RNA–Protein interactions for RNA: ENST00000498468.1

GBE1-206, Transcript of 1,4-alpha-glucan branching enzyme 1, humanhuman

TSL 3

Gene GBE1, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBE1-206ENST00000498468 AEBP2Q6ZN18 517 aaPredicted RBP29.16■■■□□ 2.26
GBE1-206ENST00000498468 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
GBE1-206ENST00000498468 SENP3Q9H4L4 574 aaPredicted RBP24.78■■□□□ 1.56
GBE1-206ENST00000498468 PHF23Q9BUL5 403 aaPredicted RBP24.63■■□□□ 1.53
GBE1-206ENST00000498468 FOXD1Q16676 465 aa23.07■■□□□ 1.28
GBE1-206ENST00000498468 PLPPR3Q6T4P5 718 aa22.54■■□□□ 1.2
GBE1-206ENST00000498468 PPP6R1Q9UPN7 881 aa21.87■■□□□ 1.09
GBE1-206ENST00000498468 ADRA2BP18089 450 aa21.8■■□□□ 1.08
GBE1-206ENST00000498468 PIAS4Q8N2W9 510 aaPredicted RBP21.61■■□□□ 1.05
GBE1-206ENST00000498468 MSH5O43196 834 aa21.42■■□□□ 1.02
GBE1-206ENST00000498468 POTEDQ86YR6 584 aa20.3■□□□□ 0.84
GBE1-206ENST00000498468 MAPK8IP2Q13387 824 aaPredicted RBP19.91■□□□□ 0.78
GBE1-206ENST00000498468 SCAF1Q9H7N4 1312 aaKnown RBP19.9■□□□□ 0.78
GBE1-206ENST00000498468 PPP4R3CPQ6ZMV5 832 aa19.8■□□□□ 0.76
GBE1-206ENST00000498468 DMRT2Q9Y5R5 561 aa19.73■□□□□ 0.75
GBE1-206ENST00000498468 CNKSR2Q8WXI2 1034 aa19.35■□□□□ 0.69
GBE1-206ENST00000498468 HOXD11P31277 338 aaPredicted RBP19.16■□□□□ 0.66
GBE1-206ENST00000498468 NCBP3Q53F19 620 aaKnown RBP19.12■□□□□ 0.65
GBE1-206ENST00000498468 RNF216Q9NWF9 866 aaPredicted RBP19.1■□□□□ 0.65
GBE1-206ENST00000498468 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
GBE1-206ENST00000498468 KCNA4P22459 653 aa18.86■□□□□ 0.61
GBE1-206ENST00000498468 DCAF8L1A6NGE4 600 aa18.8■□□□□ 0.6
GBE1-206ENST00000498468 DNAJC5BQ9UF47 199 aa18.49■□□□□ 0.55
GBE1-206ENST00000498468 RNF39Q9H2S5 420 aa18.35■□□□□ 0.53
GBE1-206ENST00000498468 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.18■□□□□ 0.58e-12■■■■□ 23.6
GBE1-206ENST00000498468 CACNB1Q02641 598 aaPredicted RBP18.12■□□□□ 0.49
GBE1-206ENST00000498468 C1QBPQ07021 282 aaKnown RBP18.08■□□□□ 0.48
GBE1-206ENST00000498468 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
GBE1-206ENST00000498468 U3KPZ7 1027 aaPredicted RBP17.9■□□□□ 0.46
GBE1-206ENST00000498468 SLC4A1APQ9BWU0 796 aaKnown RBP17.85■□□□□ 0.45
GBE1-206ENST00000498468 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
GBE1-206ENST00000498468 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
GBE1-206ENST00000498468 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
GBE1-206ENST00000498468 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
GBE1-206ENST00000498468 MYCNP04198 464 aaPredicted RBP17.45■□□□□ 0.38
GBE1-206ENST00000498468 CAPN15O75808 1086 aa17.42■□□□□ 0.38
GBE1-206ENST00000498468 SAMD1Q6SPF0 538 aaPredicted RBP17.4■□□□□ 0.38
GBE1-206ENST00000498468 ZBTB22O15209 634 aa17.38■□□□□ 0.37
GBE1-206ENST00000498468 APLP2Q06481 763 aa17.37■□□□□ 0.37
GBE1-206ENST00000498468 DSG3P32926 999 aa17.3■□□□□ 0.36
GBE1-206ENST00000498468 ZNF219Q9P2Y4 722 aaPredicted RBP17.24■□□□□ 0.35
GBE1-206ENST00000498468 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
GBE1-206ENST00000498468 ABCB7O75027 752 aa17.06■□□□□ 0.32
GBE1-206ENST00000498468 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
GBE1-206ENST00000498468 ATXN8OSP0DMR3 200 aa16.91■□□□□ 0.3
GBE1-206ENST00000498468 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
GBE1-206ENST00000498468 POLA2Q14181 598 aa16.88■□□□□ 0.29
GBE1-206ENST00000498468 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
GBE1-206ENST00000498468 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
GBE1-206ENST00000498468 RBM42Q9BTD8 480 aaKnown RBP16.45■□□□□ 0.22
GBE1-206ENST00000498468 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
GBE1-206ENST00000498468 MKRN4PQ13434 485 aaPredicted RBP16.3■□□□□ 0.2
GBE1-206ENST00000498468 FBLN2P98095 1184 aa16.29■□□□□ 0.2
GBE1-206ENST00000498468 AKT1S1Q96B36 256 aa16.18■□□□□ 0.18
GBE1-206ENST00000498468 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
GBE1-206ENST00000498468 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
GBE1-206ENST00000498468 SPDYE2Q495Y8 402 aa16.1■□□□□ 0.17
GBE1-206ENST00000498468 REM2Q8IYK8 340 aaPredicted RBP16.02■□□□□ 0.16
GBE1-206ENST00000498468 CHRDL2Q6WN34 429 aa15.97■□□□□ 0.15
GBE1-206ENST00000498468 POTEHQ6S545 545 aa15.96■□□□□ 0.15
GBE1-206ENST00000498468 SSUH2Q9Y2M2 353 aa15.96■□□□□ 0.15
GBE1-206ENST00000498468 ZNF692Q9BU19 519 aaPredicted RBP15.94■□□□□ 0.14
GBE1-206ENST00000498468 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
GBE1-206ENST00000498468 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
GBE1-206ENST00000498468 SPDYE1Q8NFV5 336 aaPredicted RBP15.71■□□□□ 0.11
GBE1-206ENST00000498468 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
GBE1-206ENST00000498468 SPDYE4A6NLX3 237 aa15.66■□□□□ 0.1
GBE1-206ENST00000498468 FXR2P51116 673 aaKnown RBP eCLIP15.66■□□□□ 0.1
GBE1-206ENST00000498468 CLEC11AQ9Y240 323 aa15.63■□□□□ 0.09
GBE1-206ENST00000498468 PRR29P0C7W0 189 aa15.45■□□□□ 0.06
GBE1-206ENST00000498468 PRKAR2AP13861 404 aaKnown RBP15.42■□□□□ 0.06
GBE1-206ENST00000498468 PROM2Q8N271 834 aa15.42■□□□□ 0.06
GBE1-206ENST00000498468 STAG3Q9UJ98 1225 aa15.37■□□□□ 0.05
GBE1-206ENST00000498468 CHADLQ6NUI6 762 aa15.33■□□□□ 0.04
GBE1-206ENST00000498468 FKBP8Q14318 412 aa15.25■□□□□ 0.03
GBE1-206ENST00000498468 HAX1O00165 279 aa15.24■□□□□ 0.03
GBE1-206ENST00000498468 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
GBE1-206ENST00000498468 FARP1Q9Y4F1 1045 aaPredicted RBP15.16■□□□□ 0.02
GBE1-206ENST00000498468 EVX2Q03828 476 aa15.15■□□□□ 0.02
GBE1-206ENST00000498468 C19orf67A6NJJ6 358 aa15.14■□□□□ 0.01
GBE1-206ENST00000498468 SP7Q8TDD2 431 aaPredicted RBP15.14■□□□□ 0.01
GBE1-206ENST00000498468 MNX1P50219 401 aaPredicted RBP15.01□□□□□ -0.01
GBE1-206ENST00000498468 CD44P16070 742 aaKnown RBP14.95□□□□□ -0.02
GBE1-206ENST00000498468 NPM1P06748 294 aaKnown RBP eCLIP14.88□□□□□ -0.03
GBE1-206ENST00000498468 MIER1Q8N108 512 aa14.87□□□□□ -0.03
GBE1-206ENST00000498468 FBXO3Q9UK99 471 aa14.82□□□□□ -0.04
GBE1-206ENST00000498468 GABBR2O75899 941 aa14.8□□□□□ -0.04
GBE1-206ENST00000498468 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
GBE1-206ENST00000498468 PLCD3Q8N3E9 789 aa14.79□□□□□ -0.04
GBE1-206ENST00000498468 ZRANB1Q9UGI0 708 aa14.79□□□□□ -0.04
GBE1-206ENST00000498468 ZNF579Q8NAF0 562 aaKnown RBP14.78□□□□□ -0.04
GBE1-206ENST00000498468 PAK3O75914 559 aaPredicted RBP14.72□□□□□ -0.05
GBE1-206ENST00000498468 CLCN6P51797 869 aa14.7□□□□□ -0.06
GBE1-206ENST00000498468 ZBTB47Q9UFB7 747 aaPredicted RBP14.67□□□□□ -0.06
GBE1-206ENST00000498468 VASPP50552 380 aaPredicted RBP14.66□□□□□ -0.06
GBE1-206ENST00000498468 RASEFQ8IZ41 740 aa14.63□□□□□ -0.07
GBE1-206ENST00000498468 PHF12Q96QT6 1004 aa14.63□□□□□ -0.07
GBE1-206ENST00000498468 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
GBE1-206ENST00000498468 NUBP1P53384 320 aa14.61□□□□□ -0.07
GBE1-206ENST00000498468 CCDC61Q9Y6R9 512 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms