RNA–Protein interactions for RNA: ENST00000497385.1

PTGFRN-203, Transcript of prostaglandin F2 receptor inhibitor, humanhuman

TSL 3

Gene PTGFRN, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGFRN-203ENST00000497385 AEBP2Q6ZN18 517 aaPredicted RBP24.71■■□□□ 1.55
PTGFRN-203ENST00000497385 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
PTGFRN-203ENST00000497385 SENP3Q9H4L4 574 aaPredicted RBP21.24■□□□□ 0.99
PTGFRN-203ENST00000497385 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
PTGFRN-203ENST00000497385 FOXD1Q16676 465 aa19.82■□□□□ 0.76
PTGFRN-203ENST00000497385 POTEDQ86YR6 584 aa19.39■□□□□ 0.69
PTGFRN-203ENST00000497385 MSH5O43196 834 aa18.85■□□□□ 0.61
PTGFRN-203ENST00000497385 PIAS4Q8N2W9 510 aaPredicted RBP18.36■□□□□ 0.53
PTGFRN-203ENST00000497385 PLPPR3Q6T4P5 718 aa18.04■□□□□ 0.48
PTGFRN-203ENST00000497385 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
PTGFRN-203ENST00000497385 ADRA2BP18089 450 aa17.92■□□□□ 0.46
PTGFRN-203ENST00000497385 DMRT2Q9Y5R5 561 aa16.74■□□□□ 0.27
PTGFRN-203ENST00000497385 MAPK8IP2Q13387 824 aaPredicted RBP16.65■□□□□ 0.26
PTGFRN-203ENST00000497385 SCAF1Q9H7N4 1312 aaKnown RBP16.5■□□□□ 0.23
PTGFRN-203ENST00000497385 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
PTGFRN-203ENST00000497385 RNF39Q9H2S5 420 aa16.01■□□□□ 0.15
PTGFRN-203ENST00000497385 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
PTGFRN-203ENST00000497385 HOXD11P31277 338 aaPredicted RBP15.9■□□□□ 0.14
PTGFRN-203ENST00000497385 C1QBPQ07021 282 aaKnown RBP15.76■□□□□ 0.11
PTGFRN-203ENST00000497385 PPP4R3CPQ6ZMV5 832 aa15.7■□□□□ 0.1
PTGFRN-203ENST00000497385 RNF216Q9NWF9 866 aaPredicted RBP15.61■□□□□ 0.09
PTGFRN-203ENST00000497385 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
PTGFRN-203ENST00000497385 DNAJC5BQ9UF47 199 aa15.56■□□□□ 0.08
PTGFRN-203ENST00000497385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.09■□□□□ 0.01
PTGFRN-203ENST00000497385 POTEHQ6S545 545 aa15.08■□□□□ 0
PTGFRN-203ENST00000497385 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
PTGFRN-203ENST00000497385 DSG3P32926 999 aa14.76□□□□□ -0.05
PTGFRN-203ENST00000497385 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
PTGFRN-203ENST00000497385 NPM3O75607 178 aaKnown RBP14.69□□□□□ -0.06
PTGFRN-203ENST00000497385 CAPN15O75808 1086 aa14.66□□□□□ -0.06
PTGFRN-203ENST00000497385 SPINK5Q9NQ38 1064 aaPredicted RBP14.65□□□□□ -0.06
PTGFRN-203ENST00000497385 APLP2Q06481 763 aa14.31□□□□□ -0.12
PTGFRN-203ENST00000497385 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
PTGFRN-203ENST00000497385 TRHP20396 242 aaPredicted RBP14.27□□□□□ -0.13
PTGFRN-203ENST00000497385 ABCB7O75027 752 aa14.24□□□□□ -0.13
PTGFRN-203ENST00000497385 SLC4A2P04920 1241 aa14.19□□□□□ -0.14
PTGFRN-203ENST00000497385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
PTGFRN-203ENST00000497385 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
PTGFRN-203ENST00000497385 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
PTGFRN-203ENST00000497385 CHRDL2Q6WN34 429 aa14.04□□□□□ -0.16
PTGFRN-203ENST00000497385 SAMD1Q6SPF0 538 aaPredicted RBP14.02□□□□□ -0.17
PTGFRN-203ENST00000497385 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
PTGFRN-203ENST00000497385 KCNA4P22459 653 aa13.82□□□□□ -0.2
PTGFRN-203ENST00000497385 POLA2Q14181 598 aa13.77□□□□□ -0.21
PTGFRN-203ENST00000497385 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
PTGFRN-203ENST00000497385 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
PTGFRN-203ENST00000497385 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
PTGFRN-203ENST00000497385 REM2Q8IYK8 340 aaPredicted RBP13.52□□□□□ -0.25
PTGFRN-203ENST00000497385 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
PTGFRN-203ENST00000497385 HAX1O00165 279 aa13.47□□□□□ -0.25
PTGFRN-203ENST00000497385 FXR2P51116 673 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTGFRN-203ENST00000497385 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
PTGFRN-203ENST00000497385 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
PTGFRN-203ENST00000497385 ATF5Q9Y2D1 282 aaPredicted RBP13.3□□□□□ -0.28
PTGFRN-203ENST00000497385 EVX2Q03828 476 aa13.24□□□□□ -0.29
PTGFRN-203ENST00000497385 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
PTGFRN-203ENST00000497385 SPDYE2BA6NHP3 402 aa13.03□□□□□ -0.32
PTGFRN-203ENST00000497385 SPDYE6P0CI01 402 aa13.03□□□□□ -0.32
PTGFRN-203ENST00000497385 SPDYE2Q495Y8 402 aa13.03□□□□□ -0.32
PTGFRN-203ENST00000497385 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
PTGFRN-203ENST00000497385 PRKAR2AP13861 404 aaKnown RBP13.01□□□□□ -0.33
PTGFRN-203ENST00000497385 LHX8Q68G74 356 aa12.98□□□□□ -0.33
PTGFRN-203ENST00000497385 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
PTGFRN-203ENST00000497385 GABBR2O75899 941 aa12.94□□□□□ -0.34
PTGFRN-203ENST00000497385 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
PTGFRN-203ENST00000497385 FBLN2P98095 1184 aa12.88□□□□□ -0.35
PTGFRN-203ENST00000497385 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
PTGFRN-203ENST00000497385 ATXN8OSP0DMR3 200 aa12.87□□□□□ -0.35
PTGFRN-203ENST00000497385 SSUH2Q9Y2M2 353 aa12.78□□□□□ -0.36
PTGFRN-203ENST00000497385 ZNF692Q9BU19 519 aaPredicted RBP12.73□□□□□ -0.37
PTGFRN-203ENST00000497385 ZBTB22O15209 634 aa12.69□□□□□ -0.38
PTGFRN-203ENST00000497385 CHADLQ6NUI6 762 aa12.69□□□□□ -0.38
PTGFRN-203ENST00000497385 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
PTGFRN-203ENST00000497385 POTEIP0CG38 1075 aa12.65□□□□□ -0.38
PTGFRN-203ENST00000497385 CLCN6P51797 869 aa12.64□□□□□ -0.39
PTGFRN-203ENST00000497385 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
PTGFRN-203ENST00000497385 PLSCR2Q9NRY7 297 aa12.6□□□□□ -0.39
PTGFRN-203ENST00000497385 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
PTGFRN-203ENST00000497385 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTGFRN-203ENST00000497385 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
PTGFRN-203ENST00000497385 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
PTGFRN-203ENST00000497385 ZNF579Q8NAF0 562 aaKnown RBP12.38□□□□□ -0.43
PTGFRN-203ENST00000497385 OTUD5Q96G74 571 aa12.31□□□□□ -0.44
PTGFRN-203ENST00000497385 ZRANB1Q9UGI0 708 aa12.28□□□□□ -0.44
PTGFRN-203ENST00000497385 POTEMA6NI47 508 aa12.24□□□□□ -0.45
PTGFRN-203ENST00000497385 GALR2O43603 387 aaPredicted RBP12.22□□□□□ -0.45
PTGFRN-203ENST00000497385 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
PTGFRN-203ENST00000497385 POTEGQ6S5H5 508 aa12.18□□□□□ -0.46
PTGFRN-203ENST00000497385 PCDH10Q9P2E7 1040 aa12.17□□□□□ -0.46
PTGFRN-203ENST00000497385 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
PTGFRN-203ENST00000497385 STAG3Q9UJ98 1225 aa12.11□□□□□ -0.47
PTGFRN-203ENST00000497385 PAK3O75914 559 aaPredicted RBP12.08□□□□□ -0.48
PTGFRN-203ENST00000497385 PELP1Q8IZL8 1130 aaKnown RBP12.04□□□□□ -0.48
PTGFRN-203ENST00000497385 PHF12Q96QT6 1004 aa12.04□□□□□ -0.48
PTGFRN-203ENST00000497385 ASTLQ6HA08 431 aaPredicted RBP11.98□□□□□ -0.49
PTGFRN-203ENST00000497385 MAMSTRQ6ZN01 415 aa11.98□□□□□ -0.49
PTGFRN-203ENST00000497385 C7P10643 843 aa11.97□□□□□ -0.49
PTGFRN-203ENST00000497385 METRNQ9UJH8 293 aa11.97□□□□□ -0.49
PTGFRN-203ENST00000497385 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
PTGFRN-203ENST00000497385 SLC39A7Q92504 469 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms