RNA–Protein interactions for RNA: ENST00000496510.6

PCNX2-215, Transcript of pecanex 2, humanhuman

TSL 4

Gene PCNX2, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-215ENST00000496510 AEBP2Q6ZN18 517 aaPredicted RBP23.31■■□□□ 1.32
PCNX2-215ENST00000496510 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
PCNX2-215ENST00000496510 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
PCNX2-215ENST00000496510 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
PCNX2-215ENST00000496510 PLPPR3Q6T4P5 718 aa19.12■□□□□ 0.65
PCNX2-215ENST00000496510 FOXD1Q16676 465 aa18.22■□□□□ 0.51
PCNX2-215ENST00000496510 ADRA2BP18089 450 aa18.05■□□□□ 0.48
PCNX2-215ENST00000496510 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
PCNX2-215ENST00000496510 PIAS4Q8N2W9 510 aaPredicted RBP17.37■□□□□ 0.37
PCNX2-215ENST00000496510 KCNA4P22459 653 aa17.24■□□□□ 0.35
PCNX2-215ENST00000496510 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
PCNX2-215ENST00000496510 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
PCNX2-215ENST00000496510 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
PCNX2-215ENST00000496510 MSH5O43196 834 aa16.52■□□□□ 0.24
PCNX2-215ENST00000496510 SLC4A1APQ9BWU0 796 aaKnown RBP16.51■□□□□ 0.23
PCNX2-215ENST00000496510 NPM3O75607 178 aaKnown RBP16.44■□□□□ 0.22
PCNX2-215ENST00000496510 SCAF1Q9H7N4 1312 aaKnown RBP16.41■□□□□ 0.22
PCNX2-215ENST00000496510 CNKSR2Q8WXI2 1034 aa16.31■□□□□ 0.2
PCNX2-215ENST00000496510 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
PCNX2-215ENST00000496510 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
PCNX2-215ENST00000496510 ZBTB22O15209 634 aa15.85■□□□□ 0.13
PCNX2-215ENST00000496510 RNF216Q9NWF9 866 aaPredicted RBP15.83■□□□□ 0.12
PCNX2-215ENST00000496510 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
PCNX2-215ENST00000496510 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
PCNX2-215ENST00000496510 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
PCNX2-215ENST00000496510 DNAJC5BQ9UF47 199 aa15.59■□□□□ 0.09
PCNX2-215ENST00000496510 SLC4A2P04920 1241 aa15.37■□□□□ 0.05
PCNX2-215ENST00000496510 DCAF8L1A6NGE4 600 aa15.29■□□□□ 0.04
PCNX2-215ENST00000496510 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
PCNX2-215ENST00000496510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -0
PCNX2-215ENST00000496510 ATXN8OSP0DMR3 200 aa14.94□□□□□ -0.02
PCNX2-215ENST00000496510 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
PCNX2-215ENST00000496510 U3KPZ7 1027 aaPredicted RBP14.78□□□□□ -0.04
PCNX2-215ENST00000496510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
PCNX2-215ENST00000496510 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
PCNX2-215ENST00000496510 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
PCNX2-215ENST00000496510 FKBP8Q14318 412 aa14.69□□□□□ -0.06
PCNX2-215ENST00000496510 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
PCNX2-215ENST00000496510 APLP2Q06481 763 aa14.43□□□□□ -0.1
PCNX2-215ENST00000496510 RTN4Q9NQC3 1192 aaKnown RBP14.32□□□□□ -0.12
PCNX2-215ENST00000496510 TRHP20396 242 aaPredicted RBP14.31□□□□□ -0.12
PCNX2-215ENST00000496510 SPINK5Q9NQ38 1064 aaPredicted RBP14.28□□□□□ -0.12
PCNX2-215ENST00000496510 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
PCNX2-215ENST00000496510 CAPN15O75808 1086 aa14.23□□□□□ -0.13
PCNX2-215ENST00000496510 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
PCNX2-215ENST00000496510 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
PCNX2-215ENST00000496510 POLA2Q14181 598 aa14.14□□□□□ -0.15
PCNX2-215ENST00000496510 MKRN4PQ13434 485 aaPredicted RBP14.12□□□□□ -0.15
PCNX2-215ENST00000496510 SPDYE4A6NLX3 237 aa14.1□□□□□ -0.15
PCNX2-215ENST00000496510 FBLN2P98095 1184 aa14.09□□□□□ -0.15
PCNX2-215ENST00000496510 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
PCNX2-215ENST00000496510 ABCB7O75027 752 aa14.05□□□□□ -0.16
PCNX2-215ENST00000496510 FBXO3Q9UK99 471 aa13.91□□□□□ -0.18
PCNX2-215ENST00000496510 ZBTB12Q9Y330 459 aaPredicted RBP13.84□□□□□ -0.19
PCNX2-215ENST00000496510 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
PCNX2-215ENST00000496510 PROM2Q8N271 834 aa13.77□□□□□ -0.21
PCNX2-215ENST00000496510 VASPP50552 380 aaPredicted RBP13.75□□□□□ -0.21
PCNX2-215ENST00000496510 DSG3P32926 999 aa13.74□□□□□ -0.21
PCNX2-215ENST00000496510 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
PCNX2-215ENST00000496510 ZNF692Q9BU19 519 aaPredicted RBP13.65□□□□□ -0.22
PCNX2-215ENST00000496510 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
PCNX2-215ENST00000496510 CACNB1Q02641 598 aaPredicted RBP13.57□□□□□ -0.24
PCNX2-215ENST00000496510 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
PCNX2-215ENST00000496510 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
PCNX2-215ENST00000496510 SPDYE2Q495Y8 402 aa13.52□□□□□ -0.25
PCNX2-215ENST00000496510 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCNX2-215ENST00000496510 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
PCNX2-215ENST00000496510 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
PCNX2-215ENST00000496510 SSUH2Q9Y2M2 353 aa13.46□□□□□ -0.25
PCNX2-215ENST00000496510 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
PCNX2-215ENST00000496510 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
PCNX2-215ENST00000496510 MIER1Q8N108 512 aa13.37□□□□□ -0.27
PCNX2-215ENST00000496510 SPOCK2Q92563 424 aa13.35□□□□□ -0.27
PCNX2-215ENST00000496510 PKD2Q13563 968 aa13.34□□□□□ -0.27
PCNX2-215ENST00000496510 ECM2O94769 699 aaPredicted RBP13.23□□□□□ -0.29
PCNX2-215ENST00000496510 PLEKHG5O94827 1062 aa13.2□□□□□ -0.3
PCNX2-215ENST00000496510 PLCB2Q00722 1185 aa13.19□□□□□ -0.3
PCNX2-215ENST00000496510 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
PCNX2-215ENST00000496510 HAP1P54257 671 aaPredicted RBP13.13□□□□□ -0.31
PCNX2-215ENST00000496510 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
PCNX2-215ENST00000496510 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
PCNX2-215ENST00000496510 RGL2O15211 777 aa13.07□□□□□ -0.32
PCNX2-215ENST00000496510 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
PCNX2-215ENST00000496510 SPDYE1Q8NFV5 336 aaPredicted RBP13.03□□□□□ -0.32
PCNX2-215ENST00000496510 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
PCNX2-215ENST00000496510 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
PCNX2-215ENST00000496510 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.98□□□□□ -0.33
PCNX2-215ENST00000496510 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
PCNX2-215ENST00000496510 BBXQ8WY36 941 aaPredicted RBP12.95□□□□□ -0.34
PCNX2-215ENST00000496510 CFAP44Q96MT7 982 aa12.95□□□□□ -0.34
PCNX2-215ENST00000496510 PAXIP1Q6ZW49 1069 aaPredicted RBP12.94□□□□□ -0.34
PCNX2-215ENST00000496510 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
PCNX2-215ENST00000496510 CHGAP10645 457 aaKnown RBP12.92□□□□□ -0.34
PCNX2-215ENST00000496510 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
PCNX2-215ENST00000496510 NUBP1P53384 320 aa12.87□□□□□ -0.35
PCNX2-215ENST00000496510 GSE1Q14687 1217 aa12.87□□□□□ -0.35
PCNX2-215ENST00000496510 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
PCNX2-215ENST00000496510 TRIM41Q8WV44 630 aa12.84□□□□□ -0.35
PCNX2-215ENST00000496510 PITPNM1O00562 1244 aa12.81□□□□□ -0.36
PCNX2-215ENST00000496510 SPRYD3Q8NCJ5 442 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7128.1 ms