RNA–Protein interactions for RNA: ENST00000496263.6

PDE4DIP-218, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2

Gene PDE4DIP, Length 687 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-218ENST00000496263 AEBP2Q6ZN18 517 aaPredicted RBP19.38■□□□□ 0.69
PDE4DIP-218ENST00000496263 CHIC1Q5VXU3 224 aa18.63■□□□□ 0.57
PDE4DIP-218ENST00000496263 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
PDE4DIP-218ENST00000496263 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
PDE4DIP-218ENST00000496263 FOXD1Q16676 465 aa15.28■□□□□ 0.04
PDE4DIP-218ENST00000496263 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
PDE4DIP-218ENST00000496263 PPP6R1Q9UPN7 881 aa14.58□□□□□ -0.08
PDE4DIP-218ENST00000496263 ADRA2BP18089 450 aa14.51□□□□□ -0.09
PDE4DIP-218ENST00000496263 PIAS4Q8N2W9 510 aaPredicted RBP14.29□□□□□ -0.12
PDE4DIP-218ENST00000496263 MSH5O43196 834 aa14.08□□□□□ -0.16
PDE4DIP-218ENST00000496263 POTEDQ86YR6 584 aa13.3□□□□□ -0.28
PDE4DIP-218ENST00000496263 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
PDE4DIP-218ENST00000496263 PPP4R3CPQ6ZMV5 832 aa13.19□□□□□ -0.3
PDE4DIP-218ENST00000496263 SCAF1Q9H7N4 1312 aaKnown RBP13.12□□□□□ -0.31
PDE4DIP-218ENST00000496263 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
PDE4DIP-218ENST00000496263 CNKSR2Q8WXI2 1034 aa12.85□□□□□ -0.35
PDE4DIP-218ENST00000496263 HOXD11P31277 338 aaPredicted RBP12.7□□□□□ -0.38
PDE4DIP-218ENST00000496263 NCBP3Q53F19 620 aaKnown RBP12.69□□□□□ -0.38
PDE4DIP-218ENST00000496263 KCNA4P22459 653 aa12.68□□□□□ -0.38
PDE4DIP-218ENST00000496263 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
PDE4DIP-218ENST00000496263 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
PDE4DIP-218ENST00000496263 DCAF8L1A6NGE4 600 aa12.43□□□□□ -0.42
PDE4DIP-218ENST00000496263 DNAJC5BQ9UF47 199 aa12.28□□□□□ -0.44
PDE4DIP-218ENST00000496263 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
PDE4DIP-218ENST00000496263 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDE4DIP-218ENST00000496263 SLC4A2P04920 1241 aa12.02□□□□□ -0.49
PDE4DIP-218ENST00000496263 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
PDE4DIP-218ENST00000496263 U3KPZ7 1027 aaPredicted RBP11.91□□□□□ -0.5
PDE4DIP-218ENST00000496263 CACNB1Q02641 598 aaPredicted RBP11.89□□□□□ -0.51
PDE4DIP-218ENST00000496263 C1QBPQ07021 282 aaKnown RBP11.89□□□□□ -0.51
PDE4DIP-218ENST00000496263 ZBTB22O15209 634 aa11.72□□□□□ -0.53
PDE4DIP-218ENST00000496263 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
PDE4DIP-218ENST00000496263 FOXD4L1Q9NU39 408 aa11.68□□□□□ -0.54
PDE4DIP-218ENST00000496263 SPINK5Q9NQ38 1064 aaPredicted RBP11.65□□□□□ -0.54
PDE4DIP-218ENST00000496263 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
PDE4DIP-218ENST00000496263 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
PDE4DIP-218ENST00000496263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.53□□□□□ -0.56
PDE4DIP-218ENST00000496263 HNRNPUL2Q1KMD3 747 aaKnown RBP11.53□□□□□ -0.56
PDE4DIP-218ENST00000496263 CAPN15O75808 1086 aa11.52□□□□□ -0.57
PDE4DIP-218ENST00000496263 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
PDE4DIP-218ENST00000496263 DSG3P32926 999 aa11.45□□□□□ -0.58
PDE4DIP-218ENST00000496263 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
PDE4DIP-218ENST00000496263 TRHP20396 242 aaPredicted RBP11.43□□□□□ -0.58
PDE4DIP-218ENST00000496263 APLP2Q06481 763 aa11.42□□□□□ -0.58
PDE4DIP-218ENST00000496263 ZNF219Q9P2Y4 722 aaPredicted RBP11.39□□□□□ -0.59
PDE4DIP-218ENST00000496263 ABCB7O75027 752 aa11.34□□□□□ -0.59
PDE4DIP-218ENST00000496263 ATXN8OSP0DMR3 200 aa11.26□□□□□ -0.61
PDE4DIP-218ENST00000496263 POLA2Q14181 598 aa11.21□□□□□ -0.61
PDE4DIP-218ENST00000496263 ZBTB12Q9Y330 459 aaPredicted RBP10.92□□□□□ -0.66
PDE4DIP-218ENST00000496263 MKRN4PQ13434 485 aaPredicted RBP10.91□□□□□ -0.66
PDE4DIP-218ENST00000496263 OSCARQ8IYS5 282 aa10.87□□□□□ -0.67
PDE4DIP-218ENST00000496263 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
PDE4DIP-218ENST00000496263 FBLN2P98095 1184 aa10.8□□□□□ -0.68
PDE4DIP-218ENST00000496263 SPDYE2BA6NHP3 402 aa10.67□□□□□ -0.7
PDE4DIP-218ENST00000496263 SPDYE6P0CI01 402 aa10.67□□□□□ -0.7
PDE4DIP-218ENST00000496263 SPDYE2Q495Y8 402 aa10.67□□□□□ -0.7
PDE4DIP-218ENST00000496263 AKT1S1Q96B36 256 aa10.67□□□□□ -0.7
PDE4DIP-218ENST00000496263 SSUH2Q9Y2M2 353 aa10.62□□□□□ -0.71
PDE4DIP-218ENST00000496263 REM2Q8IYK8 340 aaPredicted RBP10.61□□□□□ -0.71
PDE4DIP-218ENST00000496263 ZNF692Q9BU19 519 aaPredicted RBP10.58□□□□□ -0.72
PDE4DIP-218ENST00000496263 CHRDL2Q6WN34 429 aa10.52□□□□□ -0.73
PDE4DIP-218ENST00000496263 PITPNM1O00562 1244 aa10.51□□□□□ -0.73
PDE4DIP-218ENST00000496263 PABPN1Q86U42 306 aaKnown RBP eCLIP10.47□□□□□ -0.73
PDE4DIP-218ENST00000496263 SPDYE4A6NLX3 237 aa10.46□□□□□ -0.73
PDE4DIP-218ENST00000496263 POTEHQ6S545 545 aa10.45□□□□□ -0.74
PDE4DIP-218ENST00000496263 FKBP8Q14318 412 aa10.42□□□□□ -0.74
PDE4DIP-218ENST00000496263 SPDYE1Q8NFV5 336 aaPredicted RBP10.38□□□□□ -0.75
PDE4DIP-218ENST00000496263 PIP4P2Q8N4L2 257 aa10.37□□□□□ -0.75
PDE4DIP-218ENST00000496263 CLEC11AQ9Y240 323 aa10.36□□□□□ -0.75
PDE4DIP-218ENST00000496263 FXR2P51116 673 aaKnown RBP eCLIP10.35□□□□□ -0.75
PDE4DIP-218ENST00000496263 PROM2Q8N271 834 aa10.34□□□□□ -0.75
PDE4DIP-218ENST00000496263 PRR29P0C7W0 189 aa10.22□□□□□ -0.77
PDE4DIP-218ENST00000496263 PRKAR2AP13861 404 aaKnown RBP10.2□□□□□ -0.78
PDE4DIP-218ENST00000496263 CHADLQ6NUI6 762 aa10.2□□□□□ -0.78
PDE4DIP-218ENST00000496263 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
PDE4DIP-218ENST00000496263 CREBZFQ9NS37 354 aa10.13□□□□□ -0.79
PDE4DIP-218ENST00000496263 EVX2Q03828 476 aa10.06□□□□□ -0.8
PDE4DIP-218ENST00000496263 FARP1Q9Y4F1 1045 aaPredicted RBP10.05□□□□□ -0.8
PDE4DIP-218ENST00000496263 HAX1O00165 279 aa10.03□□□□□ -0.8
PDE4DIP-218ENST00000496263 MNX1P50219 401 aaPredicted RBP10.03□□□□□ -0.8
PDE4DIP-218ENST00000496263 C19orf67A6NJJ6 358 aa10.01□□□□□ -0.81
PDE4DIP-218ENST00000496263 FBXO3Q9UK99 471 aa9.99□□□□□ -0.81
PDE4DIP-218ENST00000496263 SP7Q8TDD2 431 aaPredicted RBP9.94□□□□□ -0.82
PDE4DIP-218ENST00000496263 MIER1Q8N108 512 aa9.91□□□□□ -0.82
PDE4DIP-218ENST00000496263 CD44P16070 742 aaKnown RBP9.89□□□□□ -0.83
PDE4DIP-218ENST00000496263 VASPP50552 380 aaPredicted RBP9.89□□□□□ -0.83
PDE4DIP-218ENST00000496263 PLCD3Q8N3E9 789 aa9.86□□□□□ -0.83
PDE4DIP-218ENST00000496263 NPM1P06748 294 aaKnown RBP eCLIP9.83□□□□□ -0.84
PDE4DIP-218ENST00000496263 ZRANB1Q9UGI0 708 aa9.8□□□□□ -0.84
PDE4DIP-218ENST00000496263 PLEKHG5O94827 1062 aa9.79□□□□□ -0.84
PDE4DIP-218ENST00000496263 GABBR2O75899 941 aa9.78□□□□□ -0.84
PDE4DIP-218ENST00000496263 RASEFQ8IZ41 740 aa9.78□□□□□ -0.84
PDE4DIP-218ENST00000496263 IFNLR1Q8IU57 520 aaPredicted RBP9.77□□□□□ -0.85
PDE4DIP-218ENST00000496263 ZNF579Q8NAF0 562 aaKnown RBP9.77□□□□□ -0.85
PDE4DIP-218ENST00000496263 NUBP1P53384 320 aa9.76□□□□□ -0.85
PDE4DIP-218ENST00000496263 PHF12Q96QT6 1004 aa9.74□□□□□ -0.85
PDE4DIP-218ENST00000496263 TSPYL2Q9H2G4 693 aaPredicted RBP9.73□□□□□ -0.85
PDE4DIP-218ENST00000496263 ZBTB47Q9UFB7 747 aaPredicted RBP9.72□□□□□ -0.85
PDE4DIP-218ENST00000496263 CCDC61Q9Y6R9 512 aa9.72□□□□□ -0.85
PDE4DIP-218ENST00000496263 PAK3O75914 559 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms