RNA–Protein interactions for RNA: ENST00000496020.1

PCYT1B-204, Transcript of phosphate cytidylyltransferase 1, choline, beta, humanhuman

TSL 3

Gene PCYT1B, Length 856 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1B-204ENST00000496020 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
PCYT1B-204ENST00000496020 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
PCYT1B-204ENST00000496020 SENP3Q9H4L4 574 aaPredicted RBP16.3■□□□□ 0.2
PCYT1B-204ENST00000496020 PHF23Q9BUL5 403 aaPredicted RBP16.12■□□□□ 0.17
PCYT1B-204ENST00000496020 FOXD1Q16676 465 aa15.09■□□□□ 0.01
PCYT1B-204ENST00000496020 PLPPR3Q6T4P5 718 aa14.9□□□□□ -0.02
PCYT1B-204ENST00000496020 ADRA2BP18089 450 aa14.3□□□□□ -0.12
PCYT1B-204ENST00000496020 PPP6R1Q9UPN7 881 aa14.3□□□□□ -0.12
PCYT1B-204ENST00000496020 PIAS4Q8N2W9 510 aaPredicted RBP14.22□□□□□ -0.13
PCYT1B-204ENST00000496020 MSH5O43196 834 aa14.1□□□□□ -0.15
PCYT1B-204ENST00000496020 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
PCYT1B-204ENST00000496020 POTEDQ86YR6 584 aa13.19□□□□□ -0.3
PCYT1B-204ENST00000496020 PPP4R3CPQ6ZMV5 832 aa13.07□□□□□ -0.32
PCYT1B-204ENST00000496020 MAPK8IP2Q13387 824 aaPredicted RBP13.03□□□□□ -0.32
PCYT1B-204ENST00000496020 DMRT2Q9Y5R5 561 aa12.94□□□□□ -0.34
PCYT1B-204ENST00000496020 CNKSR2Q8WXI2 1034 aa12.79□□□□□ -0.36
PCYT1B-204ENST00000496020 NCBP3Q53F19 620 aaKnown RBP12.73□□□□□ -0.37
PCYT1B-204ENST00000496020 RNF216Q9NWF9 866 aaPredicted RBP12.59□□□□□ -0.39
PCYT1B-204ENST00000496020 HOXD11P31277 338 aaPredicted RBP12.58□□□□□ -0.4
PCYT1B-204ENST00000496020 NPM3O75607 178 aaKnown RBP12.46□□□□□ -0.41
PCYT1B-204ENST00000496020 KCNA4P22459 653 aa12.46□□□□□ -0.41
PCYT1B-204ENST00000496020 DCAF8L1A6NGE4 600 aa12.44□□□□□ -0.42
PCYT1B-204ENST00000496020 DNAJC5BQ9UF47 199 aa12.15□□□□□ -0.46
PCYT1B-204ENST00000496020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
PCYT1B-204ENST00000496020 RNF39Q9H2S5 420 aa12□□□□□ -0.49
PCYT1B-204ENST00000496020 CACNB1Q02641 598 aaPredicted RBP11.91□□□□□ -0.5
PCYT1B-204ENST00000496020 C1QBPQ07021 282 aaKnown RBP11.88□□□□□ -0.51
PCYT1B-204ENST00000496020 SLC4A1APQ9BWU0 796 aaKnown RBP11.87□□□□□ -0.51
PCYT1B-204ENST00000496020 SLC4A2P04920 1241 aa11.79□□□□□ -0.52
PCYT1B-204ENST00000496020 U3KPZ7 1027 aaPredicted RBP11.76□□□□□ -0.53
PCYT1B-204ENST00000496020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.63□□□□□ -0.55
PCYT1B-204ENST00000496020 HNRNPUL2Q1KMD3 747 aaKnown RBP11.63□□□□□ -0.55
PCYT1B-204ENST00000496020 APLP2Q06481 763 aa11.6□□□□□ -0.55
PCYT1B-204ENST00000496020 FOXD4L1Q9NU39 408 aa11.58□□□□□ -0.56
PCYT1B-204ENST00000496020 MYCNP04198 464 aaPredicted RBP11.57□□□□□ -0.56
PCYT1B-204ENST00000496020 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
PCYT1B-204ENST00000496020 CAPN15O75808 1086 aa11.52□□□□□ -0.57
PCYT1B-204ENST00000496020 SPINK5Q9NQ38 1064 aaPredicted RBP11.48□□□□□ -0.57
PCYT1B-204ENST00000496020 ZNF219Q9P2Y4 722 aaPredicted RBP11.42□□□□□ -0.58
PCYT1B-204ENST00000496020 ZBTB22O15209 634 aa11.41□□□□□ -0.58
PCYT1B-204ENST00000496020 TRHP20396 242 aaPredicted RBP11.39□□□□□ -0.59
PCYT1B-204ENST00000496020 DSG3P32926 999 aa11.33□□□□□ -0.6
PCYT1B-204ENST00000496020 ABCB7O75027 752 aa11.24□□□□□ -0.61
PCYT1B-204ENST00000496020 EHMT2Q96KQ7 1210 aa11.24□□□□□ -0.61
PCYT1B-204ENST00000496020 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
PCYT1B-204ENST00000496020 CSRNP3Q8WYN3 585 aa11.19□□□□□ -0.62
PCYT1B-204ENST00000496020 ATF5Q9Y2D1 282 aaPredicted RBP11.18□□□□□ -0.62
PCYT1B-204ENST00000496020 POLA2Q14181 598 aa11.14□□□□□ -0.63
PCYT1B-204ENST00000496020 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
PCYT1B-204ENST00000496020 RBM42Q9BTD8 480 aaKnown RBP10.89□□□□□ -0.67
PCYT1B-204ENST00000496020 FBLN2P98095 1184 aa10.86□□□□□ -0.67
PCYT1B-204ENST00000496020 OSCARQ8IYS5 282 aa10.76□□□□□ -0.69
PCYT1B-204ENST00000496020 MKRN4PQ13434 485 aaPredicted RBP10.69□□□□□ -0.7
PCYT1B-204ENST00000496020 AKT1S1Q96B36 256 aa10.67□□□□□ -0.7
PCYT1B-204ENST00000496020 SPDYE2BA6NHP3 402 aa10.65□□□□□ -0.7
PCYT1B-204ENST00000496020 SPDYE6P0CI01 402 aa10.65□□□□□ -0.7
PCYT1B-204ENST00000496020 SPDYE2Q495Y8 402 aa10.65□□□□□ -0.7
PCYT1B-204ENST00000496020 ZNF692Q9BU19 519 aaPredicted RBP10.58□□□□□ -0.72
PCYT1B-204ENST00000496020 REM2Q8IYK8 340 aaPredicted RBP10.54□□□□□ -0.72
PCYT1B-204ENST00000496020 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
PCYT1B-204ENST00000496020 CHRDL2Q6WN34 429 aa10.48□□□□□ -0.73
PCYT1B-204ENST00000496020 POTEHQ6S545 545 aa10.42□□□□□ -0.74
PCYT1B-204ENST00000496020 SPDYE4A6NLX3 237 aa10.41□□□□□ -0.74
PCYT1B-204ENST00000496020 PITPNM1O00562 1244 aa10.41□□□□□ -0.74
PCYT1B-204ENST00000496020 SPDYE1Q8NFV5 336 aaPredicted RBP10.41□□□□□ -0.74
PCYT1B-204ENST00000496020 PABPN1Q86U42 306 aaKnown RBP eCLIP10.4□□□□□ -0.74
PCYT1B-204ENST00000496020 CLEC11AQ9Y240 323 aa10.36□□□□□ -0.75
PCYT1B-204ENST00000496020 PIP4P2Q8N4L2 257 aa10.28□□□□□ -0.76
PCYT1B-204ENST00000496020 FXR2P51116 673 aaKnown RBP eCLIP10.27□□□□□ -0.77
PCYT1B-204ENST00000496020 PRR29P0C7W0 189 aa10.25□□□□□ -0.77
PCYT1B-204ENST00000496020 STAG3Q9UJ98 1225 aa10.25□□□□□ -0.77
PCYT1B-204ENST00000496020 PRKAR2AP13861 404 aaKnown RBP10.17□□□□□ -0.78
PCYT1B-204ENST00000496020 FKBP8Q14318 412 aa10.17□□□□□ -0.78
PCYT1B-204ENST00000496020 PROM2Q8N271 834 aa10.15□□□□□ -0.78
PCYT1B-204ENST00000496020 CHADLQ6NUI6 762 aa10.09□□□□□ -0.79
PCYT1B-204ENST00000496020 HAX1O00165 279 aa10.06□□□□□ -0.8
PCYT1B-204ENST00000496020 CREBZFQ9NS37 354 aa10□□□□□ -0.81
PCYT1B-204ENST00000496020 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
PCYT1B-204ENST00000496020 PLEKHG5O94827 1062 aa9.96□□□□□ -0.82
PCYT1B-204ENST00000496020 FBXO3Q9UK99 471 aa9.95□□□□□ -0.82
PCYT1B-204ENST00000496020 C19orf67A6NJJ6 358 aa9.93□□□□□ -0.82
PCYT1B-204ENST00000496020 NPM1P06748 294 aaKnown RBP eCLIP9.92□□□□□ -0.82
PCYT1B-204ENST00000496020 MIER1Q8N108 512 aa9.92□□□□□ -0.82
PCYT1B-204ENST00000496020 SP7Q8TDD2 431 aaPredicted RBP9.91□□□□□ -0.82
PCYT1B-204ENST00000496020 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
PCYT1B-204ENST00000496020 CD44P16070 742 aaKnown RBP9.87□□□□□ -0.83
PCYT1B-204ENST00000496020 EVX2Q03828 476 aa9.85□□□□□ -0.83
PCYT1B-204ENST00000496020 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
PCYT1B-204ENST00000496020 ZBTB47Q9UFB7 747 aaPredicted RBP9.84□□□□□ -0.83
PCYT1B-204ENST00000496020 PAK3O75914 559 aaPredicted RBP9.83□□□□□ -0.84
PCYT1B-204ENST00000496020 ZRANB1Q9UGI0 708 aa9.78□□□□□ -0.84
PCYT1B-204ENST00000496020 VASPP50552 380 aaPredicted RBP9.75□□□□□ -0.85
PCYT1B-204ENST00000496020 CLCN6P51797 869 aa9.75□□□□□ -0.85
PCYT1B-204ENST00000496020 ZNF579Q8NAF0 562 aaKnown RBP9.72□□□□□ -0.85
PCYT1B-204ENST00000496020 GABBR2O75899 941 aa9.71□□□□□ -0.86
PCYT1B-204ENST00000496020 KLHL34Q8N239 644 aa9.7□□□□□ -0.86
PCYT1B-204ENST00000496020 TSPYL2Q9H2G4 693 aaPredicted RBP9.69□□□□□ -0.86
PCYT1B-204ENST00000496020 RASEFQ8IZ41 740 aa9.65□□□□□ -0.86
PCYT1B-204ENST00000496020 NUBP1P53384 320 aa9.63□□□□□ -0.87
PCYT1B-204ENST00000496020 FAM212AQ96EL1 285 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 364.3 ms