RNA–Protein interactions for RNA: ENST00000497088.5

SLTM-210, Transcript of SAFB like transcription modulator, humanhuman

TSL 2

Gene SLTM, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-210ENST00000497088 AEBP2Q6ZN18 517 aaPredicted RBP24.43■■□□□ 1.5
SLTM-210ENST00000497088 CHIC1Q5VXU3 224 aa23.07■■□□□ 1.28
SLTM-210ENST00000497088 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
SLTM-210ENST00000497088 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
SLTM-210ENST00000497088 FOXD1Q16676 465 aa19.38■□□□□ 0.69
SLTM-210ENST00000497088 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
SLTM-210ENST00000497088 PPP6R1Q9UPN7 881 aa18.14■□□□□ 0.49
SLTM-210ENST00000497088 MSH5O43196 834 aa18.03■□□□□ 0.48
SLTM-210ENST00000497088 ADRA2BP18089 450 aa18.03■□□□□ 0.48
SLTM-210ENST00000497088 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
SLTM-210ENST00000497088 POTEDQ86YR6 584 aa17.76■□□□□ 0.43
SLTM-210ENST00000497088 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
SLTM-210ENST00000497088 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
SLTM-210ENST00000497088 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
SLTM-210ENST00000497088 PPP4R3CPQ6ZMV5 832 aa16.12■□□□□ 0.17
SLTM-210ENST00000497088 HOXD11P31277 338 aaPredicted RBP15.85■□□□□ 0.13
SLTM-210ENST00000497088 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
SLTM-210ENST00000497088 RNF216Q9NWF9 866 aaPredicted RBP15.67■□□□□ 0.1
SLTM-210ENST00000497088 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
SLTM-210ENST00000497088 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
SLTM-210ENST00000497088 RNF39Q9H2S5 420 aa15.47■□□□□ 0.07
SLTM-210ENST00000497088 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
SLTM-210ENST00000497088 NPM3O75607 178 aaKnown RBP15.29■□□□□ 0.04
SLTM-210ENST00000497088 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
SLTM-210ENST00000497088 C1QBPQ07021 282 aaKnown RBP15.17■□□□□ 0.02
SLTM-210ENST00000497088 KCNA4P22459 653 aa14.99□□□□□ -0.01
SLTM-210ENST00000497088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.99□□□□□ -0.012e-6■■■■□ 22
SLTM-210ENST00000497088 U3KPZ7 1027 aaPredicted RBP14.79□□□□□ -0.04
SLTM-210ENST00000497088 SLC4A2P04920 1241 aa14.67□□□□□ -0.06
SLTM-210ENST00000497088 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
SLTM-210ENST00000497088 DSG3P32926 999 aa14.47□□□□□ -0.09
SLTM-210ENST00000497088 CAPN15O75808 1086 aa14.46□□□□□ -0.09
SLTM-210ENST00000497088 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
SLTM-210ENST00000497088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.19□□□□□ -0.14
SLTM-210ENST00000497088 HNRNPUL2Q1KMD3 747 aaKnown RBP14.19□□□□□ -0.14
SLTM-210ENST00000497088 ABCB7O75027 752 aa14.18□□□□□ -0.14
SLTM-210ENST00000497088 ZNF219Q9P2Y4 722 aaPredicted RBP14.18□□□□□ -0.14
SLTM-210ENST00000497088 APLP2Q06481 763 aa14.17□□□□□ -0.14
SLTM-210ENST00000497088 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
SLTM-210ENST00000497088 MYCNP04198 464 aaPredicted RBP14.08□□□□□ -0.16
SLTM-210ENST00000497088 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
SLTM-210ENST00000497088 FOXD4L1Q9NU39 408 aa13.93□□□□□ -0.18
SLTM-210ENST00000497088 ATF5Q9Y2D1 282 aaPredicted RBP13.89□□□□□ -0.19
SLTM-210ENST00000497088 POTEHQ6S545 545 aa13.87□□□□□ -0.19
SLTM-210ENST00000497088 ZBTB22O15209 634 aa13.86□□□□□ -0.19
SLTM-210ENST00000497088 POLA2Q14181 598 aa13.86□□□□□ -0.19
SLTM-210ENST00000497088 RBM42Q9BTD8 480 aaKnown RBP13.69□□□□□ -0.22
SLTM-210ENST00000497088 ZBTB12Q9Y330 459 aaPredicted RBP13.5□□□□□ -0.25
SLTM-210ENST00000497088 ATXN8OSP0DMR3 200 aa13.49□□□□□ -0.25
SLTM-210ENST00000497088 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
SLTM-210ENST00000497088 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
SLTM-210ENST00000497088 AKT1S1Q96B36 256 aa13.42□□□□□ -0.26
SLTM-210ENST00000497088 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
SLTM-210ENST00000497088 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
SLTM-210ENST00000497088 CSRNP3Q8WYN3 585 aa13.33□□□□□ -0.28
SLTM-210ENST00000497088 MKRN4PQ13434 485 aaPredicted RBP13.24□□□□□ -0.29
SLTM-210ENST00000497088 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
SLTM-210ENST00000497088 PIP4P2Q8N4L2 257 aa13.19□□□□□ -0.3
SLTM-210ENST00000497088 FBLN2P98095 1184 aa13.15□□□□□ -0.3
SLTM-210ENST00000497088 SPDYE2BA6NHP3 402 aa13.14□□□□□ -0.31
SLTM-210ENST00000497088 SPDYE6P0CI01 402 aa13.14□□□□□ -0.31
SLTM-210ENST00000497088 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
SLTM-210ENST00000497088 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.316e-6■■■■□ 25.8
SLTM-210ENST00000497088 SSUH2Q9Y2M2 353 aa13.03□□□□□ -0.32
SLTM-210ENST00000497088 SP7Q8TDD2 431 aaPredicted RBP12.98□□□□□ -0.33
SLTM-210ENST00000497088 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
SLTM-210ENST00000497088 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
SLTM-210ENST00000497088 EVX2Q03828 476 aa12.87□□□□□ -0.35
SLTM-210ENST00000497088 HAX1O00165 279 aa12.86□□□□□ -0.35
SLTM-210ENST00000497088 CLEC11AQ9Y240 323 aa12.86□□□□□ -0.35
SLTM-210ENST00000497088 PRKAR2AP13861 404 aaKnown RBP12.82□□□□□ -0.36
SLTM-210ENST00000497088 PABPN1Q86U42 306 aaKnown RBP eCLIP12.8□□□□□ -0.36
SLTM-210ENST00000497088 CHADLQ6NUI6 762 aa12.71□□□□□ -0.37
SLTM-210ENST00000497088 C19orf67A6NJJ6 358 aa12.69□□□□□ -0.38
SLTM-210ENST00000497088 PRR29P0C7W0 189 aa12.64□□□□□ -0.39
SLTM-210ENST00000497088 GABBR2O75899 941 aa12.49□□□□□ -0.41
SLTM-210ENST00000497088 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
SLTM-210ENST00000497088 SPDYE4A6NLX3 237 aa12.48□□□□□ -0.41
SLTM-210ENST00000497088 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
SLTM-210ENST00000497088 CD44P16070 742 aaKnown RBP12.4□□□□□ -0.42
SLTM-210ENST00000497088 STAG3Q9UJ98 1225 aa12.36□□□□□ -0.43
SLTM-210ENST00000497088 POTEIP0CG38 1075 aa12.31□□□□□ -0.44
SLTM-210ENST00000497088 PROM2Q8N271 834 aa12.29□□□□□ -0.44
SLTM-210ENST00000497088 MNX1P50219 401 aaPredicted RBP12.26□□□□□ -0.45
SLTM-210ENST00000497088 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
SLTM-210ENST00000497088 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
SLTM-210ENST00000497088 CLCN6P51797 869 aa12.17□□□□□ -0.46
SLTM-210ENST00000497088 LHX8Q68G74 356 aa12.16□□□□□ -0.46
SLTM-210ENST00000497088 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
SLTM-210ENST00000497088 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
SLTM-210ENST00000497088 NPM1P06748 294 aaKnown RBP eCLIP12.06□□□□□ -0.48
SLTM-210ENST00000497088 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
SLTM-210ENST00000497088 FKBP8Q14318 412 aa12.04□□□□□ -0.48
SLTM-210ENST00000497088 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
SLTM-210ENST00000497088 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
SLTM-210ENST00000497088 MS4A3Q96HJ5 214 aa11.94□□□□□ -0.5
SLTM-210ENST00000497088 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
SLTM-210ENST00000497088 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
SLTM-210ENST00000497088 TSPYL2Q9H2G4 693 aaPredicted RBP11.9□□□□□ -0.5
SLTM-210ENST00000497088 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms