RNA–Protein interactions for RNA: ENST00000497335.1

BRWD3-205, Transcript of bromodomain and WD repeat domain containing 3, humanhuman

TSL 3

Gene BRWD3, Length 959 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3-205ENST00000497335 AEBP2Q6ZN18 517 aaPredicted RBP31.82■■■□□ 2.68
BRWD3-205ENST00000497335 CHIC1Q5VXU3 224 aa31.26■■■□□ 2.59
BRWD3-205ENST00000497335 PHF23Q9BUL5 403 aaPredicted RBP27.43■■□□□ 1.98
BRWD3-205ENST00000497335 SENP3Q9H4L4 574 aaPredicted RBP27.12■■□□□ 1.93
BRWD3-205ENST00000497335 PLPPR3Q6T4P5 718 aa25.49■■□□□ 1.67
BRWD3-205ENST00000497335 FOXD1Q16676 465 aa25.06■■□□□ 1.6
BRWD3-205ENST00000497335 ADRA2BP18089 450 aa24.16■■□□□ 1.46
BRWD3-205ENST00000497335 PPP6R1Q9UPN7 881 aa24.15■■□□□ 1.46
BRWD3-205ENST00000497335 PIAS4Q8N2W9 510 aaPredicted RBP23.72■■□□□ 1.39
BRWD3-205ENST00000497335 MSH5O43196 834 aa23.18■■□□□ 1.3
BRWD3-205ENST00000497335 PPP4R3CPQ6ZMV5 832 aa22.42■■□□□ 1.18
BRWD3-205ENST00000497335 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
BRWD3-205ENST00000497335 KCNA4P22459 653 aa21.98■■□□□ 1.11
BRWD3-205ENST00000497335 NCBP3Q53F19 620 aaKnown RBP21.95■■□□□ 1.1
BRWD3-205ENST00000497335 MAPK8IP2Q13387 824 aaPredicted RBP21.86■■□□□ 1.09
BRWD3-205ENST00000497335 CNKSR2Q8WXI2 1034 aa21.81■■□□□ 1.08
BRWD3-205ENST00000497335 DMRT2Q9Y5R5 561 aa21.64■■□□□ 1.05
BRWD3-205ENST00000497335 NPM3O75607 178 aaKnown RBP21.53■■□□□ 1.04
BRWD3-205ENST00000497335 RNF216Q9NWF9 866 aaPredicted RBP21.36■■□□□ 1.01
BRWD3-205ENST00000497335 HOXD11P31277 338 aaPredicted RBP21.22■□□□□ 0.99
BRWD3-205ENST00000497335 SLC4A1APQ9BWU0 796 aaKnown RBP21.01■□□□□ 0.95
BRWD3-205ENST00000497335 DNAJC5BQ9UF47 199 aa20.97■□□□□ 0.95
BRWD3-205ENST00000497335 POTEDQ86YR6 584 aa20.83■□□□□ 0.93
BRWD3-205ENST00000497335 DCAF8L1A6NGE4 600 aa20.68■□□□□ 0.9
BRWD3-205ENST00000497335 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
BRWD3-205ENST00000497335 SLC4A2P04920 1241 aa20.27■□□□□ 0.84
BRWD3-205ENST00000497335 FOXD4L1Q9NU39 408 aa20.27■□□□□ 0.84
BRWD3-205ENST00000497335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.25■□□□□ 0.83
BRWD3-205ENST00000497335 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
BRWD3-205ENST00000497335 ZBTB22O15209 634 aa20.18■□□□□ 0.82
BRWD3-205ENST00000497335 MYCNP04198 464 aaPredicted RBP19.96■□□□□ 0.79
BRWD3-205ENST00000497335 U3KPZ7 1027 aaPredicted RBP19.88■□□□□ 0.77
BRWD3-205ENST00000497335 RNF39Q9H2S5 420 aa19.82■□□□□ 0.76
BRWD3-205ENST00000497335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.81■□□□□ 0.76
BRWD3-205ENST00000497335 HNRNPUL2Q1KMD3 747 aaKnown RBP19.81■□□□□ 0.76
BRWD3-205ENST00000497335 SAMD1Q6SPF0 538 aaPredicted RBP19.7■□□□□ 0.74
BRWD3-205ENST00000497335 C1QBPQ07021 282 aaKnown RBP19.64■□□□□ 0.73
BRWD3-205ENST00000497335 APLP2Q06481 763 aa19.6■□□□□ 0.73
BRWD3-205ENST00000497335 ATXN8OSP0DMR3 200 aa19.59■□□□□ 0.73
BRWD3-205ENST00000497335 ATF5Q9Y2D1 282 aaPredicted RBP19.28■□□□□ 0.68
BRWD3-205ENST00000497335 SPINK5Q9NQ38 1064 aaPredicted RBP19.26■□□□□ 0.67
BRWD3-205ENST00000497335 CAPN15O75808 1086 aa19.25■□□□□ 0.67
BRWD3-205ENST00000497335 CACNB1Q02641 598 aaPredicted RBP19.24■□□□□ 0.67
BRWD3-205ENST00000497335 ZNF219Q9P2Y4 722 aaPredicted RBP19.24■□□□□ 0.67
BRWD3-205ENST00000497335 TRHP20396 242 aaPredicted RBP19.16■□□□□ 0.66
BRWD3-205ENST00000497335 DSG3P32926 999 aa18.88■□□□□ 0.61
BRWD3-205ENST00000497335 POLA2Q14181 598 aa18.88■□□□□ 0.61
BRWD3-205ENST00000497335 ABCB7O75027 752 aa18.84■□□□□ 0.61
BRWD3-205ENST00000497335 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
BRWD3-205ENST00000497335 FBLN2P98095 1184 aa18.62■□□□□ 0.57
BRWD3-205ENST00000497335 MKRN4PQ13434 485 aaPredicted RBP18.48■□□□□ 0.55
BRWD3-205ENST00000497335 FKBP8Q14318 412 aa18.28■□□□□ 0.52
BRWD3-205ENST00000497335 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
BRWD3-205ENST00000497335 SPDYE4A6NLX3 237 aa18.19■□□□□ 0.5
BRWD3-205ENST00000497335 SPDYE2BA6NHP3 402 aa18.14■□□□□ 0.49
BRWD3-205ENST00000497335 SPDYE6P0CI01 402 aa18.14■□□□□ 0.49
BRWD3-205ENST00000497335 SPDYE2Q495Y8 402 aa18.14■□□□□ 0.49
BRWD3-205ENST00000497335 RBM42Q9BTD8 480 aaKnown RBP18.09■□□□□ 0.49
BRWD3-205ENST00000497335 ZNF692Q9BU19 519 aaPredicted RBP18.06■□□□□ 0.48
BRWD3-205ENST00000497335 SSUH2Q9Y2M2 353 aa17.97■□□□□ 0.47
BRWD3-205ENST00000497335 PROM2Q8N271 834 aa17.89■□□□□ 0.45
BRWD3-205ENST00000497335 AKT1S1Q96B36 256 aa17.84■□□□□ 0.45
BRWD3-205ENST00000497335 PABPN1Q86U42 306 aaKnown RBP eCLIP17.81■□□□□ 0.44
BRWD3-205ENST00000497335 FBXO3Q9UK99 471 aa17.7■□□□□ 0.42
BRWD3-205ENST00000497335 REM2Q8IYK8 340 aaPredicted RBP17.63■□□□□ 0.41
BRWD3-205ENST00000497335 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
BRWD3-205ENST00000497335 SPDYE1Q8NFV5 336 aaPredicted RBP17.59■□□□□ 0.41
BRWD3-205ENST00000497335 CLEC11AQ9Y240 323 aa17.46■□□□□ 0.39
BRWD3-205ENST00000497335 PITPNM1O00562 1244 aa17.42■□□□□ 0.38
BRWD3-205ENST00000497335 VASPP50552 380 aaPredicted RBP17.39■□□□□ 0.37
BRWD3-205ENST00000497335 PRR29P0C7W0 189 aa17.34■□□□□ 0.37
BRWD3-205ENST00000497335 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
BRWD3-205ENST00000497335 PLCD3Q8N3E9 789 aa17.25■□□□□ 0.35
BRWD3-205ENST00000497335 MIER1Q8N108 512 aa17.24■□□□□ 0.35
BRWD3-205ENST00000497335 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
BRWD3-205ENST00000497335 ZBTB47Q9UFB7 747 aaPredicted RBP17.13■□□□□ 0.33
BRWD3-205ENST00000497335 IFNLR1Q8IU57 520 aaPredicted RBP17.11■□□□□ 0.33
BRWD3-205ENST00000497335 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
BRWD3-205ENST00000497335 FXR2P51116 673 aaKnown RBP eCLIP17.08■□□□□ 0.32
BRWD3-205ENST00000497335 KLHL34Q8N239 644 aa17.08■□□□□ 0.32
BRWD3-205ENST00000497335 PIP4P2Q8N4L2 257 aa17.01■□□□□ 0.31
BRWD3-205ENST00000497335 PRKAR2AP13861 404 aaKnown RBP17■□□□□ 0.31
BRWD3-205ENST00000497335 CHADLQ6NUI6 762 aa16.96■□□□□ 0.31
BRWD3-205ENST00000497335 SPOCK2Q92563 424 aa16.96■□□□□ 0.31
BRWD3-205ENST00000497335 NPM1P06748 294 aaKnown RBP eCLIP16.91■□□□□ 0.3
BRWD3-205ENST00000497335 MNX1P50219 401 aaPredicted RBP16.91■□□□□ 0.3
BRWD3-205ENST00000497335 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
BRWD3-205ENST00000497335 FARP1Q9Y4F1 1045 aaPredicted RBP16.88■□□□□ 0.29
BRWD3-205ENST00000497335 NUBP1P53384 320 aa16.76■□□□□ 0.27
BRWD3-205ENST00000497335 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
BRWD3-205ENST00000497335 FAM212AQ96EL1 285 aa16.7■□□□□ 0.26
BRWD3-205ENST00000497335 GSE1Q14687 1217 aa16.68■□□□□ 0.26
BRWD3-205ENST00000497335 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
BRWD3-205ENST00000497335 CIZ1Q9ULV3 898 aaPredicted RBP16.65■□□□□ 0.26
BRWD3-205ENST00000497335 DCAF8Q5TAQ9 597 aa16.63■□□□□ 0.25
BRWD3-205ENST00000497335 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
BRWD3-205ENST00000497335 TRIM41Q8WV44 630 aa16.58■□□□□ 0.24
BRWD3-205ENST00000497335 PKD2Q13563 968 aa16.57■□□□□ 0.24
BRWD3-205ENST00000497335 POTEHQ6S545 545 aa16.56■□□□□ 0.24
BRWD3-205ENST00000497335 TSPYL2Q9H2G4 693 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms