RNA–Protein interactions for RNA: ENST00000497870.1

PLS3-208, Transcript of plastin 3, humanhuman

TSL 4

Gene PLS3, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLS3-208ENST00000497870 AEBP2Q6ZN18 517 aaPredicted RBP22.07■■□□□ 1.12
PLS3-208ENST00000497870 CHIC1Q5VXU3 224 aa21.32■■□□□ 1
PLS3-208ENST00000497870 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
PLS3-208ENST00000497870 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
PLS3-208ENST00000497870 FOXD1Q16676 465 aa17.41■□□□□ 0.38
PLS3-208ENST00000497870 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
PLS3-208ENST00000497870 PPP6R1Q9UPN7 881 aa16.61■□□□□ 0.25
PLS3-208ENST00000497870 ADRA2BP18089 450 aa16.53■□□□□ 0.24
PLS3-208ENST00000497870 PIAS4Q8N2W9 510 aaPredicted RBP16.29■□□□□ 0.2
PLS3-208ENST00000497870 MSH5O43196 834 aa16.07■□□□□ 0.16
PLS3-208ENST00000497870 PPP4R3CPQ6ZMV5 832 aa15.11■□□□□ 0.01
PLS3-208ENST00000497870 MAPK8IP2Q13387 824 aaPredicted RBP15.06■□□□□ 0
PLS3-208ENST00000497870 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
PLS3-208ENST00000497870 POTEDQ86YR6 584 aa15.03■□□□□ -0
PLS3-208ENST00000497870 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
PLS3-208ENST00000497870 CNKSR2Q8WXI2 1034 aa14.73□□□□□ -0.05
PLS3-208ENST00000497870 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
PLS3-208ENST00000497870 KCNA4P22459 653 aa14.55□□□□□ -0.08
PLS3-208ENST00000497870 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
PLS3-208ENST00000497870 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.09
PLS3-208ENST00000497870 NPM3O75607 178 aaKnown RBP14.47□□□□□ -0.09
PLS3-208ENST00000497870 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
PLS3-208ENST00000497870 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
PLS3-208ENST00000497870 RNF39Q9H2S5 420 aa13.81□□□□□ -0.2
PLS3-208ENST00000497870 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.21
PLS3-208ENST00000497870 SLC4A2P04920 1241 aa13.75□□□□□ -0.21
PLS3-208ENST00000497870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.21
PLS3-208ENST00000497870 U3KPZ7 1027 aaPredicted RBP13.6□□□□□ -0.23
PLS3-208ENST00000497870 C1QBPQ07021 282 aaKnown RBP13.59□□□□□ -0.23
PLS3-208ENST00000497870 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
PLS3-208ENST00000497870 ZBTB22O15209 634 aa13.45□□□□□ -0.26
PLS3-208ENST00000497870 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
PLS3-208ENST00000497870 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
PLS3-208ENST00000497870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
PLS3-208ENST00000497870 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
PLS3-208ENST00000497870 SPINK5Q9NQ38 1064 aaPredicted RBP13.25□□□□□ -0.29
PLS3-208ENST00000497870 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
PLS3-208ENST00000497870 CSRNP3Q8WYN3 585 aa13.16□□□□□ -0.3
PLS3-208ENST00000497870 APLP2Q06481 763 aa13.14□□□□□ -0.31
PLS3-208ENST00000497870 CAPN15O75808 1086 aa13.12□□□□□ -0.31
PLS3-208ENST00000497870 EHMT2Q96KQ7 1210 aa13.1□□□□□ -0.31
PLS3-208ENST00000497870 DSG3P32926 999 aa13.06□□□□□ -0.32
PLS3-208ENST00000497870 ATF5Q9Y2D1 282 aaPredicted RBP13.06□□□□□ -0.32
PLS3-208ENST00000497870 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
PLS3-208ENST00000497870 ATXN8OSP0DMR3 200 aa13.01□□□□□ -0.33
PLS3-208ENST00000497870 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
PLS3-208ENST00000497870 ABCB7O75027 752 aa12.88□□□□□ -0.35
PLS3-208ENST00000497870 POLA2Q14181 598 aa12.8□□□□□ -0.36
PLS3-208ENST00000497870 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
PLS3-208ENST00000497870 MKRN4PQ13434 485 aaPredicted RBP12.5□□□□□ -0.41
PLS3-208ENST00000497870 FBLN2P98095 1184 aa12.4□□□□□ -0.42
PLS3-208ENST00000497870 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
PLS3-208ENST00000497870 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
PLS3-208ENST00000497870 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
PLS3-208ENST00000497870 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
PLS3-208ENST00000497870 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
PLS3-208ENST00000497870 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
PLS3-208ENST00000497870 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
PLS3-208ENST00000497870 REM2Q8IYK8 340 aaPredicted RBP12.11□□□□□ -0.47
PLS3-208ENST00000497870 ZNF692Q9BU19 519 aaPredicted RBP12.1□□□□□ -0.47
PLS3-208ENST00000497870 SPDYE4A6NLX3 237 aa12.02□□□□□ -0.49
PLS3-208ENST00000497870 PITPNM1O00562 1244 aa11.99□□□□□ -0.49
PLS3-208ENST00000497870 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
PLS3-208ENST00000497870 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
PLS3-208ENST00000497870 PROM2Q8N271 834 aa11.94□□□□□ -0.5
PLS3-208ENST00000497870 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
PLS3-208ENST00000497870 FXR2P51116 673 aaKnown RBP eCLIP11.83□□□□□ -0.52
PLS3-208ENST00000497870 POTEHQ6S545 545 aa11.83□□□□□ -0.52
PLS3-208ENST00000497870 FKBP8Q14318 412 aa11.82□□□□□ -0.52
PLS3-208ENST00000497870 PIP4P2Q8N4L2 257 aa11.8□□□□□ -0.52
PLS3-208ENST00000497870 CLEC11AQ9Y240 323 aa11.78□□□□□ -0.52
PLS3-208ENST00000497870 STAG3Q9UJ98 1225 aa11.7□□□□□ -0.54
PLS3-208ENST00000497870 PRR29P0C7W0 189 aa11.68□□□□□ -0.54
PLS3-208ENST00000497870 PRKAR2AP13861 404 aaKnown RBP11.63□□□□□ -0.55
PLS3-208ENST00000497870 CREBZFQ9NS37 354 aa11.59□□□□□ -0.55
PLS3-208ENST00000497870 CHADLQ6NUI6 762 aa11.58□□□□□ -0.56
PLS3-208ENST00000497870 MNX1P50219 401 aaPredicted RBP11.5□□□□□ -0.57
PLS3-208ENST00000497870 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
PLS3-208ENST00000497870 FBXO3Q9UK99 471 aa11.44□□□□□ -0.58
PLS3-208ENST00000497870 C19orf67A6NJJ6 358 aa11.43□□□□□ -0.58
PLS3-208ENST00000497870 EVX2Q03828 476 aa11.4□□□□□ -0.58
PLS3-208ENST00000497870 HAX1O00165 279 aa11.38□□□□□ -0.59
PLS3-208ENST00000497870 MIER1Q8N108 512 aa11.36□□□□□ -0.59
PLS3-208ENST00000497870 VASPP50552 380 aaPredicted RBP11.35□□□□□ -0.59
PLS3-208ENST00000497870 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
PLS3-208ENST00000497870 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
PLS3-208ENST00000497870 CD44P16070 742 aaKnown RBP11.28□□□□□ -0.6
PLS3-208ENST00000497870 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
PLS3-208ENST00000497870 PLEKHG5O94827 1062 aa11.26□□□□□ -0.61
PLS3-208ENST00000497870 NUBP1P53384 320 aa11.22□□□□□ -0.61
PLS3-208ENST00000497870 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
PLS3-208ENST00000497870 IFNLR1Q8IU57 520 aaPredicted RBP11.21□□□□□ -0.61
PLS3-208ENST00000497870 RASEFQ8IZ41 740 aa11.19□□□□□ -0.62
PLS3-208ENST00000497870 ZNF579Q8NAF0 562 aaKnown RBP11.19□□□□□ -0.62
PLS3-208ENST00000497870 ZRANB1Q9UGI0 708 aa11.17□□□□□ -0.62
PLS3-208ENST00000497870 CCDC61Q9Y6R9 512 aa11.13□□□□□ -0.63
PLS3-208ENST00000497870 GABBR2O75899 941 aa11.11□□□□□ -0.63
PLS3-208ENST00000497870 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
PLS3-208ENST00000497870 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
PLS3-208ENST00000497870 TSPYL2Q9H2G4 693 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms