RNA–Protein interactions for RNA: ENST00000496092.1

PEX1-209, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 5

Gene PEX1, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-209ENST00000496092 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
PEX1-209ENST00000496092 CHIC1Q5VXU3 224 aa23.17■■□□□ 1.3
PEX1-209ENST00000496092 SENP3Q9H4L4 574 aaPredicted RBP20.57■□□□□ 0.88
PEX1-209ENST00000496092 PHF23Q9BUL5 403 aaPredicted RBP20.31■□□□□ 0.84
PEX1-209ENST00000496092 FOXD1Q16676 465 aa19.1■□□□□ 0.65
PEX1-209ENST00000496092 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
PEX1-209ENST00000496092 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
PEX1-209ENST00000496092 ADRA2BP18089 450 aa18■□□□□ 0.47
PEX1-209ENST00000496092 PIAS4Q8N2W9 510 aaPredicted RBP17.93■□□□□ 0.46
PEX1-209ENST00000496092 MSH5O43196 834 aa17.83■□□□□ 0.44
PEX1-209ENST00000496092 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
PEX1-209ENST00000496092 SCAF1Q9H7N4 1312 aaKnown RBP16.55■□□□□ 0.24
PEX1-209ENST00000496092 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
PEX1-209ENST00000496092 PPP4R3CPQ6ZMV5 832 aa16.36■□□□□ 0.21
PEX1-209ENST00000496092 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
PEX1-209ENST00000496092 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.16
PEX1-209ENST00000496092 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
PEX1-209ENST00000496092 HOXD11P31277 338 aaPredicted RBP15.84■□□□□ 0.13
PEX1-209ENST00000496092 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
PEX1-209ENST00000496092 DCAF8L1A6NGE4 600 aa15.65■□□□□ 0.1
PEX1-209ENST00000496092 NPM3O75607 178 aaKnown RBP15.58■□□□□ 0.08
PEX1-209ENST00000496092 KCNA4P22459 653 aa15.5■□□□□ 0.07
PEX1-209ENST00000496092 DNAJC5BQ9UF47 199 aa15.29■□□□□ 0.04
PEX1-209ENST00000496092 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
PEX1-209ENST00000496092 CACNB1Q02641 598 aaPredicted RBP15.12■□□□□ 0.01
PEX1-209ENST00000496092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.1■□□□□ 0.01
PEX1-209ENST00000496092 C1QBPQ07021 282 aaKnown RBP15.02■□□□□ -0
PEX1-209ENST00000496092 SLC4A2P04920 1241 aa14.8□□□□□ -0.04
PEX1-209ENST00000496092 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
PEX1-209ENST00000496092 SLC4A1APQ9BWU0 796 aaKnown RBP14.7□□□□□ -0.06
PEX1-209ENST00000496092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
PEX1-209ENST00000496092 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
PEX1-209ENST00000496092 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
PEX1-209ENST00000496092 CAPN15O75808 1086 aa14.48□□□□□ -0.09
PEX1-209ENST00000496092 APLP2Q06481 763 aa14.48□□□□□ -0.09
PEX1-209ENST00000496092 MYCNP04198 464 aaPredicted RBP14.43□□□□□ -0.1
PEX1-209ENST00000496092 SAMD1Q6SPF0 538 aaPredicted RBP14.43□□□□□ -0.1
PEX1-209ENST00000496092 FOXD4L1Q9NU39 408 aa14.41□□□□□ -0.1
PEX1-209ENST00000496092 DSG3P32926 999 aa14.33□□□□□ -0.12
PEX1-209ENST00000496092 ZNF219Q9P2Y4 722 aaPredicted RBP14.32□□□□□ -0.12
PEX1-209ENST00000496092 TRHP20396 242 aaPredicted RBP14.3□□□□□ -0.12
PEX1-209ENST00000496092 ZBTB22O15209 634 aa14.23□□□□□ -0.13
PEX1-209ENST00000496092 ABCB7O75027 752 aa14.14□□□□□ -0.15
PEX1-209ENST00000496092 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
PEX1-209ENST00000496092 POLA2Q14181 598 aa13.98□□□□□ -0.17
PEX1-209ENST00000496092 ATXN8OSP0DMR3 200 aa13.97□□□□□ -0.17
PEX1-209ENST00000496092 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
PEX1-209ENST00000496092 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
PEX1-209ENST00000496092 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
PEX1-209ENST00000496092 RBM42Q9BTD8 480 aaKnown RBP13.7□□□□□ -0.22
PEX1-209ENST00000496092 FBLN2P98095 1184 aa13.52□□□□□ -0.25
PEX1-209ENST00000496092 OSCARQ8IYS5 282 aa13.51□□□□□ -0.25
PEX1-209ENST00000496092 AKT1S1Q96B36 256 aa13.43□□□□□ -0.26
PEX1-209ENST00000496092 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
PEX1-209ENST00000496092 SPDYE2BA6NHP3 402 aa13.34□□□□□ -0.27
PEX1-209ENST00000496092 SPDYE6P0CI01 402 aa13.34□□□□□ -0.27
PEX1-209ENST00000496092 SPDYE2Q495Y8 402 aa13.34□□□□□ -0.27
PEX1-209ENST00000496092 POTEHQ6S545 545 aa13.32□□□□□ -0.28
PEX1-209ENST00000496092 REM2Q8IYK8 340 aaPredicted RBP13.28□□□□□ -0.28
PEX1-209ENST00000496092 CHRDL2Q6WN34 429 aa13.27□□□□□ -0.29
PEX1-209ENST00000496092 ZNF692Q9BU19 519 aaPredicted RBP13.21□□□□□ -0.29
PEX1-209ENST00000496092 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
PEX1-209ENST00000496092 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
PEX1-209ENST00000496092 SPDYE1Q8NFV5 336 aaPredicted RBP13.04□□□□□ -0.32
PEX1-209ENST00000496092 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
PEX1-209ENST00000496092 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
PEX1-209ENST00000496092 CLEC11AQ9Y240 323 aa12.99□□□□□ -0.33
PEX1-209ENST00000496092 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
PEX1-209ENST00000496092 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
PEX1-209ENST00000496092 PRR29P0C7W0 189 aa12.82□□□□□ -0.36
PEX1-209ENST00000496092 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
PEX1-209ENST00000496092 STAG3Q9UJ98 1225 aa12.75□□□□□ -0.37
PEX1-209ENST00000496092 HAX1O00165 279 aa12.7□□□□□ -0.38
PEX1-209ENST00000496092 CHADLQ6NUI6 762 aa12.69□□□□□ -0.38
PEX1-209ENST00000496092 PROM2Q8N271 834 aa12.66□□□□□ -0.38
PEX1-209ENST00000496092 SP7Q8TDD2 431 aaPredicted RBP12.61□□□□□ -0.39
PEX1-209ENST00000496092 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
PEX1-209ENST00000496092 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
PEX1-209ENST00000496092 CREBZFQ9NS37 354 aa12.55□□□□□ -0.4
PEX1-209ENST00000496092 FKBP8Q14318 412 aa12.54□□□□□ -0.4
PEX1-209ENST00000496092 EVX2Q03828 476 aa12.52□□□□□ -0.41
PEX1-209ENST00000496092 CD44P16070 742 aaKnown RBP12.42□□□□□ -0.42
PEX1-209ENST00000496092 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
PEX1-209ENST00000496092 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
PEX1-209ENST00000496092 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
PEX1-209ENST00000496092 MIER1Q8N108 512 aa12.31□□□□□ -0.44
PEX1-209ENST00000496092 GABBR2O75899 941 aa12.29□□□□□ -0.44
PEX1-209ENST00000496092 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
PEX1-209ENST00000496092 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.45
PEX1-209ENST00000496092 CLCN6P51797 869 aa12.26□□□□□ -0.45
PEX1-209ENST00000496092 PLCD3Q8N3E9 789 aa12.25□□□□□ -0.45
PEX1-209ENST00000496092 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
PEX1-209ENST00000496092 ZNF579Q8NAF0 562 aaKnown RBP12.24□□□□□ -0.45
PEX1-209ENST00000496092 ZBTB47Q9UFB7 747 aaPredicted RBP12.18□□□□□ -0.46
PEX1-209ENST00000496092 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
PEX1-209ENST00000496092 TSPYL2Q9H2G4 693 aaPredicted RBP12.11□□□□□ -0.47
PEX1-209ENST00000496092 VASPP50552 380 aaPredicted RBP12.07□□□□□ -0.48
PEX1-209ENST00000496092 RASEFQ8IZ41 740 aa12.07□□□□□ -0.48
PEX1-209ENST00000496092 GALR2O43603 387 aaPredicted RBP12.05□□□□□ -0.48
PEX1-209ENST00000496092 CCDC61Q9Y6R9 512 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms