RNA–Protein interactions for RNA: ENST00000497356.1

GNL3-212, Transcript of G protein nucleolar 3, humanhuman

TSL 2

Gene GNL3, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNL3-212ENST00000497356 AEBP2Q6ZN18 517 aaPredicted RBP30.11■■■□□ 2.41
GNL3-212ENST00000497356 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
GNL3-212ENST00000497356 PHF23Q9BUL5 403 aaPredicted RBP25.55■■□□□ 1.68
GNL3-212ENST00000497356 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
GNL3-212ENST00000497356 FOXD1Q16676 465 aa23.72■■□□□ 1.39
GNL3-212ENST00000497356 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
GNL3-212ENST00000497356 PPP6R1Q9UPN7 881 aa22.67■■□□□ 1.22
GNL3-212ENST00000497356 ADRA2BP18089 450 aa22.59■■□□□ 1.21
GNL3-212ENST00000497356 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
GNL3-212ENST00000497356 MSH5O43196 834 aa21.75■■□□□ 1.07
GNL3-212ENST00000497356 MAPK8IP2Q13387 824 aaPredicted RBP20.65■□□□□ 0.9
GNL3-212ENST00000497356 POTEDQ86YR6 584 aa20.59■□□□□ 0.89
GNL3-212ENST00000497356 PPP4R3CPQ6ZMV5 832 aa20.52■□□□□ 0.88
GNL3-212ENST00000497356 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
GNL3-212ENST00000497356 DMRT2Q9Y5R5 561 aa20.22■□□□□ 0.83
GNL3-212ENST00000497356 CNKSR2Q8WXI2 1034 aa19.91■□□□□ 0.78
GNL3-212ENST00000497356 KCNA4P22459 653 aa19.79■□□□□ 0.76
GNL3-212ENST00000497356 HOXD11P31277 338 aaPredicted RBP19.67■□□□□ 0.74
GNL3-212ENST00000497356 NCBP3Q53F19 620 aaKnown RBP19.66■□□□□ 0.74
GNL3-212ENST00000497356 NPM3O75607 178 aaKnown RBP19.64■□□□□ 0.73
GNL3-212ENST00000497356 RNF216Q9NWF9 866 aaPredicted RBP19.61■□□□□ 0.73
GNL3-212ENST00000497356 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
GNL3-212ENST00000497356 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
GNL3-212ENST00000497356 RNF39Q9H2S5 420 aa18.75■□□□□ 0.59
GNL3-212ENST00000497356 SLC4A2P04920 1241 aa18.7■□□□□ 0.58
GNL3-212ENST00000497356 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.69■□□□□ 0.582e-7■■□□□ 13
GNL3-212ENST00000497356 SLC4A1APQ9BWU0 796 aaKnown RBP18.65■□□□□ 0.58
GNL3-212ENST00000497356 U3KPZ7 1027 aaPredicted RBP18.51■□□□□ 0.55
GNL3-212ENST00000497356 CACNB1Q02641 598 aaPredicted RBP18.44■□□□□ 0.54
GNL3-212ENST00000497356 C1QBPQ07021 282 aaKnown RBP18.37■□□□□ 0.53
GNL3-212ENST00000497356 ZBTB22O15209 634 aa18.31■□□□□ 0.52
GNL3-212ENST00000497356 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
GNL3-212ENST00000497356 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
GNL3-212ENST00000497356 MYCNP04198 464 aaPredicted RBP18.01■□□□□ 0.47
GNL3-212ENST00000497356 CAPN15O75808 1086 aa17.93■□□□□ 0.46
GNL3-212ENST00000497356 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
GNL3-212ENST00000497356 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
GNL3-212ENST00000497356 CSRNP3Q8WYN3 585 aa17.83■□□□□ 0.44
GNL3-212ENST00000497356 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
GNL3-212ENST00000497356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.81■□□□□ 0.44
GNL3-212ENST00000497356 HNRNPUL2Q1KMD3 747 aaKnown RBP17.81■□□□□ 0.44
GNL3-212ENST00000497356 TRHP20396 242 aaPredicted RBP17.8■□□□□ 0.44
GNL3-212ENST00000497356 DSG3P32926 999 aa17.76■□□□□ 0.43
GNL3-212ENST00000497356 ABCB7O75027 752 aa17.69■□□□□ 0.42
GNL3-212ENST00000497356 APLP2Q06481 763 aa17.63■□□□□ 0.41
GNL3-212ENST00000497356 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
GNL3-212ENST00000497356 POLA2Q14181 598 aa17.44■□□□□ 0.38
GNL3-212ENST00000497356 ATXN8OSP0DMR3 200 aa17.41■□□□□ 0.38
GNL3-212ENST00000497356 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
GNL3-212ENST00000497356 OSCARQ8IYS5 282 aa16.93■□□□□ 0.3
GNL3-212ENST00000497356 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
GNL3-212ENST00000497356 FBLN2P98095 1184 aa16.76■□□□□ 0.27
GNL3-212ENST00000497356 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
GNL3-212ENST00000497356 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
GNL3-212ENST00000497356 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
GNL3-212ENST00000497356 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
GNL3-212ENST00000497356 SPDYE2Q495Y8 402 aa16.5■□□□□ 0.23
GNL3-212ENST00000497356 REM2Q8IYK8 340 aaPredicted RBP16.47■□□□□ 0.23
GNL3-212ENST00000497356 ZNF692Q9BU19 519 aaPredicted RBP16.45■□□□□ 0.22
GNL3-212ENST00000497356 SSUH2Q9Y2M2 353 aa16.45■□□□□ 0.22
GNL3-212ENST00000497356 PITPNM1O00562 1244 aa16.34■□□□□ 0.21
GNL3-212ENST00000497356 CHRDL2Q6WN34 429 aa16.3■□□□□ 0.2
GNL3-212ENST00000497356 SPDYE4A6NLX3 237 aa16.29■□□□□ 0.2
GNL3-212ENST00000497356 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
GNL3-212ENST00000497356 POTEHQ6S545 545 aa16.17■□□□□ 0.18
GNL3-212ENST00000497356 CLEC11AQ9Y240 323 aa16.14■□□□□ 0.17
GNL3-212ENST00000497356 PIP4P2Q8N4L2 257 aa16.09■□□□□ 0.17
GNL3-212ENST00000497356 SPDYE1Q8NFV5 336 aaPredicted RBP16.08■□□□□ 0.16
GNL3-212ENST00000497356 FKBP8Q14318 412 aa16.07■□□□□ 0.16
GNL3-212ENST00000497356 FXR2P51116 673 aaKnown RBP eCLIP16.03■□□□□ 0.166e-14■■■□□ 18.4
GNL3-212ENST00000497356 PROM2Q8N271 834 aa16.02■□□□□ 0.16
GNL3-212ENST00000497356 CHADLQ6NUI6 762 aa15.92■□□□□ 0.14
GNL3-212ENST00000497356 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
GNL3-212ENST00000497356 PRKAR2AP13861 404 aaKnown RBP15.87■□□□□ 0.13
GNL3-212ENST00000497356 CREBZFQ9NS37 354 aa15.75■□□□□ 0.11
GNL3-212ENST00000497356 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
GNL3-212ENST00000497356 EVX2Q03828 476 aa15.67■□□□□ 0.1
GNL3-212ENST00000497356 FARP1Q9Y4F1 1045 aaPredicted RBP15.6■□□□□ 0.09
GNL3-212ENST00000497356 HAX1O00165 279 aa15.58■□□□□ 0.08
GNL3-212ENST00000497356 MNX1P50219 401 aaPredicted RBP15.57■□□□□ 0.08
GNL3-212ENST00000497356 C19orf67A6NJJ6 358 aa15.5■□□□□ 0.07
GNL3-212ENST00000497356 MIER1Q8N108 512 aa15.44■□□□□ 0.06
GNL3-212ENST00000497356 CD44P16070 742 aaKnown RBP15.38■□□□□ 0.05
GNL3-212ENST00000497356 SP7Q8TDD2 431 aaPredicted RBP15.38■□□□□ 0.05
GNL3-212ENST00000497356 PLCD3Q8N3E9 789 aa15.36■□□□□ 0.05
GNL3-212ENST00000497356 VASPP50552 380 aaPredicted RBP15.33■□□□□ 0.04
GNL3-212ENST00000497356 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
GNL3-212ENST00000497356 RASEFQ8IZ41 740 aa15.25■□□□□ 0.03
GNL3-212ENST00000497356 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
GNL3-212ENST00000497356 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
GNL3-212ENST00000497356 IFNLR1Q8IU57 520 aaPredicted RBP15.2■□□□□ 0.02
GNL3-212ENST00000497356 NUBP1P53384 320 aa15.19■□□□□ 0.02
GNL3-212ENST00000497356 PHF12Q96QT6 1004 aa15.19■□□□□ 0.02
GNL3-212ENST00000497356 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
GNL3-212ENST00000497356 GABBR2O75899 941 aa15.17■□□□□ 0.02
GNL3-212ENST00000497356 PLEKHG5O94827 1062 aa15.16■□□□□ 0.02
GNL3-212ENST00000497356 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
GNL3-212ENST00000497356 CCDC61Q9Y6R9 512 aa15.09■□□□□ 0.01
GNL3-212ENST00000497356 KLHL34Q8N239 644 aa15.07■□□□□ 0
GNL3-212ENST00000497356 GALR2O43603 387 aaPredicted RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms