45
NIFK-207ENST00000498570 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
NIFK-207ENST00000498570 CAPN15O75808 1086 aa12.16□□□□□ -0.46
NIFK-207ENST00000498570 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
NIFK-207ENST00000498570 APLP2Q06481 763 aa11.89□□□□□ -0.51
NIFK-207ENST00000498570 ZNF219Q9P2Y4 722 aaPredicted RBP11.87□□□□□ -0.51
NIFK-207ENST00000498570 TRHP20396 242 aaPredicted RBP11.84□□□□□ -0.51
NIFK-207ENST00000498570 SLC4A2P04920 1241 aa11.83□□□□□ -0.52
NIFK-207ENST00000498570 ABCB7O75027 752 aa11.81□□□□□ -0.52
NIFK-207ENST00000498570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
NIFK-207ENST00000498570 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
NIFK-207ENST00000498570 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
NIFK-207ENST00000498570 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
NIFK-207ENST00000498570 KCNA4P22459 653 aa11.6□□□□□ -0.55
NIFK-207ENST00000498570 CHRDL2Q6WN34 429 aa11.6□□□□□ -0.55
NIFK-207ENST00000498570 POLA2Q14181 598 aa11.44□□□□□ -0.58
NIFK-207ENST00000498570 SP7Q8TDD2 431 aaPredicted RBP11.42□□□□□ -0.58
NIFK-207ENST00000498570 MYCNP04198 464 aaPredicted RBP11.38□□□□□ -0.59
NIFK-207ENST00000498570 AKT1S1Q96B36 256 aa11.34□□□□□ -0.59
NIFK-207ENST00000498570 ZBTB12Q9Y330 459 aaPredicted RBP11.24□□□□□ -0.61
NIFK-207ENST00000498570 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
NIFK-207ENST00000498570 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
NIFK-207ENST00000498570 HAX1O00165 279 aa11.11□□□□□ -0.63
NIFK-207ENST00000498570 FXR2P51116 673 aaKnown RBP eCLIP11.11□□□□□ -0.63
NIFK-207ENST00000498570 PITPNM1O00562 1244 aa11.09□□□□□ -0.63
NIFK-207ENST00000498570 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
NIFK-207ENST00000498570 ATF5Q9Y2D1 282 aaPredicted RBP11.09□□□□□ -0.63
NIFK-207ENST00000498570 FOXD4L1Q9NU39 408 aa11□□□□□ -0.65
NIFK-207ENST00000498570 EVX2Q03828 476 aa10.94□□□□□ -0.66
NIFK-207ENST00000498570 SLC4A1APQ9BWU0 796 aaKnown RBP10.86□□□□□ -0.67
NIFK-207ENST00000498570 SPDYE2BA6NHP3 402 aa10.84□□□□□ -0.67
NIFK-207ENST00000498570 SPDYE6P0CI01 402 aa10.84□□□□□ -0.67
NIFK-207ENST00000498570 SPDYE2Q495Y8 402 aa10.84□□□□□ -0.67
NIFK-207ENST00000498570 PRKAR2AP13861 404 aaKnown RBP10.78□□□□□ -0.68
NIFK-207ENST00000498570 C19orf67A6NJJ6 358 aa10.77□□□□□ -0.69
NIFK-207ENST00000498570 SPDYE1Q8NFV5 336 aaPredicted RBP10.75□□□□□ -0.69
NIFK-207ENST00000498570 ATXN8OSP0DMR3 200 aa10.74□□□□□ -0.69
NIFK-207ENST00000498570 FBLN2P98095 1184 aa10.73□□□□□ -0.69
NIFK-207ENST00000498570 GABBR2O75899 941 aa10.69□□□□□ -0.7
NIFK-207ENST00000498570 LHX8Q68G74 356 aa10.69□□□□□ -0.7
NIFK-207ENST00000498570 CLEC11AQ9Y240 323 aa10.69□□□□□ -0.7
NIFK-207ENST00000498570 ZBTB22O15209 634 aa10.65□□□□□ -0.7
NIFK-207ENST00000498570 SSUH2Q9Y2M2 353 aa10.64□□□□□ -0.71
NIFK-207ENST00000498570 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
NIFK-207ENST00000498570 MKRN4PQ13434 485 aaPredicted RBP10.58□□□□□ -0.72
NIFK-207ENST00000498570 CHADLQ6NUI6 762 aa10.53□□□□□ -0.72
NIFK-207ENST00000498570 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
NIFK-207ENST00000498570 POTEIP0CG38 1075 aa10.46□□□□□ -0.73
NIFK-207ENST00000498570 CLCN6P51797 869 aa10.46□□□□□ -0.73
NIFK-207ENST00000498570 CD44P16070 742 aaKnown RBP10.43□□□□□ -0.74
NIFK-207ENST00000498570 PABPN1Q86U42 306 aaKnown RBP eCLIP10.42□□□□□ -0.74
NIFK-207ENST00000498570 FARP1Q9Y4F1 1045 aaPredicted RBP10.38□□□□□ -0.75
NIFK-207ENST00000498570 PLSCR2Q9NRY7 297 aa10.33□□□□□ -0.76
NIFK-207ENST00000498570 DCBLD2Q96PD2 775 aa10.3□□□□□ -0.76
NIFK-207ENST00000498570 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
NIFK-207ENST00000498570 ZRANB1Q9UGI0 708 aa10.19□□□□□ -0.78
NIFK-207ENST00000498570 OTUD5Q96G74 571 aa10.16□□□□□ -0.78
NIFK-207ENST00000498570 GALR2O43603 387 aaPredicted RBP10.14□□□□□ -0.79
NIFK-207ENST00000498570 CREBZFQ9NS37 354 aa10.12□□□□□ -0.79
NIFK-207ENST00000498570 POTEB2H3BUK9 544 aa10.1□□□□□ -0.79
NIFK-207ENST00000498570 POTEMA6NI47 508 aa10.09□□□□□ -0.79
NIFK-207ENST00000498570 STAG3Q9UJ98 1225 aa10.08□□□□□ -0.8
NIFK-207ENST00000498570 PAK3O75914 559 aaPredicted RBP10.04□□□□□ -0.8
NIFK-207ENST00000498570 POTEGQ6S5H5 508 aa10.03□□□□□ -0.8
NIFK-207ENST00000498570 PCDH10Q9P2E7 1040 aa10.01□□□□□ -0.81
NIFK-207ENST00000498570 PHF12Q96QT6 1004 aa10□□□□□ -0.81
NIFK-207ENST00000498570 PELP1Q8IZL8 1130 aaKnown RBP9.98□□□□□ -0.81
NIFK-207ENST00000498570 NPM1P06748 294 aaKnown RBP eCLIP9.94□□□□□ -0.82
NIFK-207ENST00000498570 ASTLQ6HA08 431 aaPredicted RBP9.94□□□□□ -0.82
NIFK-207ENST00000498570 SLC39A7Q92504 469 aa9.92□□□□□ -0.82
NIFK-207ENST00000498570 METRNQ9UJH8 293 aa9.92□□□□□ -0.82
NIFK-207ENST00000498570 C7P10643 843 aa9.91□□□□□ -0.82
NIFK-207ENST00000498570 MNX1P50219 401 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms