RNA–Protein interactions for RNA: ENST00000496838.1

TSC22D1-210, Transcript of TSC22 domain family member 1, humanhuman

TSL 1 (best)

Gene TSC22D1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-210ENST00000496838 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
TSC22D1-210ENST00000496838 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
TSC22D1-210ENST00000496838 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
TSC22D1-210ENST00000496838 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.58
TSC22D1-210ENST00000496838 FOXD1Q16676 465 aa23.5■■□□□ 1.35
TSC22D1-210ENST00000496838 PLPPR3Q6T4P5 718 aa22.61■■□□□ 1.21
TSC22D1-210ENST00000496838 MSH5O43196 834 aa22.05■■□□□ 1.12
TSC22D1-210ENST00000496838 PIAS4Q8N2W9 510 aaPredicted RBP22.02■■□□□ 1.12
TSC22D1-210ENST00000496838 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
TSC22D1-210ENST00000496838 ADRA2BP18089 450 aa21.95■■□□□ 1.1
TSC22D1-210ENST00000496838 POTEDQ86YR6 584 aa21.32■■□□□ 1
TSC22D1-210ENST00000496838 SCAF1Q9H7N4 1312 aaKnown RBP20.23■□□□□ 0.83
TSC22D1-210ENST00000496838 MAPK8IP2Q13387 824 aaPredicted RBP20.13■□□□□ 0.81
TSC22D1-210ENST00000496838 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
TSC22D1-210ENST00000496838 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
TSC22D1-210ENST00000496838 CNKSR2Q8WXI2 1034 aa19.43■□□□□ 0.7
TSC22D1-210ENST00000496838 HOXD11P31277 338 aaPredicted RBP19.34■□□□□ 0.69
TSC22D1-210ENST00000496838 DCAF8L1A6NGE4 600 aa19.24■□□□□ 0.67
TSC22D1-210ENST00000496838 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
TSC22D1-210ENST00000496838 NCBP3Q53F19 620 aaKnown RBP19.13■□□□□ 0.65
TSC22D1-210ENST00000496838 CACNB1Q02641 598 aaPredicted RBP18.86■□□□□ 0.61
TSC22D1-210ENST00000496838 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
TSC22D1-210ENST00000496838 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
TSC22D1-210ENST00000496838 DNAJC5BQ9UF47 199 aa18.71■□□□□ 0.59
TSC22D1-210ENST00000496838 C1QBPQ07021 282 aaKnown RBP18.55■□□□□ 0.56
TSC22D1-210ENST00000496838 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.46■□□□□ 0.55
TSC22D1-210ENST00000496838 KCNA4P22459 653 aa18.45■□□□□ 0.54
TSC22D1-210ENST00000496838 U3KPZ7 1027 aaPredicted RBP18.02■□□□□ 0.48
TSC22D1-210ENST00000496838 SLC4A2P04920 1241 aa17.88■□□□□ 0.45
TSC22D1-210ENST00000496838 CAPN15O75808 1086 aa17.75■□□□□ 0.43
TSC22D1-210ENST00000496838 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
TSC22D1-210ENST00000496838 APLP2Q06481 763 aa17.66■□□□□ 0.42
TSC22D1-210ENST00000496838 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.65■□□□□ 0.42
TSC22D1-210ENST00000496838 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
TSC22D1-210ENST00000496838 DSG3P32926 999 aa17.6■□□□□ 0.41
TSC22D1-210ENST00000496838 SAMD1Q6SPF0 538 aaPredicted RBP17.53■□□□□ 0.4
TSC22D1-210ENST00000496838 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
TSC22D1-210ENST00000496838 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
TSC22D1-210ENST00000496838 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
TSC22D1-210ENST00000496838 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
TSC22D1-210ENST00000496838 ABCB7O75027 752 aa17.3■□□□□ 0.36
TSC22D1-210ENST00000496838 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
TSC22D1-210ENST00000496838 POLA2Q14181 598 aa17.02■□□□□ 0.32
TSC22D1-210ENST00000496838 ZBTB22O15209 634 aa16.92■□□□□ 0.3
TSC22D1-210ENST00000496838 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
TSC22D1-210ENST00000496838 RBM42Q9BTD8 480 aaKnown RBP16.87■□□□□ 0.29
TSC22D1-210ENST00000496838 POTEHQ6S545 545 aa16.75■□□□□ 0.27
TSC22D1-210ENST00000496838 ZBTB12Q9Y330 459 aaPredicted RBP16.75■□□□□ 0.27
TSC22D1-210ENST00000496838 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
TSC22D1-210ENST00000496838 AKT1S1Q96B36 256 aa16.47■□□□□ 0.23
TSC22D1-210ENST00000496838 OSCARQ8IYS5 282 aa16.44■□□□□ 0.22
TSC22D1-210ENST00000496838 CHRDL2Q6WN34 429 aa16.42■□□□□ 0.22
TSC22D1-210ENST00000496838 FBLN2P98095 1184 aa16.36■□□□□ 0.21
TSC22D1-210ENST00000496838 REM2Q8IYK8 340 aaPredicted RBP16.28■□□□□ 0.2
TSC22D1-210ENST00000496838 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
TSC22D1-210ENST00000496838 SPDYE2BA6NHP3 402 aa16.21■□□□□ 0.19
TSC22D1-210ENST00000496838 SPDYE6P0CI01 402 aa16.21■□□□□ 0.19
TSC22D1-210ENST00000496838 SPDYE2Q495Y8 402 aa16.21■□□□□ 0.19
TSC22D1-210ENST00000496838 MKRN4PQ13434 485 aaPredicted RBP16.14■□□□□ 0.17
TSC22D1-210ENST00000496838 PITPNM1O00562 1244 aa16.08■□□□□ 0.16
TSC22D1-210ENST00000496838 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
TSC22D1-210ENST00000496838 ZNF692Q9BU19 519 aaPredicted RBP16.02■□□□□ 0.16
TSC22D1-210ENST00000496838 PIP4P2Q8N4L2 257 aa16.01■□□□□ 0.15
TSC22D1-210ENST00000496838 SSUH2Q9Y2M2 353 aa15.96■□□□□ 0.15
TSC22D1-210ENST00000496838 FXR2P51116 673 aaKnown RBP eCLIP15.95■□□□□ 0.14
TSC22D1-210ENST00000496838 SPDYE1Q8NFV5 336 aaPredicted RBP15.92■□□□□ 0.14
TSC22D1-210ENST00000496838 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
TSC22D1-210ENST00000496838 PABPN1Q86U42 306 aaKnown RBP eCLIP15.76■□□□□ 0.11
TSC22D1-210ENST00000496838 HAX1O00165 279 aa15.75■□□□□ 0.11
TSC22D1-210ENST00000496838 SP7Q8TDD2 431 aaPredicted RBP15.75■□□□□ 0.11
TSC22D1-210ENST00000496838 PRKAR2AP13861 404 aaKnown RBP15.7■□□□□ 0.1
TSC22D1-210ENST00000496838 PRR29P0C7W0 189 aa15.63■□□□□ 0.09
TSC22D1-210ENST00000496838 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
TSC22D1-210ENST00000496838 SPDYE4A6NLX3 237 aa15.48■□□□□ 0.07
TSC22D1-210ENST00000496838 EVX2Q03828 476 aa15.47■□□□□ 0.07
TSC22D1-210ENST00000496838 C19orf67A6NJJ6 358 aa15.43■□□□□ 0.06
TSC22D1-210ENST00000496838 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
TSC22D1-210ENST00000496838 FARP1Q9Y4F1 1045 aaPredicted RBP15.32■□□□□ 0.04
TSC22D1-210ENST00000496838 CD44P16070 742 aaKnown RBP15.22■□□□□ 0.03
TSC22D1-210ENST00000496838 CREBZFQ9NS37 354 aa15.2■□□□□ 0.02
TSC22D1-210ENST00000496838 GABBR2O75899 941 aa15.19■□□□□ 0.02
TSC22D1-210ENST00000496838 CLCN6P51797 869 aa15.09■□□□□ 0.01
TSC22D1-210ENST00000496838 PROM2Q8N271 834 aa15.08■□□□□ 0
TSC22D1-210ENST00000496838 NPM1P06748 294 aaKnown RBP eCLIP15.01□□□□□ -0.01
TSC22D1-210ENST00000496838 ZRANB1Q9UGI0 708 aa15.01□□□□□ -0.01
TSC22D1-210ENST00000496838 ZNF579Q8NAF0 562 aaKnown RBP14.98□□□□□ -0.01
TSC22D1-210ENST00000496838 PAK3O75914 559 aaPredicted RBP14.97□□□□□ -0.01
TSC22D1-210ENST00000496838 MNX1P50219 401 aaPredicted RBP14.93□□□□□ -0.02
TSC22D1-210ENST00000496838 DCBLD2Q96PD2 775 aa14.85□□□□□ -0.03
TSC22D1-210ENST00000496838 PLEKHG5O94827 1062 aa14.84□□□□□ -0.03
TSC22D1-210ENST00000496838 POTEIP0CG38 1075 aa14.82□□□□□ -0.04
TSC22D1-210ENST00000496838 MIER1Q8N108 512 aa14.78□□□□□ -0.04
TSC22D1-210ENST00000496838 FKBP8Q14318 412 aa14.77□□□□□ -0.05
TSC22D1-210ENST00000496838 LHX8Q68G74 356 aa14.77□□□□□ -0.05
TSC22D1-210ENST00000496838 GALR2O43603 387 aaPredicted RBP14.76□□□□□ -0.05
TSC22D1-210ENST00000496838 PHF12Q96QT6 1004 aa14.76□□□□□ -0.05
TSC22D1-210ENST00000496838 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
TSC22D1-210ENST00000496838 TSPYL2Q9H2G4 693 aaPredicted RBP14.68□□□□□ -0.06
TSC22D1-210ENST00000496838 ZBTB47Q9UFB7 747 aaPredicted RBP14.62□□□□□ -0.07
TSC22D1-210ENST00000496838 CCDC61Q9Y6R9 512 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms