RNA–Protein interactions for RNA: ENST00000497315.5

PSMD6-211, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 3

Gene PSMD6, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-211ENST00000497315 AEBP2Q6ZN18 517 aaPredicted RBP24.62■■□□□ 1.53
PSMD6-211ENST00000497315 CHIC1Q5VXU3 224 aa24.22■■□□□ 1.47
PSMD6-211ENST00000497315 PHF23Q9BUL5 403 aaPredicted RBP21.34■■□□□ 1.01
PSMD6-211ENST00000497315 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
PSMD6-211ENST00000497315 PLPPR3Q6T4P5 718 aa19.76■□□□□ 0.75
PSMD6-211ENST00000497315 FOXD1Q16676 465 aa19.34■□□□□ 0.69
PSMD6-211ENST00000497315 ADRA2BP18089 450 aa18.79■□□□□ 0.6
PSMD6-211ENST00000497315 PPP6R1Q9UPN7 881 aa18.78■□□□□ 0.6
PSMD6-211ENST00000497315 PIAS4Q8N2W9 510 aaPredicted RBP18.31■□□□□ 0.52
PSMD6-211ENST00000497315 MSH5O43196 834 aa17.73■□□□□ 0.43
PSMD6-211ENST00000497315 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
PSMD6-211ENST00000497315 KCNA4P22459 653 aa17.29■□□□□ 0.36
PSMD6-211ENST00000497315 SCAF1Q9H7N4 1312 aaKnown RBP17.14■□□□□ 0.33
PSMD6-211ENST00000497315 NCBP3Q53F19 620 aaKnown RBP17.03■□□□□ 0.32
PSMD6-211ENST00000497315 MAPK8IP2Q13387 824 aaPredicted RBP16.99■□□□□ 0.31
PSMD6-211ENST00000497315 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
PSMD6-211ENST00000497315 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
PSMD6-211ENST00000497315 DMRT2Q9Y5R5 561 aa16.66■□□□□ 0.26
PSMD6-211ENST00000497315 RNF216Q9NWF9 866 aaPredicted RBP16.51■□□□□ 0.23
PSMD6-211ENST00000497315 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
PSMD6-211ENST00000497315 HOXD11P31277 338 aaPredicted RBP16.38■□□□□ 0.21
PSMD6-211ENST00000497315 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
PSMD6-211ENST00000497315 DNAJC5BQ9UF47 199 aa16.18■□□□□ 0.18
PSMD6-211ENST00000497315 DCAF8L1A6NGE4 600 aa16.02■□□□□ 0.16
PSMD6-211ENST00000497315 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
PSMD6-211ENST00000497315 ZBTB22O15209 634 aa15.91■□□□□ 0.14
PSMD6-211ENST00000497315 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
PSMD6-211ENST00000497315 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
PSMD6-211ENST00000497315 SLC4A2P04920 1241 aa15.81■□□□□ 0.12
PSMD6-211ENST00000497315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.67■□□□□ 0.19e-7■■■■□ 22.2
PSMD6-211ENST00000497315 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
PSMD6-211ENST00000497315 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
PSMD6-211ENST00000497315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
PSMD6-211ENST00000497315 HNRNPUL2Q1KMD3 747 aaKnown RBP15.26■□□□□ 0.03
PSMD6-211ENST00000497315 SAMD1Q6SPF0 538 aaPredicted RBP15.23■□□□□ 0.03
PSMD6-211ENST00000497315 ATXN8OSP0DMR3 200 aa15.22■□□□□ 0.03
PSMD6-211ENST00000497315 RNF39Q9H2S5 420 aa15.22■□□□□ 0.03
PSMD6-211ENST00000497315 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
PSMD6-211ENST00000497315 APLP2Q06481 763 aa15.05■□□□□ -0
PSMD6-211ENST00000497315 C1QBPQ07021 282 aaKnown RBP15.03■□□□□ -0
PSMD6-211ENST00000497315 SPINK5Q9NQ38 1064 aaPredicted RBP14.95□□□□□ -0.02
PSMD6-211ENST00000497315 CAPN15O75808 1086 aa14.9□□□□□ -0.02
PSMD6-211ENST00000497315 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
PSMD6-211ENST00000497315 ZNF219Q9P2Y4 722 aaPredicted RBP14.84□□□□□ -0.03
PSMD6-211ENST00000497315 CACNB1Q02641 598 aaPredicted RBP14.72□□□□□ -0.05
PSMD6-211ENST00000497315 POLA2Q14181 598 aa14.66□□□□□ -0.06
PSMD6-211ENST00000497315 ABCB7O75027 752 aa14.65□□□□□ -0.06
PSMD6-211ENST00000497315 DSG3P32926 999 aa14.56□□□□□ -0.08
PSMD6-211ENST00000497315 FBLN2P98095 1184 aa14.45□□□□□ -0.1
PSMD6-211ENST00000497315 MKRN4PQ13434 485 aaPredicted RBP14.45□□□□□ -0.1
PSMD6-211ENST00000497315 FKBP8Q14318 412 aa14.45□□□□□ -0.1
PSMD6-211ENST00000497315 ZBTB12Q9Y330 459 aaPredicted RBP14.39□□□□□ -0.11
PSMD6-211ENST00000497315 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
PSMD6-211ENST00000497315 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
PSMD6-211ENST00000497315 ZNF692Q9BU19 519 aaPredicted RBP14.04□□□□□ -0.16
PSMD6-211ENST00000497315 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
PSMD6-211ENST00000497315 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
PSMD6-211ENST00000497315 SPDYE2Q495Y8 402 aa14.03□□□□□ -0.16
PSMD6-211ENST00000497315 PROM2Q8N271 834 aa13.97□□□□□ -0.17
PSMD6-211ENST00000497315 SSUH2Q9Y2M2 353 aa13.93□□□□□ -0.18
PSMD6-211ENST00000497315 PABPN1Q86U42 306 aaKnown RBP eCLIP13.86□□□□□ -0.19
PSMD6-211ENST00000497315 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
PSMD6-211ENST00000497315 FBXO3Q9UK99 471 aa13.84□□□□□ -0.19
PSMD6-211ENST00000497315 AKT1S1Q96B36 256 aa13.73□□□□□ -0.21
PSMD6-211ENST00000497315 VASPP50552 380 aaPredicted RBP13.66□□□□□ -0.22
PSMD6-211ENST00000497315 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
PSMD6-211ENST00000497315 REM2Q8IYK8 340 aaPredicted RBP13.61□□□□□ -0.23
PSMD6-211ENST00000497315 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
PSMD6-211ENST00000497315 CLEC11AQ9Y240 323 aa13.56□□□□□ -0.24
PSMD6-211ENST00000497315 IFNLR1Q8IU57 520 aaPredicted RBP13.5□□□□□ -0.25
PSMD6-211ENST00000497315 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
PSMD6-211ENST00000497315 MIER1Q8N108 512 aa13.49□□□□□ -0.25
PSMD6-211ENST00000497315 PITPNM1O00562 1244 aa13.48□□□□□ -0.25
PSMD6-211ENST00000497315 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
PSMD6-211ENST00000497315 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
PSMD6-211ENST00000497315 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
PSMD6-211ENST00000497315 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
PSMD6-211ENST00000497315 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
PSMD6-211ENST00000497315 SPOCK2Q92563 424 aa13.3□□□□□ -0.28
PSMD6-211ENST00000497315 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
PSMD6-211ENST00000497315 ZBTB47Q9UFB7 747 aaPredicted RBP13.29□□□□□ -0.28
PSMD6-211ENST00000497315 CHRDL2Q6WN34 429 aa13.22□□□□□ -0.29
PSMD6-211ENST00000497315 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
PSMD6-211ENST00000497315 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
PSMD6-211ENST00000497315 FXR2P51116 673 aaKnown RBP eCLIP13.15□□□□□ -0.3
PSMD6-211ENST00000497315 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
PSMD6-211ENST00000497315 PKD2Q13563 968 aa13.11□□□□□ -0.31
PSMD6-211ENST00000497315 PIP4P2Q8N4L2 257 aa13.11□□□□□ -0.31
PSMD6-211ENST00000497315 CIZ1Q9ULV3 898 aaPredicted RBP13.1□□□□□ -0.31
PSMD6-211ENST00000497315 NPM1P06748 294 aaKnown RBP eCLIP13.08□□□□□ -0.32
PSMD6-211ENST00000497315 NUBP1P53384 320 aa13.08□□□□□ -0.32
PSMD6-211ENST00000497315 FARP1Q9Y4F1 1045 aaPredicted RBP13.06□□□□□ -0.32
PSMD6-211ENST00000497315 ECM2O94769 699 aaPredicted RBP13.02□□□□□ -0.33
PSMD6-211ENST00000497315 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
PSMD6-211ENST00000497315 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
PSMD6-211ENST00000497315 FAM212AQ96EL1 285 aa13□□□□□ -0.33
PSMD6-211ENST00000497315 GSE1Q14687 1217 aa12.99□□□□□ -0.33
PSMD6-211ENST00000497315 DCAF8L2P0C7V8 631 aa12.95□□□□□ -0.34
PSMD6-211ENST00000497315 TSPYL2Q9H2G4 693 aaPredicted RBP12.91□□□□□ -0.34
PSMD6-211ENST00000497315 TRIM41Q8WV44 630 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms