RNA–Protein interactions for RNA: ENST00000497120.1

ZCCHC11-216, Transcript of Terminal uridylyltransferase 4, humanhuman

TSL 5

Gene ZCCHC11, Length 943 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC11-216ENST00000497120 AEBP2Q6ZN18 517 aaPredicted RBP28.01■■■□□ 2.07
ZCCHC11-216ENST00000497120 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.82
ZCCHC11-216ENST00000497120 SENP3Q9H4L4 574 aaPredicted RBP24■■□□□ 1.43
ZCCHC11-216ENST00000497120 PHF23Q9BUL5 403 aaPredicted RBP23.58■■□□□ 1.37
ZCCHC11-216ENST00000497120 FOXD1Q16676 465 aa22.34■■□□□ 1.17
ZCCHC11-216ENST00000497120 MSH5O43196 834 aa21.09■□□□□ 0.97
ZCCHC11-216ENST00000497120 POTEDQ86YR6 584 aa21■□□□□ 0.95
ZCCHC11-216ENST00000497120 PLPPR3Q6T4P5 718 aa20.95■□□□□ 0.94
ZCCHC11-216ENST00000497120 PIAS4Q8N2W9 510 aaPredicted RBP20.78■□□□□ 0.92
ZCCHC11-216ENST00000497120 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
ZCCHC11-216ENST00000497120 ADRA2BP18089 450 aa20.51■□□□□ 0.87
ZCCHC11-216ENST00000497120 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
ZCCHC11-216ENST00000497120 MAPK8IP2Q13387 824 aaPredicted RBP18.9■□□□□ 0.62
ZCCHC11-216ENST00000497120 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
ZCCHC11-216ENST00000497120 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
ZCCHC11-216ENST00000497120 HOXD11P31277 338 aaPredicted RBP18.22■□□□□ 0.51
ZCCHC11-216ENST00000497120 CACNB1Q02641 598 aaPredicted RBP18.15■□□□□ 0.5
ZCCHC11-216ENST00000497120 CNKSR2Q8WXI2 1034 aa18.06■□□□□ 0.48
ZCCHC11-216ENST00000497120 DCAF8L1A6NGE4 600 aa18.01■□□□□ 0.47
ZCCHC11-216ENST00000497120 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
ZCCHC11-216ENST00000497120 RNF39Q9H2S5 420 aa17.96■□□□□ 0.47
ZCCHC11-216ENST00000497120 DNAJC5BQ9UF47 199 aa17.79■□□□□ 0.44
ZCCHC11-216ENST00000497120 C1QBPQ07021 282 aaKnown RBP17.7■□□□□ 0.42
ZCCHC11-216ENST00000497120 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
ZCCHC11-216ENST00000497120 KCNA4P22459 653 aa17.5■□□□□ 0.39
ZCCHC11-216ENST00000497120 NPM3O75607 178 aaKnown RBP17.34■□□□□ 0.37
ZCCHC11-216ENST00000497120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.21■□□□□ 0.35
ZCCHC11-216ENST00000497120 U3KPZ7 1027 aaPredicted RBP16.89■□□□□ 0.29
ZCCHC11-216ENST00000497120 DSG3P32926 999 aa16.69■□□□□ 0.26
ZCCHC11-216ENST00000497120 SLC4A1APQ9BWU0 796 aaKnown RBP16.68■□□□□ 0.26
ZCCHC11-216ENST00000497120 SPINK5Q9NQ38 1064 aaPredicted RBP16.66■□□□□ 0.26
ZCCHC11-216ENST00000497120 CAPN15O75808 1086 aa16.62■□□□□ 0.25
ZCCHC11-216ENST00000497120 SLC4A2P04920 1241 aa16.55■□□□□ 0.24
ZCCHC11-216ENST00000497120 APLP2Q06481 763 aa16.46■□□□□ 0.23
ZCCHC11-216ENST00000497120 POTEHQ6S545 545 aa16.39■□□□□ 0.21
ZCCHC11-216ENST00000497120 ZNF219Q9P2Y4 722 aaPredicted RBP16.38■□□□□ 0.21
ZCCHC11-216ENST00000497120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.37■□□□□ 0.21
ZCCHC11-216ENST00000497120 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
ZCCHC11-216ENST00000497120 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
ZCCHC11-216ENST00000497120 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
ZCCHC11-216ENST00000497120 ABCB7O75027 752 aa16.18■□□□□ 0.18
ZCCHC11-216ENST00000497120 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
ZCCHC11-216ENST00000497120 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
ZCCHC11-216ENST00000497120 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
ZCCHC11-216ENST00000497120 ZBTB22O15209 634 aa16.03■□□□□ 0.16
ZCCHC11-216ENST00000497120 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
ZCCHC11-216ENST00000497120 POLA2Q14181 598 aa15.81■□□□□ 0.12
ZCCHC11-216ENST00000497120 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
ZCCHC11-216ENST00000497120 CHRDL2Q6WN34 429 aa15.68■□□□□ 0.1
ZCCHC11-216ENST00000497120 ZBTB12Q9Y330 459 aaPredicted RBP15.6■□□□□ 0.09
ZCCHC11-216ENST00000497120 ATF5Q9Y2D1 282 aaPredicted RBP15.59■□□□□ 0.09
ZCCHC11-216ENST00000497120 ATXN8OSP0DMR3 200 aa15.57■□□□□ 0.08
ZCCHC11-216ENST00000497120 AKT1S1Q96B36 256 aa15.54■□□□□ 0.08
ZCCHC11-216ENST00000497120 REM2Q8IYK8 340 aaPredicted RBP15.34■□□□□ 0.05
ZCCHC11-216ENST00000497120 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
ZCCHC11-216ENST00000497120 SP7Q8TDD2 431 aaPredicted RBP15.26■□□□□ 0.03
ZCCHC11-216ENST00000497120 PIP4P2Q8N4L2 257 aa15.24■□□□□ 0.03
ZCCHC11-216ENST00000497120 PITPNM1O00562 1244 aa15.17■□□□□ 0.02
ZCCHC11-216ENST00000497120 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
ZCCHC11-216ENST00000497120 SPDYE2BA6NHP3 402 aa15.08■□□□□ 0
ZCCHC11-216ENST00000497120 SPDYE6P0CI01 402 aa15.08■□□□□ 0
ZCCHC11-216ENST00000497120 FBLN2P98095 1184 aa15.08■□□□□ 0
ZCCHC11-216ENST00000497120 SPDYE2Q495Y8 402 aa15.08■□□□□ 0
ZCCHC11-216ENST00000497120 HAX1O00165 279 aa14.96□□□□□ -0.01
ZCCHC11-216ENST00000497120 MKRN4PQ13434 485 aaPredicted RBP14.89□□□□□ -0.03
ZCCHC11-216ENST00000497120 SSUH2Q9Y2M2 353 aa14.86□□□□□ -0.03
ZCCHC11-216ENST00000497120 SPDYE1Q8NFV5 336 aaPredicted RBP14.85□□□□□ -0.03
ZCCHC11-216ENST00000497120 EVX2Q03828 476 aa14.78□□□□□ -0.04
ZCCHC11-216ENST00000497120 PRKAR2AP13861 404 aaKnown RBP14.75□□□□□ -0.05
ZCCHC11-216ENST00000497120 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
ZCCHC11-216ENST00000497120 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
ZCCHC11-216ENST00000497120 C19orf67A6NJJ6 358 aa14.68□□□□□ -0.06
ZCCHC11-216ENST00000497120 SPDYE4A6NLX3 237 aa14.55□□□□□ -0.08
ZCCHC11-216ENST00000497120 PABPN1Q86U42 306 aaKnown RBP eCLIP14.52□□□□□ -0.09
ZCCHC11-216ENST00000497120 PRR29P0C7W0 189 aa14.48□□□□□ -0.09
ZCCHC11-216ENST00000497120 GABBR2O75899 941 aa14.47□□□□□ -0.09
ZCCHC11-216ENST00000497120 CHADLQ6NUI6 762 aa14.47□□□□□ -0.09
ZCCHC11-216ENST00000497120 FKBP8Q14318 412 aa14.41□□□□□ -0.1
ZCCHC11-216ENST00000497120 CLCN6P51797 869 aa14.32□□□□□ -0.12
ZCCHC11-216ENST00000497120 FARP1Q9Y4F1 1045 aaPredicted RBP14.31□□□□□ -0.12
ZCCHC11-216ENST00000497120 CD44P16070 742 aaKnown RBP14.28□□□□□ -0.12
ZCCHC11-216ENST00000497120 LHX8Q68G74 356 aa14.27□□□□□ -0.13
ZCCHC11-216ENST00000497120 STAG3Q9UJ98 1225 aa14.19□□□□□ -0.14
ZCCHC11-216ENST00000497120 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
ZCCHC11-216ENST00000497120 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
ZCCHC11-216ENST00000497120 PROM2Q8N271 834 aa14.11□□□□□ -0.15
ZCCHC11-216ENST00000497120 CREBZFQ9NS37 354 aa14.11□□□□□ -0.15
ZCCHC11-216ENST00000497120 ZRANB1Q9UGI0 708 aa14.01□□□□□ -0.17
ZCCHC11-216ENST00000497120 DCBLD2Q96PD2 775 aa13.98□□□□□ -0.17
ZCCHC11-216ENST00000497120 FBXO3Q9UK99 471 aa13.95□□□□□ -0.18
ZCCHC11-216ENST00000497120 MIER1Q8N108 512 aa13.89□□□□□ -0.19
ZCCHC11-216ENST00000497120 GALR2O43603 387 aaPredicted RBP13.88□□□□□ -0.19
ZCCHC11-216ENST00000497120 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
ZCCHC11-216ENST00000497120 MNX1P50219 401 aaPredicted RBP13.88□□□□□ -0.19
ZCCHC11-216ENST00000497120 PAK3O75914 559 aaPredicted RBP13.87□□□□□ -0.19
ZCCHC11-216ENST00000497120 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
ZCCHC11-216ENST00000497120 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
ZCCHC11-216ENST00000497120 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
ZCCHC11-216ENST00000497120 VASPP50552 380 aaPredicted RBP13.72□□□□□ -0.21
ZCCHC11-216ENST00000497120 OTUD5Q96G74 571 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms