RNA–Protein interactions for RNA: ENST00000497537.1

GOLGA4-210, Transcript of golgin A4, humanhuman

TSL 1 (best)

Gene GOLGA4, Length 332 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA4-210ENST00000497537 AEBP2Q6ZN18 517 aaPredicted RBP21.98■■□□□ 1.11
GOLGA4-210ENST00000497537 CHIC1Q5VXU3 224 aa21.13■□□□□ 0.97
GOLGA4-210ENST00000497537 PHF23Q9BUL5 403 aaPredicted RBP18.7■□□□□ 0.58
GOLGA4-210ENST00000497537 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
GOLGA4-210ENST00000497537 FOXD1Q16676 465 aa17.3■□□□□ 0.36
GOLGA4-210ENST00000497537 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
GOLGA4-210ENST00000497537 PPP6R1Q9UPN7 881 aa16.6■□□□□ 0.25
GOLGA4-210ENST00000497537 ADRA2BP18089 450 aa16.55■□□□□ 0.24
GOLGA4-210ENST00000497537 PIAS4Q8N2W9 510 aaPredicted RBP16.21■□□□□ 0.19
GOLGA4-210ENST00000497537 MSH5O43196 834 aa15.83■□□□□ 0.12
GOLGA4-210ENST00000497537 POTEDQ86YR6 584 aa15.37■□□□□ 0.05
GOLGA4-210ENST00000497537 MAPK8IP2Q13387 824 aaPredicted RBP15.12■□□□□ 0.01
GOLGA4-210ENST00000497537 PPP4R3CPQ6ZMV5 832 aa15.04■□□□□ -0
GOLGA4-210ENST00000497537 SCAF1Q9H7N4 1312 aaKnown RBP14.84□□□□□ -0.03
GOLGA4-210ENST00000497537 DMRT2Q9Y5R5 561 aa14.74□□□□□ -0.05
GOLGA4-210ENST00000497537 KCNA4P22459 653 aa14.58□□□□□ -0.08
GOLGA4-210ENST00000497537 CNKSR2Q8WXI2 1034 aa14.57□□□□□ -0.08
GOLGA4-210ENST00000497537 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
GOLGA4-210ENST00000497537 NPM3O75607 178 aaKnown RBP14.42□□□□□ -0.1
GOLGA4-210ENST00000497537 HOXD11P31277 338 aaPredicted RBP14.35□□□□□ -0.11
GOLGA4-210ENST00000497537 RNF216Q9NWF9 866 aaPredicted RBP14.33□□□□□ -0.12
GOLGA4-210ENST00000497537 DCAF8L1A6NGE4 600 aa14.19□□□□□ -0.14
GOLGA4-210ENST00000497537 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
GOLGA4-210ENST00000497537 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
GOLGA4-210ENST00000497537 SLC4A2P04920 1241 aa13.71□□□□□ -0.21
GOLGA4-210ENST00000497537 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.226e-9■■■□□ 17.9
GOLGA4-210ENST00000497537 RNF39Q9H2S5 420 aa13.65□□□□□ -0.22
GOLGA4-210ENST00000497537 U3KPZ7 1027 aaPredicted RBP13.53□□□□□ -0.24
GOLGA4-210ENST00000497537 ZBTB22O15209 634 aa13.49□□□□□ -0.25
GOLGA4-210ENST00000497537 CACNB1Q02641 598 aaPredicted RBP13.46□□□□□ -0.25
GOLGA4-210ENST00000497537 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
GOLGA4-210ENST00000497537 FOXD4L1Q9NU39 408 aa13.34□□□□□ -0.27
GOLGA4-210ENST00000497537 EHMT2Q96KQ7 1210 aa13.29□□□□□ -0.28
GOLGA4-210ENST00000497537 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
GOLGA4-210ENST00000497537 MYCNP04198 464 aaPredicted RBP13.21□□□□□ -0.29
GOLGA4-210ENST00000497537 CSRNP3Q8WYN3 585 aa13.18□□□□□ -0.3
GOLGA4-210ENST00000497537 CAPN15O75808 1086 aa13.12□□□□□ -0.31
GOLGA4-210ENST00000497537 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
GOLGA4-210ENST00000497537 TRHP20396 242 aaPredicted RBP13.05□□□□□ -0.32
GOLGA4-210ENST00000497537 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
GOLGA4-210ENST00000497537 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
GOLGA4-210ENST00000497537 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
GOLGA4-210ENST00000497537 ABCB7O75027 752 aa12.96□□□□□ -0.33
GOLGA4-210ENST00000497537 DSG3P32926 999 aa12.95□□□□□ -0.34
GOLGA4-210ENST00000497537 APLP2Q06481 763 aa12.89□□□□□ -0.35
GOLGA4-210ENST00000497537 ZNF219Q9P2Y4 722 aaPredicted RBP12.88□□□□□ -0.35
GOLGA4-210ENST00000497537 ATXN8OSP0DMR3 200 aa12.78□□□□□ -0.36
GOLGA4-210ENST00000497537 POLA2Q14181 598 aa12.78□□□□□ -0.36
GOLGA4-210ENST00000497537 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
GOLGA4-210ENST00000497537 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
GOLGA4-210ENST00000497537 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
GOLGA4-210ENST00000497537 FBLN2P98095 1184 aa12.3□□□□□ -0.44
GOLGA4-210ENST00000497537 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
GOLGA4-210ENST00000497537 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
GOLGA4-210ENST00000497537 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
GOLGA4-210ENST00000497537 SPDYE2Q495Y8 402 aa12.08□□□□□ -0.48
GOLGA4-210ENST00000497537 ZNF692Q9BU19 519 aaPredicted RBP12.08□□□□□ -0.48
GOLGA4-210ENST00000497537 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
GOLGA4-210ENST00000497537 POTEHQ6S545 545 aa12.04□□□□□ -0.48
GOLGA4-210ENST00000497537 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
GOLGA4-210ENST00000497537 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
GOLGA4-210ENST00000497537 SPDYE4A6NLX3 237 aa11.99□□□□□ -0.49
GOLGA4-210ENST00000497537 PABPN1Q86U42 306 aaKnown RBP eCLIP11.96□□□□□ -0.49
GOLGA4-210ENST00000497537 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
GOLGA4-210ENST00000497537 FKBP8Q14318 412 aa11.9□□□□□ -0.5
GOLGA4-210ENST00000497537 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
GOLGA4-210ENST00000497537 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
GOLGA4-210ENST00000497537 SPDYE1Q8NFV5 336 aaPredicted RBP11.77□□□□□ -0.53
GOLGA4-210ENST00000497537 PROM2Q8N271 834 aa11.75□□□□□ -0.53
GOLGA4-210ENST00000497537 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
GOLGA4-210ENST00000497537 FXR2P51116 673 aaKnown RBP eCLIP11.68□□□□□ -0.546e-7■■□□□ 13.8
GOLGA4-210ENST00000497537 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
GOLGA4-210ENST00000497537 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
GOLGA4-210ENST00000497537 PRKAR2AP13861 404 aaKnown RBP11.6□□□□□ -0.55
GOLGA4-210ENST00000497537 CREBZFQ9NS37 354 aa11.54□□□□□ -0.56
GOLGA4-210ENST00000497537 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
GOLGA4-210ENST00000497537 EVX2Q03828 476 aa11.43□□□□□ -0.58
GOLGA4-210ENST00000497537 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
GOLGA4-210ENST00000497537 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
GOLGA4-210ENST00000497537 MIER1Q8N108 512 aa11.39□□□□□ -0.59
GOLGA4-210ENST00000497537 HAX1O00165 279 aa11.37□□□□□ -0.59
GOLGA4-210ENST00000497537 PLCD3Q8N3E9 789 aa11.33□□□□□ -0.6
GOLGA4-210ENST00000497537 VASPP50552 380 aaPredicted RBP11.32□□□□□ -0.6
GOLGA4-210ENST00000497537 FBXO3Q9UK99 471 aa11.31□□□□□ -0.6
GOLGA4-210ENST00000497537 C19orf67A6NJJ6 358 aa11.3□□□□□ -0.6
GOLGA4-210ENST00000497537 SP7Q8TDD2 431 aaPredicted RBP11.26□□□□□ -0.61
GOLGA4-210ENST00000497537 CD44P16070 742 aaKnown RBP11.24□□□□□ -0.61
GOLGA4-210ENST00000497537 IFNLR1Q8IU57 520 aaPredicted RBP11.22□□□□□ -0.61
GOLGA4-210ENST00000497537 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
GOLGA4-210ENST00000497537 NPM1P06748 294 aaKnown RBP eCLIP11.17□□□□□ -0.62
GOLGA4-210ENST00000497537 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
GOLGA4-210ENST00000497537 PLEKHG5O94827 1062 aa11.16□□□□□ -0.62
GOLGA4-210ENST00000497537 NUBP1P53384 320 aa11.16□□□□□ -0.62
GOLGA4-210ENST00000497537 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
GOLGA4-210ENST00000497537 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
GOLGA4-210ENST00000497537 PHF12Q96QT6 1004 aa11.13□□□□□ -0.63
GOLGA4-210ENST00000497537 GABBR2O75899 941 aa11.06□□□□□ -0.64
GOLGA4-210ENST00000497537 ZNF579Q8NAF0 562 aaKnown RBP11.05□□□□□ -0.64
GOLGA4-210ENST00000497537 ZBTB47Q9UFB7 747 aaPredicted RBP11.05□□□□□ -0.64
GOLGA4-210ENST00000497537 CCDC61Q9Y6R9 512 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms