RNA–Protein interactions for RNA: ENST00000495342.1

ATXN2-213, Transcript of ataxin 2, humanhuman

TSL 3

Gene ATXN2, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-213ENST00000495342 AEBP2Q6ZN18 517 aaPredicted RBP25.23■■□□□ 1.63
ATXN2-213ENST00000495342 CHIC1Q5VXU3 224 aa24.64■■□□□ 1.54
ATXN2-213ENST00000495342 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
ATXN2-213ENST00000495342 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
ATXN2-213ENST00000495342 PLPPR3Q6T4P5 718 aa20.01■□□□□ 0.79
ATXN2-213ENST00000495342 FOXD1Q16676 465 aa19.85■□□□□ 0.77
ATXN2-213ENST00000495342 PPP6R1Q9UPN7 881 aa19.15■□□□□ 0.66
ATXN2-213ENST00000495342 ADRA2BP18089 450 aa19.14■□□□□ 0.65
ATXN2-213ENST00000495342 PIAS4Q8N2W9 510 aaPredicted RBP18.71■□□□□ 0.59
ATXN2-213ENST00000495342 MSH5O43196 834 aa18.24■□□□□ 0.51
ATXN2-213ENST00000495342 PPP4R3CPQ6ZMV5 832 aa17.65■□□□□ 0.42
ATXN2-213ENST00000495342 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
ATXN2-213ENST00000495342 MAPK8IP2Q13387 824 aaPredicted RBP17.35■□□□□ 0.37
ATXN2-213ENST00000495342 KCNA4P22459 653 aa17.32■□□□□ 0.36
ATXN2-213ENST00000495342 NCBP3Q53F19 620 aaKnown RBP17.17■□□□□ 0.34
ATXN2-213ENST00000495342 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
ATXN2-213ENST00000495342 DMRT2Q9Y5R5 561 aa17.07■□□□□ 0.32
ATXN2-213ENST00000495342 NPM3O75607 178 aaKnown RBP16.96■□□□□ 0.31
ATXN2-213ENST00000495342 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
ATXN2-213ENST00000495342 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
ATXN2-213ENST00000495342 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
ATXN2-213ENST00000495342 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
ATXN2-213ENST00000495342 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
ATXN2-213ENST00000495342 DCAF8L1A6NGE4 600 aa16.32■□□□□ 0.2
ATXN2-213ENST00000495342 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
ATXN2-213ENST00000495342 SLC4A2P04920 1241 aa16.03■□□□□ 0.16
ATXN2-213ENST00000495342 ZBTB22O15209 634 aa15.96■□□□□ 0.15
ATXN2-213ENST00000495342 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.93■□□□□ 0.14
ATXN2-213ENST00000495342 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
ATXN2-213ENST00000495342 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
ATXN2-213ENST00000495342 U3KPZ7 1027 aaPredicted RBP15.7■□□□□ 0.1
ATXN2-213ENST00000495342 RNF39Q9H2S5 420 aa15.67■□□□□ 0.1
ATXN2-213ENST00000495342 MYCNP04198 464 aaPredicted RBP15.65■□□□□ 0.1
ATXN2-213ENST00000495342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.07
ATXN2-213ENST00000495342 HNRNPUL2Q1KMD3 747 aaKnown RBP15.46■□□□□ 0.07
ATXN2-213ENST00000495342 C1QBPQ07021 282 aaKnown RBP15.45■□□□□ 0.06
ATXN2-213ENST00000495342 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
ATXN2-213ENST00000495342 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
ATXN2-213ENST00000495342 APLP2Q06481 763 aa15.28■□□□□ 0.04
ATXN2-213ENST00000495342 ATF5Q9Y2D1 282 aaPredicted RBP15.28■□□□□ 0.04
ATXN2-213ENST00000495342 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
ATXN2-213ENST00000495342 CACNB1Q02641 598 aaPredicted RBP15.21■□□□□ 0.03
ATXN2-213ENST00000495342 CAPN15O75808 1086 aa15.18■□□□□ 0.02
ATXN2-213ENST00000495342 TRHP20396 242 aaPredicted RBP15.12■□□□□ 0.01
ATXN2-213ENST00000495342 ZNF219Q9P2Y4 722 aaPredicted RBP15.09■□□□□ 0.01
ATXN2-213ENST00000495342 DSG3P32926 999 aa14.92□□□□□ -0.02
ATXN2-213ENST00000495342 ABCB7O75027 752 aa14.91□□□□□ -0.02
ATXN2-213ENST00000495342 POLA2Q14181 598 aa14.89□□□□□ -0.03
ATXN2-213ENST00000495342 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
ATXN2-213ENST00000495342 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
ATXN2-213ENST00000495342 FBLN2P98095 1184 aa14.57□□□□□ -0.08
ATXN2-213ENST00000495342 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
ATXN2-213ENST00000495342 FKBP8Q14318 412 aa14.33□□□□□ -0.12
ATXN2-213ENST00000495342 SPDYE4A6NLX3 237 aa14.27□□□□□ -0.13
ATXN2-213ENST00000495342 SPDYE2BA6NHP3 402 aa14.22□□□□□ -0.13
ATXN2-213ENST00000495342 SPDYE6P0CI01 402 aa14.22□□□□□ -0.13
ATXN2-213ENST00000495342 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
ATXN2-213ENST00000495342 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
ATXN2-213ENST00000495342 RBM42Q9BTD8 480 aaKnown RBP14.17□□□□□ -0.14
ATXN2-213ENST00000495342 SSUH2Q9Y2M2 353 aa14.14□□□□□ -0.15
ATXN2-213ENST00000495342 PROM2Q8N271 834 aa14.05□□□□□ -0.16
ATXN2-213ENST00000495342 AKT1S1Q96B36 256 aa14.03□□□□□ -0.16
ATXN2-213ENST00000495342 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
ATXN2-213ENST00000495342 REM2Q8IYK8 340 aaPredicted RBP13.92□□□□□ -0.18
ATXN2-213ENST00000495342 SPDYE1Q8NFV5 336 aaPredicted RBP13.8□□□□□ -0.2
ATXN2-213ENST00000495342 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
ATXN2-213ENST00000495342 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
ATXN2-213ENST00000495342 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
ATXN2-213ENST00000495342 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
ATXN2-213ENST00000495342 PRR29P0C7W0 189 aa13.62□□□□□ -0.23
ATXN2-213ENST00000495342 VASPP50552 380 aaPredicted RBP13.62□□□□□ -0.23
ATXN2-213ENST00000495342 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
ATXN2-213ENST00000495342 MIER1Q8N108 512 aa13.53□□□□□ -0.24
ATXN2-213ENST00000495342 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
ATXN2-213ENST00000495342 FXR2P51116 673 aaKnown RBP eCLIP13.49□□□□□ -0.25
ATXN2-213ENST00000495342 CREBZFQ9NS37 354 aa13.49□□□□□ -0.25
ATXN2-213ENST00000495342 IFNLR1Q8IU57 520 aaPredicted RBP13.46□□□□□ -0.25
ATXN2-213ENST00000495342 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
ATXN2-213ENST00000495342 CHADLQ6NUI6 762 aa13.43□□□□□ -0.26
ATXN2-213ENST00000495342 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
ATXN2-213ENST00000495342 PRKAR2AP13861 404 aaKnown RBP13.4□□□□□ -0.26
ATXN2-213ENST00000495342 KLHL34Q8N239 644 aa13.37□□□□□ -0.27
ATXN2-213ENST00000495342 MNX1P50219 401 aaPredicted RBP13.36□□□□□ -0.27
ATXN2-213ENST00000495342 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
ATXN2-213ENST00000495342 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
ATXN2-213ENST00000495342 SPOCK2Q92563 424 aa13.26□□□□□ -0.29
ATXN2-213ENST00000495342 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
ATXN2-213ENST00000495342 NUBP1P53384 320 aa13.2□□□□□ -0.3
ATXN2-213ENST00000495342 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
ATXN2-213ENST00000495342 POTEHQ6S545 545 aa13.12□□□□□ -0.31
ATXN2-213ENST00000495342 RTN4Q9NQC3 1192 aaKnown RBP13.12□□□□□ -0.31
ATXN2-213ENST00000495342 AMER1Q5JTC6 1135 aaPredicted RBP13.1□□□□□ -0.31
ATXN2-213ENST00000495342 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
ATXN2-213ENST00000495342 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
ATXN2-213ENST00000495342 FAM212AQ96EL1 285 aa13.05□□□□□ -0.32
ATXN2-213ENST00000495342 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
ATXN2-213ENST00000495342 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
ATXN2-213ENST00000495342 PKD2Q13563 968 aa13.03□□□□□ -0.32
ATXN2-213ENST00000495342 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
ATXN2-213ENST00000495342 GSE1Q14687 1217 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms