RNA–Protein interactions for RNA: ENST00000495418.5

GCSAM-207, Transcript of germinal center associated signaling and motility, humanhuman

TSL 3

Gene GCSAM, Length 871 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSAM-207ENST00000495418 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
GCSAM-207ENST00000495418 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
GCSAM-207ENST00000495418 SENP3Q9H4L4 574 aaPredicted RBP19.27■□□□□ 0.68
GCSAM-207ENST00000495418 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
GCSAM-207ENST00000495418 FOXD1Q16676 465 aa17.85■□□□□ 0.45
GCSAM-207ENST00000495418 PLPPR3Q6T4P5 718 aa16.95■□□□□ 0.3
GCSAM-207ENST00000495418 MSH5O43196 834 aa16.91■□□□□ 0.3
GCSAM-207ENST00000495418 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
GCSAM-207ENST00000495418 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
GCSAM-207ENST00000495418 PPP6R1Q9UPN7 881 aa16.52■□□□□ 0.24
GCSAM-207ENST00000495418 ADRA2BP18089 450 aa16.48■□□□□ 0.23
GCSAM-207ENST00000495418 SCAF1Q9H7N4 1312 aaKnown RBP15.3■□□□□ 0.04
GCSAM-207ENST00000495418 DMRT2Q9Y5R5 561 aa15.22■□□□□ 0.03
GCSAM-207ENST00000495418 MAPK8IP2Q13387 824 aaPredicted RBP15.15■□□□□ 0.02
GCSAM-207ENST00000495418 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
GCSAM-207ENST00000495418 HOXD11P31277 338 aaPredicted RBP14.61□□□□□ -0.07
GCSAM-207ENST00000495418 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
GCSAM-207ENST00000495418 DCAF8L1A6NGE4 600 aa14.57□□□□□ -0.08
GCSAM-207ENST00000495418 CACNB1Q02641 598 aaPredicted RBP14.53□□□□□ -0.08
GCSAM-207ENST00000495418 RNF216Q9NWF9 866 aaPredicted RBP14.49□□□□□ -0.09
GCSAM-207ENST00000495418 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
GCSAM-207ENST00000495418 NCBP3Q53F19 620 aaKnown RBP14.28□□□□□ -0.12
GCSAM-207ENST00000495418 DNAJC5BQ9UF47 199 aa14.26□□□□□ -0.13
GCSAM-207ENST00000495418 C1QBPQ07021 282 aaKnown RBP14.2□□□□□ -0.14
GCSAM-207ENST00000495418 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.94□□□□□ -0.18
GCSAM-207ENST00000495418 NPM3O75607 178 aaKnown RBP13.93□□□□□ -0.18
GCSAM-207ENST00000495418 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
GCSAM-207ENST00000495418 KCNA4P22459 653 aa13.51□□□□□ -0.25
GCSAM-207ENST00000495418 CAPN15O75808 1086 aa13.43□□□□□ -0.26
GCSAM-207ENST00000495418 APLP2Q06481 763 aa13.39□□□□□ -0.27
GCSAM-207ENST00000495418 DSG3P32926 999 aa13.36□□□□□ -0.27
GCSAM-207ENST00000495418 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
GCSAM-207ENST00000495418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
GCSAM-207ENST00000495418 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
GCSAM-207ENST00000495418 SLC4A2P04920 1241 aa13.31□□□□□ -0.28
GCSAM-207ENST00000495418 ZNF219Q9P2Y4 722 aaPredicted RBP13.23□□□□□ -0.29
GCSAM-207ENST00000495418 SAMD1Q6SPF0 538 aaPredicted RBP13.19□□□□□ -0.3
GCSAM-207ENST00000495418 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
GCSAM-207ENST00000495418 ABCB7O75027 752 aa13.03□□□□□ -0.32
GCSAM-207ENST00000495418 POTEHQ6S545 545 aa13.02□□□□□ -0.33
GCSAM-207ENST00000495418 MYCNP04198 464 aaPredicted RBP12.98□□□□□ -0.33
GCSAM-207ENST00000495418 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
GCSAM-207ENST00000495418 SLC4A1APQ9BWU0 796 aaKnown RBP12.8□□□□□ -0.36
GCSAM-207ENST00000495418 POLA2Q14181 598 aa12.77□□□□□ -0.37
GCSAM-207ENST00000495418 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
GCSAM-207ENST00000495418 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
GCSAM-207ENST00000495418 CHRDL2Q6WN34 429 aa12.56□□□□□ -0.4
GCSAM-207ENST00000495418 AKT1S1Q96B36 256 aa12.51□□□□□ -0.41
GCSAM-207ENST00000495418 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
GCSAM-207ENST00000495418 ATXN8OSP0DMR3 200 aa12.44□□□□□ -0.42
GCSAM-207ENST00000495418 ZBTB22O15209 634 aa12.36□□□□□ -0.43
GCSAM-207ENST00000495418 OSCARQ8IYS5 282 aa12.35□□□□□ -0.43
GCSAM-207ENST00000495418 REM2Q8IYK8 340 aaPredicted RBP12.32□□□□□ -0.44
GCSAM-207ENST00000495418 FBLN2P98095 1184 aa12.24□□□□□ -0.45
GCSAM-207ENST00000495418 SPDYE2BA6NHP3 402 aa12.2□□□□□ -0.46
GCSAM-207ENST00000495418 SPDYE6P0CI01 402 aa12.2□□□□□ -0.46
GCSAM-207ENST00000495418 SPDYE2Q495Y8 402 aa12.2□□□□□ -0.46
GCSAM-207ENST00000495418 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
GCSAM-207ENST00000495418 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
GCSAM-207ENST00000495418 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
GCSAM-207ENST00000495418 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.47
GCSAM-207ENST00000495418 HAX1O00165 279 aa12.04□□□□□ -0.48
GCSAM-207ENST00000495418 SPDYE1Q8NFV5 336 aaPredicted RBP12.02□□□□□ -0.49
GCSAM-207ENST00000495418 ZNF692Q9BU19 519 aaPredicted RBP11.98□□□□□ -0.49
GCSAM-207ENST00000495418 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
GCSAM-207ENST00000495418 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
GCSAM-207ENST00000495418 CLEC11AQ9Y240 323 aa11.93□□□□□ -0.5
GCSAM-207ENST00000495418 PRKAR2AP13861 404 aaKnown RBP11.88□□□□□ -0.51
GCSAM-207ENST00000495418 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
GCSAM-207ENST00000495418 PRR29P0C7W0 189 aa11.76□□□□□ -0.53
GCSAM-207ENST00000495418 C19orf67A6NJJ6 358 aa11.75□□□□□ -0.53
GCSAM-207ENST00000495418 EVX2Q03828 476 aa11.75□□□□□ -0.53
GCSAM-207ENST00000495418 EHMT2Q96KQ7 1210 aa11.73□□□□□ -0.53
GCSAM-207ENST00000495418 CSRNP3Q8WYN3 585 aa11.72□□□□□ -0.53
GCSAM-207ENST00000495418 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
GCSAM-207ENST00000495418 GABBR2O75899 941 aa11.58□□□□□ -0.56
GCSAM-207ENST00000495418 CLCN6P51797 869 aa11.57□□□□□ -0.56
GCSAM-207ENST00000495418 STAG3Q9UJ98 1225 aa11.56□□□□□ -0.56
GCSAM-207ENST00000495418 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
GCSAM-207ENST00000495418 CD44P16070 742 aaKnown RBP11.51□□□□□ -0.57
GCSAM-207ENST00000495418 SPDYE4A6NLX3 237 aa11.43□□□□□ -0.58
GCSAM-207ENST00000495418 LHX8Q68G74 356 aa11.39□□□□□ -0.59
GCSAM-207ENST00000495418 CREBZFQ9NS37 354 aa11.36□□□□□ -0.59
GCSAM-207ENST00000495418 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
GCSAM-207ENST00000495418 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
GCSAM-207ENST00000495418 PAK3O75914 559 aaPredicted RBP11.31□□□□□ -0.6
GCSAM-207ENST00000495418 DCBLD2Q96PD2 775 aa11.31□□□□□ -0.6
GCSAM-207ENST00000495418 NPM1P06748 294 aaKnown RBP eCLIP11.28□□□□□ -0.6
GCSAM-207ENST00000495418 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
GCSAM-207ENST00000495418 GALR2O43603 387 aaPredicted RBP11.14□□□□□ -0.63
GCSAM-207ENST00000495418 MNX1P50219 401 aaPredicted RBP11.14□□□□□ -0.63
GCSAM-207ENST00000495418 PROM2Q8N271 834 aa11.12□□□□□ -0.63
GCSAM-207ENST00000495418 PHF12Q96QT6 1004 aa11.09□□□□□ -0.63
GCSAM-207ENST00000495418 PLEKHG5O94827 1062 aa11.06□□□□□ -0.64
GCSAM-207ENST00000495418 ASTLQ6HA08 431 aaPredicted RBP10.97□□□□□ -0.65
GCSAM-207ENST00000495418 MS4A3Q96HJ5 214 aa10.96□□□□□ -0.65
GCSAM-207ENST00000495418 SLC39A7Q92504 469 aa10.95□□□□□ -0.66
GCSAM-207ENST00000495418 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
GCSAM-207ENST00000495418 C7P10643 843 aa10.94□□□□□ -0.66
GCSAM-207ENST00000495418 MIER1Q8N108 512 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms