RNA–Protein interactions for RNA: ENST00000497093.1

CCDC172-203, Transcript of coiled-coil domain containing 172, humanhuman

TSL 2

Gene CCDC172, Length 494 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-203ENST00000497093 AEBP2Q6ZN18 517 aaPredicted RBP26.4■■□□□ 1.82
CCDC172-203ENST00000497093 CHIC1Q5VXU3 224 aa24.78■■□□□ 1.56
CCDC172-203ENST00000497093 SENP3Q9H4L4 574 aaPredicted RBP22.4■■□□□ 1.18
CCDC172-203ENST00000497093 PHF23Q9BUL5 403 aaPredicted RBP22.19■■□□□ 1.14
CCDC172-203ENST00000497093 FOXD1Q16676 465 aa21.01■□□□□ 0.95
CCDC172-203ENST00000497093 POTEDQ86YR6 584 aa19.81■□□□□ 0.76
CCDC172-203ENST00000497093 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
CCDC172-203ENST00000497093 MSH5O43196 834 aa19.62■□□□□ 0.73
CCDC172-203ENST00000497093 PPP6R1Q9UPN7 881 aa19.57■□□□□ 0.72
CCDC172-203ENST00000497093 PIAS4Q8N2W9 510 aaPredicted RBP19.54■□□□□ 0.72
CCDC172-203ENST00000497093 ADRA2BP18089 450 aa19.47■□□□□ 0.71
CCDC172-203ENST00000497093 MAPK8IP2Q13387 824 aaPredicted RBP17.99■□□□□ 0.47
CCDC172-203ENST00000497093 DMRT2Q9Y5R5 561 aa17.77■□□□□ 0.44
CCDC172-203ENST00000497093 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
CCDC172-203ENST00000497093 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
CCDC172-203ENST00000497093 DCAF8L1A6NGE4 600 aa17.11■□□□□ 0.33
CCDC172-203ENST00000497093 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
CCDC172-203ENST00000497093 HOXD11P31277 338 aaPredicted RBP17.03■□□□□ 0.32
CCDC172-203ENST00000497093 CNKSR2Q8WXI2 1034 aa16.95■□□□□ 0.3
CCDC172-203ENST00000497093 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
CCDC172-203ENST00000497093 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
CCDC172-203ENST00000497093 C1QBPQ07021 282 aaKnown RBP16.48■□□□□ 0.23
CCDC172-203ENST00000497093 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
CCDC172-203ENST00000497093 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
CCDC172-203ENST00000497093 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
CCDC172-203ENST00000497093 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.25■□□□□ 0.19
CCDC172-203ENST00000497093 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
CCDC172-203ENST00000497093 KCNA4P22459 653 aa15.86■□□□□ 0.13
CCDC172-203ENST00000497093 SPINK5Q9NQ38 1064 aaPredicted RBP15.79■□□□□ 0.12
CCDC172-203ENST00000497093 CAPN15O75808 1086 aa15.71■□□□□ 0.11
CCDC172-203ENST00000497093 SLC4A2P04920 1241 aa15.67■□□□□ 0.1
CCDC172-203ENST00000497093 DSG3P32926 999 aa15.67■□□□□ 0.1
CCDC172-203ENST00000497093 TRHP20396 242 aaPredicted RBP15.45■□□□□ 0.06
CCDC172-203ENST00000497093 POTEHQ6S545 545 aa15.42■□□□□ 0.06
CCDC172-203ENST00000497093 ABCB7O75027 752 aa15.39■□□□□ 0.05
CCDC172-203ENST00000497093 ZNF219Q9P2Y4 722 aaPredicted RBP15.28■□□□□ 0.04
CCDC172-203ENST00000497093 APLP2Q06481 763 aa15.27■□□□□ 0.04
CCDC172-203ENST00000497093 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
CCDC172-203ENST00000497093 HNRNPUL2Q1KMD3 747 aaKnown RBP15.25■□□□□ 0.03
CCDC172-203ENST00000497093 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
CCDC172-203ENST00000497093 MYCNP04198 464 aaPredicted RBP15.02■□□□□ -0
CCDC172-203ENST00000497093 POLA2Q14181 598 aa14.98□□□□□ -0.01
CCDC172-203ENST00000497093 SLC4A1APQ9BWU0 796 aaKnown RBP14.88□□□□□ -0.03
CCDC172-203ENST00000497093 ATF5Q9Y2D1 282 aaPredicted RBP14.85□□□□□ -0.03
CCDC172-203ENST00000497093 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
CCDC172-203ENST00000497093 FOXD4L1Q9NU39 408 aa14.78□□□□□ -0.04
CCDC172-203ENST00000497093 CHRDL2Q6WN34 429 aa14.68□□□□□ -0.06
CCDC172-203ENST00000497093 ZBTB22O15209 634 aa14.61□□□□□ -0.07
CCDC172-203ENST00000497093 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
CCDC172-203ENST00000497093 ZBTB12Q9Y330 459 aaPredicted RBP14.5□□□□□ -0.09
CCDC172-203ENST00000497093 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
CCDC172-203ENST00000497093 REM2Q8IYK8 340 aaPredicted RBP14.44□□□□□ -0.1
CCDC172-203ENST00000497093 PIP4P2Q8N4L2 257 aa14.32□□□□□ -0.12
CCDC172-203ENST00000497093 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
CCDC172-203ENST00000497093 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
CCDC172-203ENST00000497093 SP7Q8TDD2 431 aaPredicted RBP14.23□□□□□ -0.13
CCDC172-203ENST00000497093 FXR2P51116 673 aaKnown RBP eCLIP14.19□□□□□ -0.14
CCDC172-203ENST00000497093 HAX1O00165 279 aa14.13□□□□□ -0.15
CCDC172-203ENST00000497093 FBLN2P98095 1184 aa14.12□□□□□ -0.15
CCDC172-203ENST00000497093 MKRN4PQ13434 485 aaPredicted RBP14.11□□□□□ -0.15
CCDC172-203ENST00000497093 SPDYE2BA6NHP3 402 aa14.1□□□□□ -0.15
CCDC172-203ENST00000497093 SPDYE6P0CI01 402 aa14.1□□□□□ -0.15
CCDC172-203ENST00000497093 SPDYE2Q495Y8 402 aa14.1□□□□□ -0.15
CCDC172-203ENST00000497093 EVX2Q03828 476 aa14.03□□□□□ -0.16
CCDC172-203ENST00000497093 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
CCDC172-203ENST00000497093 ZNF692Q9BU19 519 aaPredicted RBP13.97□□□□□ -0.17
CCDC172-203ENST00000497093 PRKAR2AP13861 404 aaKnown RBP13.92□□□□□ -0.18
CCDC172-203ENST00000497093 SPDYE1Q8NFV5 336 aaPredicted RBP13.91□□□□□ -0.18
CCDC172-203ENST00000497093 SSUH2Q9Y2M2 353 aa13.91□□□□□ -0.18
CCDC172-203ENST00000497093 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
CCDC172-203ENST00000497093 PABPN1Q86U42 306 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC172-203ENST00000497093 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
CCDC172-203ENST00000497093 C19orf67A6NJJ6 358 aa13.73□□□□□ -0.21
CCDC172-203ENST00000497093 PRR29P0C7W0 189 aa13.69□□□□□ -0.22
CCDC172-203ENST00000497093 GABBR2O75899 941 aa13.62□□□□□ -0.23
CCDC172-203ENST00000497093 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
CCDC172-203ENST00000497093 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
CCDC172-203ENST00000497093 CD44P16070 742 aaKnown RBP13.44□□□□□ -0.26
CCDC172-203ENST00000497093 LHX8Q68G74 356 aa13.38□□□□□ -0.27
CCDC172-203ENST00000497093 POTEIP0CG38 1075 aa13.37□□□□□ -0.27
CCDC172-203ENST00000497093 CREBZFQ9NS37 354 aa13.33□□□□□ -0.28
CCDC172-203ENST00000497093 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
CCDC172-203ENST00000497093 ZRANB1Q9UGI0 708 aa13.25□□□□□ -0.29
CCDC172-203ENST00000497093 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
CCDC172-203ENST00000497093 ZNF579Q8NAF0 562 aaKnown RBP13.19□□□□□ -0.3
CCDC172-203ENST00000497093 CLCN6P51797 869 aa13.17□□□□□ -0.3
CCDC172-203ENST00000497093 DCBLD2Q96PD2 775 aa13.17□□□□□ -0.3
CCDC172-203ENST00000497093 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
CCDC172-203ENST00000497093 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
CCDC172-203ENST00000497093 PHF12Q96QT6 1004 aa13.07□□□□□ -0.32
CCDC172-203ENST00000497093 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
CCDC172-203ENST00000497093 PAK3O75914 559 aaPredicted RBP13□□□□□ -0.33
CCDC172-203ENST00000497093 NPM1P06748 294 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC172-203ENST00000497093 POTEB2H3BUK9 544 aa12.95□□□□□ -0.34
CCDC172-203ENST00000497093 PELP1Q8IZL8 1130 aaKnown RBP12.93□□□□□ -0.34
CCDC172-203ENST00000497093 PROM2Q8N271 834 aa12.9□□□□□ -0.34
CCDC172-203ENST00000497093 OTUD5Q96G74 571 aa12.89□□□□□ -0.35
CCDC172-203ENST00000497093 MS4A3Q96HJ5 214 aa12.87□□□□□ -0.35
CCDC172-203ENST00000497093 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
CCDC172-203ENST00000497093 ATMINO43313 823 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms