RNA–Protein interactions for RNA: ENST00000496322.1

CLCA4-202, Transcript of chloride channel accessory 4, humanhuman

TSL 3

Gene CLCA4, Length 482 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA4-202ENST00000496322 AEBP2Q6ZN18 517 aaPredicted RBP43.14■■■■■ 4.5
CLCA4-202ENST00000496322 CHIC1Q5VXU3 224 aa41.16■■■■■ 4.18
CLCA4-202ENST00000496322 SENP3Q9H4L4 574 aaPredicted RBP36.74■■■■□ 3.47
CLCA4-202ENST00000496322 PHF23Q9BUL5 403 aaPredicted RBP36.32■■■■□ 3.4
CLCA4-202ENST00000496322 FOXD1Q16676 465 aa34.24■■■■□ 3.07
CLCA4-202ENST00000496322 PLPPR3Q6T4P5 718 aa32.99■■■□□ 2.87
CLCA4-202ENST00000496322 PPP6R1Q9UPN7 881 aa32.2■■■□□ 2.75
CLCA4-202ENST00000496322 ADRA2BP18089 450 aa32.12■■■□□ 2.73
CLCA4-202ENST00000496322 PIAS4Q8N2W9 510 aaPredicted RBP32.06■■■□□ 2.72
CLCA4-202ENST00000496322 MSH5O43196 834 aa31.93■■■□□ 2.7
CLCA4-202ENST00000496322 POTEDQ86YR6 584 aa30.81■■■□□ 2.52
CLCA4-202ENST00000496322 MAPK8IP2Q13387 824 aaPredicted RBP29.44■■■□□ 2.3
CLCA4-202ENST00000496322 SCAF1Q9H7N4 1312 aaKnown RBP29.35■■■□□ 2.29
CLCA4-202ENST00000496322 DMRT2Q9Y5R5 561 aa29.17■■■□□ 2.26
CLCA4-202ENST00000496322 PPP4R3CPQ6ZMV5 832 aa28.97■■■□□ 2.23
CLCA4-202ENST00000496322 CNKSR2Q8WXI2 1034 aa28.35■■■□□ 2.13
CLCA4-202ENST00000496322 HOXD11P31277 338 aaPredicted RBP28.17■■■□□ 2.1
CLCA4-202ENST00000496322 DCAF8L1A6NGE4 600 aa28.04■■■□□ 2.08
CLCA4-202ENST00000496322 RNF216Q9NWF9 866 aaPredicted RBP28.03■■■□□ 2.08
CLCA4-202ENST00000496322 NCBP3Q53F19 620 aaKnown RBP27.91■■■□□ 2.06
CLCA4-202ENST00000496322 NPM3O75607 178 aaKnown RBP27.52■■■□□ 2
CLCA4-202ENST00000496322 CACNB1Q02641 598 aaPredicted RBP27.31■■□□□ 1.96
CLCA4-202ENST00000496322 RNF39Q9H2S5 420 aa27.27■■□□□ 1.96
CLCA4-202ENST00000496322 KCNA4P22459 653 aa27.21■■□□□ 1.95
CLCA4-202ENST00000496322 DNAJC5BQ9UF47 199 aa27.11■■□□□ 1.93
CLCA4-202ENST00000496322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.9■■□□□ 1.9
CLCA4-202ENST00000496322 C1QBPQ07021 282 aaKnown RBP26.88■■□□□ 1.89
CLCA4-202ENST00000496322 U3KPZ7 1027 aaPredicted RBP26.33■■□□□ 1.81
CLCA4-202ENST00000496322 SLC4A2P04920 1241 aa26.22■■□□□ 1.79
CLCA4-202ENST00000496322 SPINK5Q9NQ38 1064 aaPredicted RBP25.91■■□□□ 1.74
CLCA4-202ENST00000496322 CAPN15O75808 1086 aa25.86■■□□□ 1.73
CLCA4-202ENST00000496322 SLC4A1APQ9BWU0 796 aaKnown RBP25.73■■□□□ 1.71
CLCA4-202ENST00000496322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.64■■□□□ 1.7
CLCA4-202ENST00000496322 HNRNPUL2Q1KMD3 747 aaKnown RBP25.64■■□□□ 1.7
CLCA4-202ENST00000496322 DSG3P32926 999 aa25.62■■□□□ 1.69
CLCA4-202ENST00000496322 APLP2Q06481 763 aa25.6■■□□□ 1.69
CLCA4-202ENST00000496322 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.67
CLCA4-202ENST00000496322 SAMD1Q6SPF0 538 aaPredicted RBP25.51■■□□□ 1.67
CLCA4-202ENST00000496322 MYCNP04198 464 aaPredicted RBP25.44■■□□□ 1.66
CLCA4-202ENST00000496322 ZNF219Q9P2Y4 722 aaPredicted RBP25.42■■□□□ 1.66
CLCA4-202ENST00000496322 ABCB7O75027 752 aa25.31■■□□□ 1.64
CLCA4-202ENST00000496322 FOXD4L1Q9NU39 408 aa25.29■■□□□ 1.64
CLCA4-202ENST00000496322 ZBTB22O15209 634 aa25.02■■□□□ 1.6
CLCA4-202ENST00000496322 ATF5Q9Y2D1 282 aaPredicted RBP24.87■■□□□ 1.57
CLCA4-202ENST00000496322 POLA2Q14181 598 aa24.86■■□□□ 1.57
CLCA4-202ENST00000496322 ATXN8OSP0DMR3 200 aa24.47■■□□□ 1.51
CLCA4-202ENST00000496322 RBM42Q9BTD8 480 aaKnown RBP24.42■■□□□ 1.5
CLCA4-202ENST00000496322 ZBTB12Q9Y330 459 aaPredicted RBP24.34■■□□□ 1.49
CLCA4-202ENST00000496322 POTEHQ6S545 545 aa24.2■■□□□ 1.46
CLCA4-202ENST00000496322 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
CLCA4-202ENST00000496322 CSRNP3Q8WYN3 585 aa24.05■■□□□ 1.44
CLCA4-202ENST00000496322 AKT1S1Q96B36 256 aa23.92■■□□□ 1.42
CLCA4-202ENST00000496322 EHMT2Q96KQ7 1210 aa23.92■■□□□ 1.42
CLCA4-202ENST00000496322 FBLN2P98095 1184 aa23.86■■□□□ 1.41
CLCA4-202ENST00000496322 CHRDL2Q6WN34 429 aa23.83■■□□□ 1.41
CLCA4-202ENST00000496322 MKRN4PQ13434 485 aaPredicted RBP23.72■■□□□ 1.39
CLCA4-202ENST00000496322 REM2Q8IYK8 340 aaPredicted RBP23.72■■□□□ 1.39
CLCA4-202ENST00000496322 SPDYE2BA6NHP3 402 aa23.61■■□□□ 1.37
CLCA4-202ENST00000496322 SPDYE6P0CI01 402 aa23.61■■□□□ 1.37
CLCA4-202ENST00000496322 SPDYE2Q495Y8 402 aa23.61■■□□□ 1.37
CLCA4-202ENST00000496322 PITPNM1O00562 1244 aa23.47■■□□□ 1.35
CLCA4-202ENST00000496322 ZNF692Q9BU19 519 aaPredicted RBP23.4■■□□□ 1.34
CLCA4-202ENST00000496322 PIP4P2Q8N4L2 257 aa23.32■■□□□ 1.32
CLCA4-202ENST00000496322 SSUH2Q9Y2M2 353 aa23.31■■□□□ 1.32
CLCA4-202ENST00000496322 FXR2P51116 673 aaKnown RBP eCLIP23.19■■□□□ 1.3
CLCA4-202ENST00000496322 SPDYE1Q8NFV5 336 aaPredicted RBP23.15■■□□□ 1.3
CLCA4-202ENST00000496322 CLEC11AQ9Y240 323 aa23.15■■□□□ 1.3
CLCA4-202ENST00000496322 PABPN1Q86U42 306 aaKnown RBP eCLIP23.06■■□□□ 1.28
CLCA4-202ENST00000496322 PRKAR2AP13861 404 aaKnown RBP22.87■■□□□ 1.25
CLCA4-202ENST00000496322 HAX1O00165 279 aa22.85■■□□□ 1.25
CLCA4-202ENST00000496322 SP7Q8TDD2 431 aaPredicted RBP22.78■■□□□ 1.24
CLCA4-202ENST00000496322 PRR29P0C7W0 189 aa22.77■■□□□ 1.24
CLCA4-202ENST00000496322 SPDYE4A6NLX3 237 aa22.72■■□□□ 1.23
CLCA4-202ENST00000496322 CHADLQ6NUI6 762 aa22.68■■□□□ 1.22
CLCA4-202ENST00000496322 EVX2Q03828 476 aa22.58■■□□□ 1.21
CLCA4-202ENST00000496322 C19orf67A6NJJ6 358 aa22.45■■□□□ 1.18
CLCA4-202ENST00000496322 STAG3Q9UJ98 1225 aa22.44■■□□□ 1.18
CLCA4-202ENST00000496322 FARP1Q9Y4F1 1045 aaPredicted RBP22.34■■□□□ 1.17
CLCA4-202ENST00000496322 CREBZFQ9NS37 354 aa22.25■■□□□ 1.15
CLCA4-202ENST00000496322 PROM2Q8N271 834 aa22.16■■□□□ 1.14
CLCA4-202ENST00000496322 CD44P16070 742 aaKnown RBP22.15■■□□□ 1.14
CLCA4-202ENST00000496322 GABBR2O75899 941 aa22.08■■□□□ 1.13
CLCA4-202ENST00000496322 MNX1P50219 401 aaPredicted RBP21.89■■□□□ 1.09
CLCA4-202ENST00000496322 ZRANB1Q9UGI0 708 aa21.89■■□□□ 1.09
CLCA4-202ENST00000496322 NPM1P06748 294 aaKnown RBP eCLIP21.85■■□□□ 1.09
CLCA4-202ENST00000496322 FKBP8Q14318 412 aa21.83■■□□□ 1.09
CLCA4-202ENST00000496322 ZNF579Q8NAF0 562 aaKnown RBP21.8■■□□□ 1.08
CLCA4-202ENST00000496322 PAK3O75914 559 aaPredicted RBP21.74■■□□□ 1.07
CLCA4-202ENST00000496322 CLCN6P51797 869 aa21.74■■□□□ 1.07
CLCA4-202ENST00000496322 MIER1Q8N108 512 aa21.67■■□□□ 1.06
CLCA4-202ENST00000496322 PLEKHG5O94827 1062 aa21.61■■□□□ 1.05
CLCA4-202ENST00000496322 PHF12Q96QT6 1004 aa21.61■■□□□ 1.05
CLCA4-202ENST00000496322 POTEIP0CG38 1075 aa21.6■■□□□ 1.05
CLCA4-202ENST00000496322 GALR2O43603 387 aaPredicted RBP21.55■■□□□ 1.04
CLCA4-202ENST00000496322 DCBLD2Q96PD2 775 aa21.54■■□□□ 1.04
CLCA4-202ENST00000496322 PLCD3Q8N3E9 789 aa21.53■■□□□ 1.04
CLCA4-202ENST00000496322 TSPYL2Q9H2G4 693 aaPredicted RBP21.5■■□□□ 1.03
CLCA4-202ENST00000496322 LHX8Q68G74 356 aa21.38■■□□□ 1.01
CLCA4-202ENST00000496322 CCDC61Q9Y6R9 512 aa21.35■■□□□ 1.01
CLCA4-202ENST00000496322 RASEFQ8IZ41 740 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms