RNA–Protein interactions for RNA: ENST00000495198.6

SREK1IP1-201, Transcript of SREK1 interacting protein 1, humanhuman

TSL 3

Gene SREK1IP1, Length 816 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1-201ENST00000495198 AEBP2Q6ZN18 517 aaPredicted RBP38.29■■■■□ 3.72
SREK1IP1-201ENST00000495198 CHIC1Q5VXU3 224 aa35.94■■■■□ 3.34
SREK1IP1-201ENST00000495198 SENP3Q9H4L4 574 aaPredicted RBP32.42■■■□□ 2.78
SREK1IP1-201ENST00000495198 PHF23Q9BUL5 403 aaPredicted RBP32.05■■■□□ 2.72
SREK1IP1-201ENST00000495198 FOXD1Q16676 465 aa30.43■■■□□ 2.46
SREK1IP1-201ENST00000495198 PLPPR3Q6T4P5 718 aa28.45■■■□□ 2.14
SREK1IP1-201ENST00000495198 MSH5O43196 834 aa28.36■■■□□ 2.13
SREK1IP1-201ENST00000495198 POTEDQ86YR6 584 aa28.34■■■□□ 2.13
SREK1IP1-201ENST00000495198 PPP6R1Q9UPN7 881 aa28.33■■■□□ 2.13
SREK1IP1-201ENST00000495198 PIAS4Q8N2W9 510 aaPredicted RBP28.25■■■□□ 2.11
SREK1IP1-201ENST00000495198 ADRA2BP18089 450 aa28.15■■■□□ 2.1
SREK1IP1-201ENST00000495198 MAPK8IP2Q13387 824 aaPredicted RBP25.98■■□□□ 1.75
SREK1IP1-201ENST00000495198 DMRT2Q9Y5R5 561 aa25.75■■□□□ 1.71
SREK1IP1-201ENST00000495198 SCAF1Q9H7N4 1312 aaKnown RBP25.42■■□□□ 1.66
SREK1IP1-201ENST00000495198 PPP4R3CPQ6ZMV5 832 aa25■■□□□ 1.59
SREK1IP1-201ENST00000495198 HOXD11P31277 338 aaPredicted RBP24.71■■□□□ 1.55
SREK1IP1-201ENST00000495198 DCAF8L1A6NGE4 600 aa24.58■■□□□ 1.53
SREK1IP1-201ENST00000495198 CACNB1Q02641 598 aaPredicted RBP24.52■■□□□ 1.52
SREK1IP1-201ENST00000495198 CNKSR2Q8WXI2 1034 aa24.51■■□□□ 1.51
SREK1IP1-201ENST00000495198 RNF216Q9NWF9 866 aaPredicted RBP24.38■■□□□ 1.49
SREK1IP1-201ENST00000495198 RNF39Q9H2S5 420 aa24.32■■□□□ 1.48
SREK1IP1-201ENST00000495198 C1QBPQ07021 282 aaKnown RBP23.82■■□□□ 1.4
SREK1IP1-201ENST00000495198 DNAJC5BQ9UF47 199 aa23.8■■□□□ 1.4
SREK1IP1-201ENST00000495198 NCBP3Q53F19 620 aaKnown RBP23.75■■□□□ 1.39
SREK1IP1-201ENST00000495198 NPM3O75607 178 aaKnown RBP23.66■■□□□ 1.38
SREK1IP1-201ENST00000495198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.41■■□□□ 1.34
SREK1IP1-201ENST00000495198 U3KPZ7 1027 aaPredicted RBP23.07■■□□□ 1.28
SREK1IP1-201ENST00000495198 KCNA4P22459 653 aa23.01■■□□□ 1.27
SREK1IP1-201ENST00000495198 SPINK5Q9NQ38 1064 aaPredicted RBP22.84■■□□□ 1.25
SREK1IP1-201ENST00000495198 SLC4A2P04920 1241 aa22.75■■□□□ 1.23
SREK1IP1-201ENST00000495198 DSG3P32926 999 aa22.69■■□□□ 1.22
SREK1IP1-201ENST00000495198 CAPN15O75808 1086 aa22.63■■□□□ 1.21
SREK1IP1-201ENST00000495198 TRHP20396 242 aaPredicted RBP22.22■■□□□ 1.15
SREK1IP1-201ENST00000495198 ABCB7O75027 752 aa22.2■■□□□ 1.14
SREK1IP1-201ENST00000495198 ZNF219Q9P2Y4 722 aaPredicted RBP22.1■■□□□ 1.13
SREK1IP1-201ENST00000495198 POTEHQ6S545 545 aa22.09■■□□□ 1.13
SREK1IP1-201ENST00000495198 APLP2Q06481 763 aa22.01■■□□□ 1.11
SREK1IP1-201ENST00000495198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22■■□□□ 1.11
SREK1IP1-201ENST00000495198 HNRNPUL2Q1KMD3 747 aaKnown RBP22■■□□□ 1.11
SREK1IP1-201ENST00000495198 SAMD1Q6SPF0 538 aaPredicted RBP21.95■■□□□ 1.1
SREK1IP1-201ENST00000495198 MYCNP04198 464 aaPredicted RBP21.76■■□□□ 1.07
SREK1IP1-201ENST00000495198 POLA2Q14181 598 aa21.59■■□□□ 1.05
SREK1IP1-201ENST00000495198 SLC4A1APQ9BWU0 796 aaKnown RBP21.53■■□□□ 1.04
SREK1IP1-201ENST00000495198 ATF5Q9Y2D1 282 aaPredicted RBP21.53■■□□□ 1.04
SREK1IP1-201ENST00000495198 RBM42Q9BTD8 480 aaKnown RBP21.43■■□□□ 1.02
SREK1IP1-201ENST00000495198 FOXD4L1Q9NU39 408 aa21.43■■□□□ 1.02
SREK1IP1-201ENST00000495198 ZBTB22O15209 634 aa21.27■■□□□ 1
SREK1IP1-201ENST00000495198 CHRDL2Q6WN34 429 aa21.22■□□□□ 0.99
SREK1IP1-201ENST00000495198 OSCARQ8IYS5 282 aa20.99■□□□□ 0.95
SREK1IP1-201ENST00000495198 AKT1S1Q96B36 256 aa20.98■□□□□ 0.95
SREK1IP1-201ENST00000495198 ZBTB12Q9Y330 459 aaPredicted RBP20.96■□□□□ 0.95
SREK1IP1-201ENST00000495198 REM2Q8IYK8 340 aaPredicted RBP20.86■□□□□ 0.93
SREK1IP1-201ENST00000495198 PIP4P2Q8N4L2 257 aa20.73■□□□□ 0.91
SREK1IP1-201ENST00000495198 ATXN8OSP0DMR3 200 aa20.72■□□□□ 0.91
SREK1IP1-201ENST00000495198 PITPNM1O00562 1244 aa20.69■□□□□ 0.9
SREK1IP1-201ENST00000495198 SP7Q8TDD2 431 aaPredicted RBP20.56■□□□□ 0.88
SREK1IP1-201ENST00000495198 FXR2P51116 673 aaKnown RBP eCLIP20.55■□□□□ 0.88
SREK1IP1-201ENST00000495198 MKRN4PQ13434 485 aaPredicted RBP20.5■□□□□ 0.87
SREK1IP1-201ENST00000495198 SPDYE2BA6NHP3 402 aa20.4■□□□□ 0.86
SREK1IP1-201ENST00000495198 SPDYE6P0CI01 402 aa20.4■□□□□ 0.86
SREK1IP1-201ENST00000495198 SPDYE2Q495Y8 402 aa20.4■□□□□ 0.86
SREK1IP1-201ENST00000495198 FBLN2P98095 1184 aa20.36■□□□□ 0.85
SREK1IP1-201ENST00000495198 HAX1O00165 279 aa20.28■□□□□ 0.84
SREK1IP1-201ENST00000495198 EVX2Q03828 476 aa20.28■□□□□ 0.84
SREK1IP1-201ENST00000495198 SSUH2Q9Y2M2 353 aa20.22■□□□□ 0.83
SREK1IP1-201ENST00000495198 ZNF692Q9BU19 519 aaPredicted RBP20.09■□□□□ 0.81
SREK1IP1-201ENST00000495198 SPDYE1Q8NFV5 336 aaPredicted RBP20.08■□□□□ 0.81
SREK1IP1-201ENST00000495198 CLEC11AQ9Y240 323 aa20.08■□□□□ 0.81
SREK1IP1-201ENST00000495198 PRKAR2AP13861 404 aaKnown RBP20.07■□□□□ 0.8
SREK1IP1-201ENST00000495198 CSRNP3Q8WYN3 585 aa19.93■□□□□ 0.78
SREK1IP1-201ENST00000495198 C19orf67A6NJJ6 358 aa19.9■□□□□ 0.78
SREK1IP1-201ENST00000495198 CHADLQ6NUI6 762 aa19.87■□□□□ 0.77
SREK1IP1-201ENST00000495198 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
SREK1IP1-201ENST00000495198 PRR29P0C7W0 189 aa19.68■□□□□ 0.74
SREK1IP1-201ENST00000495198 GABBR2O75899 941 aa19.66■□□□□ 0.74
SREK1IP1-201ENST00000495198 FARP1Q9Y4F1 1045 aaPredicted RBP19.48■□□□□ 0.71
SREK1IP1-201ENST00000495198 EHMT2Q96KQ7 1210 aa19.44■□□□□ 0.7
SREK1IP1-201ENST00000495198 CD44P16070 742 aaKnown RBP19.41■□□□□ 0.7
SREK1IP1-201ENST00000495198 POTEIP0CG38 1075 aa19.38■□□□□ 0.69
SREK1IP1-201ENST00000495198 CREBZFQ9NS37 354 aa19.31■□□□□ 0.68
SREK1IP1-201ENST00000495198 LHX8Q68G74 356 aa19.26■□□□□ 0.67
SREK1IP1-201ENST00000495198 SPDYE4A6NLX3 237 aa19.2■□□□□ 0.66
SREK1IP1-201ENST00000495198 ZNF579Q8NAF0 562 aaKnown RBP19.14■□□□□ 0.65
SREK1IP1-201ENST00000495198 STAG3Q9UJ98 1225 aa19.09■□□□□ 0.65
SREK1IP1-201ENST00000495198 ZRANB1Q9UGI0 708 aa19.08■□□□□ 0.64
SREK1IP1-201ENST00000495198 MNX1P50219 401 aaPredicted RBP19.02■□□□□ 0.64
SREK1IP1-201ENST00000495198 CLCN6P51797 869 aa19■□□□□ 0.63
SREK1IP1-201ENST00000495198 GALR2O43603 387 aaPredicted RBP18.99■□□□□ 0.63
SREK1IP1-201ENST00000495198 DCBLD2Q96PD2 775 aa18.91■□□□□ 0.62
SREK1IP1-201ENST00000495198 PHF12Q96QT6 1004 aa18.91■□□□□ 0.62
SREK1IP1-201ENST00000495198 PROM2Q8N271 834 aa18.85■□□□□ 0.61
SREK1IP1-201ENST00000495198 POTEB2H3BUK9 544 aa18.75■□□□□ 0.59
SREK1IP1-201ENST00000495198 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
SREK1IP1-201ENST00000495198 NPM1P06748 294 aaKnown RBP eCLIP18.7■□□□□ 0.58
SREK1IP1-201ENST00000495198 PAK3O75914 559 aaPredicted RBP18.68■□□□□ 0.58
SREK1IP1-201ENST00000495198 OTUD5Q96G74 571 aa18.65■□□□□ 0.58
SREK1IP1-201ENST00000495198 MS4A3Q96HJ5 214 aa18.63■□□□□ 0.57
SREK1IP1-201ENST00000495198 ASTLQ6HA08 431 aaPredicted RBP18.52■□□□□ 0.56
SREK1IP1-201ENST00000495198 CCDC61Q9Y6R9 512 aa18.51■□□□□ 0.55
SREK1IP1-201ENST00000495198 ATMINO43313 823 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms