RNA–Protein interactions for RNA: ENST00000498478.1

ITGB6-210, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 705 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-210ENST00000498478 AEBP2Q6ZN18 517 aaPredicted RBP27.84■■■□□ 2.05
ITGB6-210ENST00000498478 CHIC1Q5VXU3 224 aa26.27■■□□□ 1.8
ITGB6-210ENST00000498478 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
ITGB6-210ENST00000498478 PHF23Q9BUL5 403 aaPredicted RBP23.35■■□□□ 1.33
ITGB6-210ENST00000498478 FOXD1Q16676 465 aa22.16■■□□□ 1.14
ITGB6-210ENST00000498478 PLPPR3Q6T4P5 718 aa21.61■■□□□ 1.05
ITGB6-210ENST00000498478 POTEDQ86YR6 584 aa20.76■□□□□ 0.91
ITGB6-210ENST00000498478 MSH5O43196 834 aa20.72■□□□□ 0.91
ITGB6-210ENST00000498478 PIAS4Q8N2W9 510 aaPredicted RBP20.61■□□□□ 0.89
ITGB6-210ENST00000498478 PPP6R1Q9UPN7 881 aa20.57■□□□□ 0.88
ITGB6-210ENST00000498478 ADRA2BP18089 450 aa20.46■□□□□ 0.87
ITGB6-210ENST00000498478 KCNA4P22459 653 aa19.52■□□□□ 0.72
ITGB6-210ENST00000498478 PPP4R3CPQ6ZMV5 832 aa19.17■□□□□ 0.66
ITGB6-210ENST00000498478 EHMT2Q96KQ7 1210 aa18.97■□□□□ 0.63
ITGB6-210ENST00000498478 MAPK8IP2Q13387 824 aaPredicted RBP18.89■□□□□ 0.61
ITGB6-210ENST00000498478 NCBP3Q53F19 620 aaKnown RBP18.82■□□□□ 0.6
ITGB6-210ENST00000498478 DMRT2Q9Y5R5 561 aa18.75■□□□□ 0.59
ITGB6-210ENST00000498478 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
ITGB6-210ENST00000498478 NPM3O75607 178 aaKnown RBP18.58■□□□□ 0.56
ITGB6-210ENST00000498478 SCAF1Q9H7N4 1312 aaKnown RBP18.54■□□□□ 0.56
ITGB6-210ENST00000498478 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
ITGB6-210ENST00000498478 CSRNP3Q8WYN3 585 aa18.42■□□□□ 0.54
ITGB6-210ENST00000498478 ZBTB22O15209 634 aa17.98■□□□□ 0.47
ITGB6-210ENST00000498478 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
ITGB6-210ENST00000498478 CACNB1Q02641 598 aaPredicted RBP17.96■□□□□ 0.47
ITGB6-210ENST00000498478 HOXD11P31277 338 aaPredicted RBP17.95■□□□□ 0.46
ITGB6-210ENST00000498478 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
ITGB6-210ENST00000498478 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
ITGB6-210ENST00000498478 RNF39Q9H2S5 420 aa17.73■□□□□ 0.43
ITGB6-210ENST00000498478 FOXD4L1Q9NU39 408 aa17.72■□□□□ 0.43
ITGB6-210ENST00000498478 SLC4A2P04920 1241 aa17.4■□□□□ 0.38
ITGB6-210ENST00000498478 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
ITGB6-210ENST00000498478 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
ITGB6-210ENST00000498478 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.32
ITGB6-210ENST00000498478 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
ITGB6-210ENST00000498478 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
ITGB6-210ENST00000498478 ATF5Q9Y2D1 282 aaPredicted RBP16.69■□□□□ 0.26
ITGB6-210ENST00000498478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.63■□□□□ 0.25
ITGB6-210ENST00000498478 HNRNPUL2Q1KMD3 747 aaKnown RBP16.63■□□□□ 0.25
ITGB6-210ENST00000498478 SAMD1Q6SPF0 538 aaPredicted RBP16.62■□□□□ 0.25
ITGB6-210ENST00000498478 SPINK5Q9NQ38 1064 aaPredicted RBP16.62■□□□□ 0.25
ITGB6-210ENST00000498478 FKBP8Q14318 412 aa16.61■□□□□ 0.25
ITGB6-210ENST00000498478 DSG3P32926 999 aa16.53■□□□□ 0.24
ITGB6-210ENST00000498478 CAPN15O75808 1086 aa16.52■□□□□ 0.24
ITGB6-210ENST00000498478 RTN4Q9NQC3 1192 aaKnown RBP16.32■□□□□ 0.2
ITGB6-210ENST00000498478 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
ITGB6-210ENST00000498478 APLP2Q06481 763 aa16.28■□□□□ 0.2
ITGB6-210ENST00000498478 AMER1Q5JTC6 1135 aaPredicted RBP16.27■□□□□ 0.2
ITGB6-210ENST00000498478 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
ITGB6-210ENST00000498478 POTEHQ6S545 545 aa16.19■□□□□ 0.18
ITGB6-210ENST00000498478 ABCB7O75027 752 aa16.18■□□□□ 0.18
ITGB6-210ENST00000498478 MKRN4PQ13434 485 aaPredicted RBP15.98■□□□□ 0.15
ITGB6-210ENST00000498478 SPDYE4A6NLX3 237 aa15.93■□□□□ 0.14
ITGB6-210ENST00000498478 POLA2Q14181 598 aa15.91■□□□□ 0.14
ITGB6-210ENST00000498478 FBLN2P98095 1184 aa15.88■□□□□ 0.13
ITGB6-210ENST00000498478 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
ITGB6-210ENST00000498478 FBXO3Q9UK99 471 aa15.78■□□□□ 0.12
ITGB6-210ENST00000498478 PROM2Q8N271 834 aa15.72■□□□□ 0.11
ITGB6-210ENST00000498478 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
ITGB6-210ENST00000498478 ZBTB12Q9Y330 459 aaPredicted RBP15.62■□□□□ 0.09
ITGB6-210ENST00000498478 VASPP50552 380 aaPredicted RBP15.58■□□□□ 0.08
ITGB6-210ENST00000498478 CHRDL2Q6WN34 429 aa15.5■□□□□ 0.07
ITGB6-210ENST00000498478 IFNLR1Q8IU57 520 aaPredicted RBP15.44■□□□□ 0.06
ITGB6-210ENST00000498478 ZNF692Q9BU19 519 aaPredicted RBP15.36■□□□□ 0.05
ITGB6-210ENST00000498478 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
ITGB6-210ENST00000498478 AKT1S1Q96B36 256 aa15.29■□□□□ 0.04
ITGB6-210ENST00000498478 SPDYE2BA6NHP3 402 aa15.28■□□□□ 0.04
ITGB6-210ENST00000498478 SPDYE6P0CI01 402 aa15.28■□□□□ 0.04
ITGB6-210ENST00000498478 SPDYE2Q495Y8 402 aa15.28■□□□□ 0.04
ITGB6-210ENST00000498478 SSUH2Q9Y2M2 353 aa15.24■□□□□ 0.03
ITGB6-210ENST00000498478 PABPN1Q86U42 306 aaKnown RBP eCLIP15.2■□□□□ 0.02
ITGB6-210ENST00000498478 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
ITGB6-210ENST00000498478 KLHL34Q8N239 644 aa15.19■□□□□ 0.02
ITGB6-210ENST00000498478 PKD2Q13563 968 aa15.18■□□□□ 0.02
ITGB6-210ENST00000498478 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
ITGB6-210ENST00000498478 DCAF8L2P0C7V8 631 aa15.15■□□□□ 0.02
ITGB6-210ENST00000498478 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
ITGB6-210ENST00000498478 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
ITGB6-210ENST00000498478 PLCD3Q8N3E9 789 aa15.1■□□□□ 0.01
ITGB6-210ENST00000498478 PITPNM1O00562 1244 aa15.07■□□□□ 0
ITGB6-210ENST00000498478 PLCB2Q00722 1185 aa15.05■□□□□ -0
ITGB6-210ENST00000498478 MIER1Q8N108 512 aa15.05■□□□□ -0
ITGB6-210ENST00000498478 SP7Q8TDD2 431 aaPredicted RBP15.05■□□□□ -0
ITGB6-210ENST00000498478 ECM2O94769 699 aaPredicted RBP14.96□□□□□ -0.01
ITGB6-210ENST00000498478 FXR2P51116 673 aaKnown RBP eCLIP14.96□□□□□ -0.01
ITGB6-210ENST00000498478 HAP1P54257 671 aaPredicted RBP14.87□□□□□ -0.03
ITGB6-210ENST00000498478 PLEKHG5O94827 1062 aa14.86□□□□□ -0.03
ITGB6-210ENST00000498478 HAX1O00165 279 aa14.85□□□□□ -0.03
ITGB6-210ENST00000498478 RGL2O15211 777 aa14.81□□□□□ -0.04
ITGB6-210ENST00000498478 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
ITGB6-210ENST00000498478 CIZ1Q9ULV3 898 aaPredicted RBP14.81□□□□□ -0.04
ITGB6-210ENST00000498478 NPM1P06748 294 aaKnown RBP eCLIP14.79□□□□□ -0.04
ITGB6-210ENST00000498478 EVX2Q03828 476 aa14.77□□□□□ -0.05
ITGB6-210ENST00000498478 BBXQ8WY36 941 aaPredicted RBP14.76□□□□□ -0.05
ITGB6-210ENST00000498478 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.73□□□□□ -0.05
ITGB6-210ENST00000498478 SPDYE1Q8NFV5 336 aaPredicted RBP14.68□□□□□ -0.06
ITGB6-210ENST00000498478 PAXIP1Q6ZW49 1069 aaPredicted RBP14.66□□□□□ -0.06
ITGB6-210ENST00000498478 CLEC11AQ9Y240 323 aa14.65□□□□□ -0.06
ITGB6-210ENST00000498478 PRKAR2AP13861 404 aaKnown RBP14.64□□□□□ -0.07
ITGB6-210ENST00000498478 CFAP44Q96MT7 982 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms