RNA–Protein interactions for RNA: ENST00000497616.1

CUL4B-207, Transcript of cullin 4B, humanhuman

TSL 2

Gene CUL4B, Length 1,011 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4B-207ENST00000497616 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
CUL4B-207ENST00000497616 CHIC1Q5VXU3 224 aa26.9■■□□□ 1.9
CUL4B-207ENST00000497616 PHF23Q9BUL5 403 aaPredicted RBP23.69■■□□□ 1.38
CUL4B-207ENST00000497616 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.29
CUL4B-207ENST00000497616 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
CUL4B-207ENST00000497616 FOXD1Q16676 465 aa21.45■■□□□ 1.02
CUL4B-207ENST00000497616 PPP6R1Q9UPN7 881 aa20.81■□□□□ 0.92
CUL4B-207ENST00000497616 ADRA2BP18089 450 aa20.78■□□□□ 0.92
CUL4B-207ENST00000497616 PIAS4Q8N2W9 510 aaPredicted RBP20.26■□□□□ 0.83
CUL4B-207ENST00000497616 MSH5O43196 834 aa19.7■□□□□ 0.74
CUL4B-207ENST00000497616 POTEDQ86YR6 584 aa19.42■□□□□ 0.7
CUL4B-207ENST00000497616 PPP4R3CPQ6ZMV5 832 aa19.34■□□□□ 0.69
CUL4B-207ENST00000497616 KCNA4P22459 653 aa19.14■□□□□ 0.65
CUL4B-207ENST00000497616 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
CUL4B-207ENST00000497616 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
CUL4B-207ENST00000497616 MAPK8IP2Q13387 824 aaPredicted RBP18.79■□□□□ 0.6
CUL4B-207ENST00000497616 CNKSR2Q8WXI2 1034 aa18.76■□□□□ 0.59
CUL4B-207ENST00000497616 NPM3O75607 178 aaKnown RBP18.64■□□□□ 0.57
CUL4B-207ENST00000497616 DMRT2Q9Y5R5 561 aa18.52■□□□□ 0.56
CUL4B-207ENST00000497616 RNF216Q9NWF9 866 aaPredicted RBP18.36■□□□□ 0.53
CUL4B-207ENST00000497616 SLC4A1APQ9BWU0 796 aaKnown RBP18.25■□□□□ 0.51
CUL4B-207ENST00000497616 HOXD11P31277 338 aaPredicted RBP18.24■□□□□ 0.51
CUL4B-207ENST00000497616 DNAJC5BQ9UF47 199 aa18.14■□□□□ 0.49
CUL4B-207ENST00000497616 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
CUL4B-207ENST00000497616 CSRNP3Q8WYN3 585 aa17.71■□□□□ 0.43
CUL4B-207ENST00000497616 ZBTB22O15209 634 aa17.63■□□□□ 0.41
CUL4B-207ENST00000497616 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
CUL4B-207ENST00000497616 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
CUL4B-207ENST00000497616 SLC4A2P04920 1241 aa17.56■□□□□ 0.4
CUL4B-207ENST00000497616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.31■□□□□ 0.36
CUL4B-207ENST00000497616 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
CUL4B-207ENST00000497616 U3KPZ7 1027 aaPredicted RBP17.11■□□□□ 0.33
CUL4B-207ENST00000497616 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.95■□□□□ 0.3
CUL4B-207ENST00000497616 ATXN8OSP0DMR3 200 aa16.95■□□□□ 0.3
CUL4B-207ENST00000497616 HNRNPUL2Q1KMD3 747 aaKnown RBP16.95■□□□□ 0.3
CUL4B-207ENST00000497616 RNF39Q9H2S5 420 aa16.91■□□□□ 0.3
CUL4B-207ENST00000497616 SAMD1Q6SPF0 538 aaPredicted RBP16.9■□□□□ 0.3
CUL4B-207ENST00000497616 CACNB1Q02641 598 aaPredicted RBP16.78■□□□□ 0.28
CUL4B-207ENST00000497616 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
CUL4B-207ENST00000497616 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
CUL4B-207ENST00000497616 APLP2Q06481 763 aa16.71■□□□□ 0.27
CUL4B-207ENST00000497616 SPINK5Q9NQ38 1064 aaPredicted RBP16.54■□□□□ 0.24
CUL4B-207ENST00000497616 ZNF219Q9P2Y4 722 aaPredicted RBP16.46■□□□□ 0.23
CUL4B-207ENST00000497616 CAPN15O75808 1086 aa16.44■□□□□ 0.22
CUL4B-207ENST00000497616 TRHP20396 242 aaPredicted RBP16.41■□□□□ 0.22
CUL4B-207ENST00000497616 POLA2Q14181 598 aa16.21■□□□□ 0.19
CUL4B-207ENST00000497616 DSG3P32926 999 aa16.17■□□□□ 0.18
CUL4B-207ENST00000497616 ABCB7O75027 752 aa16.14■□□□□ 0.17
CUL4B-207ENST00000497616 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
CUL4B-207ENST00000497616 FBLN2P98095 1184 aa15.98■□□□□ 0.15
CUL4B-207ENST00000497616 ZBTB12Q9Y330 459 aaPredicted RBP15.97■□□□□ 0.15
CUL4B-207ENST00000497616 FKBP8Q14318 412 aa15.96■□□□□ 0.15
CUL4B-207ENST00000497616 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
CUL4B-207ENST00000497616 OSCARQ8IYS5 282 aa15.66■□□□□ 0.1
CUL4B-207ENST00000497616 PROM2Q8N271 834 aa15.59■□□□□ 0.09
CUL4B-207ENST00000497616 SPDYE2BA6NHP3 402 aa15.58■□□□□ 0.08
CUL4B-207ENST00000497616 SPDYE6P0CI01 402 aa15.58■□□□□ 0.08
CUL4B-207ENST00000497616 SPDYE2Q495Y8 402 aa15.58■□□□□ 0.08
CUL4B-207ENST00000497616 ZNF692Q9BU19 519 aaPredicted RBP15.52■□□□□ 0.08
CUL4B-207ENST00000497616 SSUH2Q9Y2M2 353 aa15.5■□□□□ 0.07
CUL4B-207ENST00000497616 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
CUL4B-207ENST00000497616 FBXO3Q9UK99 471 aa15.34■□□□□ 0.05
CUL4B-207ENST00000497616 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
CUL4B-207ENST00000497616 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
CUL4B-207ENST00000497616 POTEHQ6S545 545 aa15.16■□□□□ 0.02
CUL4B-207ENST00000497616 VASPP50552 380 aaPredicted RBP15.13■□□□□ 0.01
CUL4B-207ENST00000497616 STAG3Q9UJ98 1225 aa15.13■□□□□ 0.01
CUL4B-207ENST00000497616 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
CUL4B-207ENST00000497616 SPDYE1Q8NFV5 336 aaPredicted RBP15.04■□□□□ -0
CUL4B-207ENST00000497616 IFNLR1Q8IU57 520 aaPredicted RBP14.96□□□□□ -0.01
CUL4B-207ENST00000497616 AMER1Q5JTC6 1135 aaPredicted RBP14.94□□□□□ -0.02
CUL4B-207ENST00000497616 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
CUL4B-207ENST00000497616 PITPNM1O00562 1244 aa14.91□□□□□ -0.02
CUL4B-207ENST00000497616 RTN4Q9NQC3 1192 aaKnown RBP14.89□□□□□ -0.03
CUL4B-207ENST00000497616 PLCD3Q8N3E9 789 aa14.88□□□□□ -0.03
CUL4B-207ENST00000497616 MIER1Q8N108 512 aa14.87□□□□□ -0.03
CUL4B-207ENST00000497616 PRR29P0C7W0 189 aa14.85□□□□□ -0.03
CUL4B-207ENST00000497616 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
CUL4B-207ENST00000497616 KLHL34Q8N239 644 aa14.77□□□□□ -0.05
CUL4B-207ENST00000497616 CREBZFQ9NS37 354 aa14.75□□□□□ -0.05
CUL4B-207ENST00000497616 ZBTB47Q9UFB7 747 aaPredicted RBP14.73□□□□□ -0.05
CUL4B-207ENST00000497616 SPOCK2Q92563 424 aa14.72□□□□□ -0.05
CUL4B-207ENST00000497616 MNX1P50219 401 aaPredicted RBP14.65□□□□□ -0.06
CUL4B-207ENST00000497616 CHRDL2Q6WN34 429 aa14.64□□□□□ -0.07
CUL4B-207ENST00000497616 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
CUL4B-207ENST00000497616 CHADLQ6NUI6 762 aa14.57□□□□□ -0.08
CUL4B-207ENST00000497616 PKD2Q13563 968 aa14.54□□□□□ -0.08
CUL4B-207ENST00000497616 PRKAR2AP13861 404 aaKnown RBP14.53□□□□□ -0.08
CUL4B-207ENST00000497616 NUBP1P53384 320 aa14.53□□□□□ -0.08
CUL4B-207ENST00000497616 PIP4P2Q8N4L2 257 aa14.52□□□□□ -0.09
CUL4B-207ENST00000497616 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
CUL4B-207ENST00000497616 FARP1Q9Y4F1 1045 aaPredicted RBP14.47□□□□□ -0.09
CUL4B-207ENST00000497616 CIZ1Q9ULV3 898 aaPredicted RBP14.42□□□□□ -0.1
CUL4B-207ENST00000497616 GSE1Q14687 1217 aa14.4□□□□□ -0.1
CUL4B-207ENST00000497616 RASEFQ8IZ41 740 aa14.4□□□□□ -0.1
CUL4B-207ENST00000497616 ECM2O94769 699 aaPredicted RBP14.37□□□□□ -0.11
CUL4B-207ENST00000497616 FAM212AQ96EL1 285 aa14.37□□□□□ -0.11
CUL4B-207ENST00000497616 DCAF8Q5TAQ9 597 aa14.35□□□□□ -0.11
CUL4B-207ENST00000497616 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
CUL4B-207ENST00000497616 RGL2O15211 777 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms