RNA–Protein interactions for RNA: ENST00000495240.1

LCA5L-221, Transcript of LCA5L, lebercilin like, humanhuman

TSL 2

Gene LCA5L, Length 972 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5L-221ENST00000495240 AEBP2Q6ZN18 517 aaPredicted RBP30.62■■■□□ 2.49
LCA5L-221ENST00000495240 CHIC1Q5VXU3 224 aa28.85■■■□□ 2.21
LCA5L-221ENST00000495240 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
LCA5L-221ENST00000495240 PHF23Q9BUL5 403 aaPredicted RBP25.76■■□□□ 1.71
LCA5L-221ENST00000495240 FOXD1Q16676 465 aa24.39■■□□□ 1.49
LCA5L-221ENST00000495240 PLPPR3Q6T4P5 718 aa22.94■■□□□ 1.26
LCA5L-221ENST00000495240 MSH5O43196 834 aa22.9■■□□□ 1.26
LCA5L-221ENST00000495240 POTEDQ86YR6 584 aa22.75■■□□□ 1.23
LCA5L-221ENST00000495240 PIAS4Q8N2W9 510 aaPredicted RBP22.73■■□□□ 1.23
LCA5L-221ENST00000495240 PPP6R1Q9UPN7 881 aa22.64■■□□□ 1.21
LCA5L-221ENST00000495240 ADRA2BP18089 450 aa22.54■■□□□ 1.2
LCA5L-221ENST00000495240 MAPK8IP2Q13387 824 aaPredicted RBP20.77■□□□□ 0.92
LCA5L-221ENST00000495240 DMRT2Q9Y5R5 561 aa20.7■□□□□ 0.9
LCA5L-221ENST00000495240 SCAF1Q9H7N4 1312 aaKnown RBP20.61■□□□□ 0.89
LCA5L-221ENST00000495240 PPP4R3CPQ6ZMV5 832 aa20.08■□□□□ 0.81
LCA5L-221ENST00000495240 HOXD11P31277 338 aaPredicted RBP19.86■□□□□ 0.77
LCA5L-221ENST00000495240 DCAF8L1A6NGE4 600 aa19.81■□□□□ 0.76
LCA5L-221ENST00000495240 CACNB1Q02641 598 aaPredicted RBP19.77■□□□□ 0.76
LCA5L-221ENST00000495240 CNKSR2Q8WXI2 1034 aa19.76■□□□□ 0.75
LCA5L-221ENST00000495240 RNF216Q9NWF9 866 aaPredicted RBP19.64■□□□□ 0.73
LCA5L-221ENST00000495240 RNF39Q9H2S5 420 aa19.54■□□□□ 0.72
LCA5L-221ENST00000495240 C1QBPQ07021 282 aaKnown RBP19.23■□□□□ 0.67
LCA5L-221ENST00000495240 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
LCA5L-221ENST00000495240 NCBP3Q53F19 620 aaKnown RBP19.22■□□□□ 0.67
LCA5L-221ENST00000495240 NPM3O75607 178 aaKnown RBP18.97■□□□□ 0.63
LCA5L-221ENST00000495240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.61
LCA5L-221ENST00000495240 U3KPZ7 1027 aaPredicted RBP18.49■□□□□ 0.55
LCA5L-221ENST00000495240 KCNA4P22459 653 aa18.4■□□□□ 0.54
LCA5L-221ENST00000495240 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
LCA5L-221ENST00000495240 CAPN15O75808 1086 aa18.24■□□□□ 0.51
LCA5L-221ENST00000495240 DSG3P32926 999 aa18.22■□□□□ 0.51
LCA5L-221ENST00000495240 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
LCA5L-221ENST00000495240 APLP2Q06481 763 aa17.92■□□□□ 0.46
LCA5L-221ENST00000495240 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
LCA5L-221ENST00000495240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
LCA5L-221ENST00000495240 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
LCA5L-221ENST00000495240 ZNF219Q9P2Y4 722 aaPredicted RBP17.86■□□□□ 0.45
LCA5L-221ENST00000495240 ABCB7O75027 752 aa17.8■□□□□ 0.44
LCA5L-221ENST00000495240 POTEHQ6S545 545 aa17.77■□□□□ 0.44
LCA5L-221ENST00000495240 SAMD1Q6SPF0 538 aaPredicted RBP17.76■□□□□ 0.43
LCA5L-221ENST00000495240 MYCNP04198 464 aaPredicted RBP17.54■□□□□ 0.4
LCA5L-221ENST00000495240 POLA2Q14181 598 aa17.38■□□□□ 0.37
LCA5L-221ENST00000495240 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
LCA5L-221ENST00000495240 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
LCA5L-221ENST00000495240 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
LCA5L-221ENST00000495240 ATF5Q9Y2D1 282 aaPredicted RBP17.17■□□□□ 0.34
LCA5L-221ENST00000495240 CHRDL2Q6WN34 429 aa17.09■□□□□ 0.33
LCA5L-221ENST00000495240 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
LCA5L-221ENST00000495240 ZBTB22O15209 634 aa16.93■□□□□ 0.3
LCA5L-221ENST00000495240 AKT1S1Q96B36 256 aa16.93■□□□□ 0.3
LCA5L-221ENST00000495240 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
LCA5L-221ENST00000495240 REM2Q8IYK8 340 aaPredicted RBP16.77■□□□□ 0.28
LCA5L-221ENST00000495240 ATXN8OSP0DMR3 200 aa16.74■□□□□ 0.27
LCA5L-221ENST00000495240 PIP4P2Q8N4L2 257 aa16.63■□□□□ 0.25
LCA5L-221ENST00000495240 PITPNM1O00562 1244 aa16.6■□□□□ 0.25
LCA5L-221ENST00000495240 SP7Q8TDD2 431 aaPredicted RBP16.56■□□□□ 0.24
LCA5L-221ENST00000495240 FXR2P51116 673 aaKnown RBP eCLIP16.51■□□□□ 0.23
LCA5L-221ENST00000495240 FBLN2P98095 1184 aa16.48■□□□□ 0.23
LCA5L-221ENST00000495240 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
LCA5L-221ENST00000495240 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
LCA5L-221ENST00000495240 SPDYE2Q495Y8 402 aa16.47■□□□□ 0.23
LCA5L-221ENST00000495240 HAX1O00165 279 aa16.37■□□□□ 0.21
LCA5L-221ENST00000495240 MKRN4PQ13434 485 aaPredicted RBP16.37■□□□□ 0.21
LCA5L-221ENST00000495240 SSUH2Q9Y2M2 353 aa16.24■□□□□ 0.19
LCA5L-221ENST00000495240 SPDYE1Q8NFV5 336 aaPredicted RBP16.23■□□□□ 0.19
LCA5L-221ENST00000495240 ZNF692Q9BU19 519 aaPredicted RBP16.23■□□□□ 0.19
LCA5L-221ENST00000495240 CLEC11AQ9Y240 323 aa16.2■□□□□ 0.18
LCA5L-221ENST00000495240 EVX2Q03828 476 aa16.19■□□□□ 0.18
LCA5L-221ENST00000495240 PRKAR2AP13861 404 aaKnown RBP16.16■□□□□ 0.18
LCA5L-221ENST00000495240 C19orf67A6NJJ6 358 aa15.99■□□□□ 0.15
LCA5L-221ENST00000495240 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
LCA5L-221ENST00000495240 CSRNP3Q8WYN3 585 aa15.94■□□□□ 0.14
LCA5L-221ENST00000495240 CHADLQ6NUI6 762 aa15.93■□□□□ 0.14
LCA5L-221ENST00000495240 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
LCA5L-221ENST00000495240 GABBR2O75899 941 aa15.8■□□□□ 0.12
LCA5L-221ENST00000495240 FARP1Q9Y4F1 1045 aaPredicted RBP15.68■□□□□ 0.1
LCA5L-221ENST00000495240 CD44P16070 742 aaKnown RBP15.63■□□□□ 0.09
LCA5L-221ENST00000495240 EHMT2Q96KQ7 1210 aa15.57■□□□□ 0.08
LCA5L-221ENST00000495240 LHX8Q68G74 356 aa15.53■□□□□ 0.08
LCA5L-221ENST00000495240 STAG3Q9UJ98 1225 aa15.5■□□□□ 0.07
LCA5L-221ENST00000495240 POTEIP0CG38 1075 aa15.48■□□□□ 0.07
LCA5L-221ENST00000495240 CLCN6P51797 869 aa15.48■□□□□ 0.07
LCA5L-221ENST00000495240 CREBZFQ9NS37 354 aa15.48■□□□□ 0.07
LCA5L-221ENST00000495240 SPDYE4A6NLX3 237 aa15.46■□□□□ 0.07
LCA5L-221ENST00000495240 ZNF579Q8NAF0 562 aaKnown RBP15.4■□□□□ 0.06
LCA5L-221ENST00000495240 ZRANB1Q9UGI0 708 aa15.37■□□□□ 0.05
LCA5L-221ENST00000495240 DCBLD2Q96PD2 775 aa15.31■□□□□ 0.04
LCA5L-221ENST00000495240 GALR2O43603 387 aaPredicted RBP15.22■□□□□ 0.03
LCA5L-221ENST00000495240 MNX1P50219 401 aaPredicted RBP15.2■□□□□ 0.02
LCA5L-221ENST00000495240 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
LCA5L-221ENST00000495240 NPM1P06748 294 aaKnown RBP eCLIP15.17■□□□□ 0.02
LCA5L-221ENST00000495240 PHF12Q96QT6 1004 aa15.14■□□□□ 0.01
LCA5L-221ENST00000495240 PROM2Q8N271 834 aa15.09■□□□□ 0.01
LCA5L-221ENST00000495240 POTEB2H3BUK9 544 aa14.97□□□□□ -0.01
LCA5L-221ENST00000495240 PELP1Q8IZL8 1130 aaKnown RBP14.96□□□□□ -0.01
LCA5L-221ENST00000495240 OTUD5Q96G74 571 aa14.95□□□□□ -0.02
LCA5L-221ENST00000495240 MS4A3Q96HJ5 214 aa14.94□□□□□ -0.02
LCA5L-221ENST00000495240 ASTLQ6HA08 431 aaPredicted RBP14.9□□□□□ -0.02
LCA5L-221ENST00000495240 TSPYL2Q9H2G4 693 aaPredicted RBP14.89□□□□□ -0.03
LCA5L-221ENST00000495240 ATMINO43313 823 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms