RNA–Protein interactions for RNA: ENST00000494972.1

SPO11-205, Transcript of SPO11, initiator of meiotic double stranded breaks, humanhuman

TSL 3

Gene SPO11, Length 1,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPO11-205ENST00000494972 AEBP2Q6ZN18 517 aaPredicted RBP31.94■■■□□ 2.7
SPO11-205ENST00000494972 CHIC1Q5VXU3 224 aa30.06■■■□□ 2.4
SPO11-205ENST00000494972 SENP3Q9H4L4 574 aaPredicted RBP27.31■■□□□ 1.96
SPO11-205ENST00000494972 PHF23Q9BUL5 403 aaPredicted RBP26.92■■□□□ 1.9
SPO11-205ENST00000494972 FOXD1Q16676 465 aa25.48■■□□□ 1.67
SPO11-205ENST00000494972 MSH5O43196 834 aa23.97■■□□□ 1.43
SPO11-205ENST00000494972 PLPPR3Q6T4P5 718 aa23.9■■□□□ 1.42
SPO11-205ENST00000494972 POTEDQ86YR6 584 aa23.87■■□□□ 1.41
SPO11-205ENST00000494972 PIAS4Q8N2W9 510 aaPredicted RBP23.76■■□□□ 1.39
SPO11-205ENST00000494972 PPP6R1Q9UPN7 881 aa23.61■■□□□ 1.37
SPO11-205ENST00000494972 ADRA2BP18089 450 aa23.53■■□□□ 1.36
SPO11-205ENST00000494972 MAPK8IP2Q13387 824 aaPredicted RBP21.71■■□□□ 1.07
SPO11-205ENST00000494972 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
SPO11-205ENST00000494972 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
SPO11-205ENST00000494972 PPP4R3CPQ6ZMV5 832 aa20.91■□□□□ 0.94
SPO11-205ENST00000494972 DCAF8L1A6NGE4 600 aa20.78■□□□□ 0.92
SPO11-205ENST00000494972 CACNB1Q02641 598 aaPredicted RBP20.77■□□□□ 0.92
SPO11-205ENST00000494972 HOXD11P31277 338 aaPredicted RBP20.69■□□□□ 0.9
SPO11-205ENST00000494972 CNKSR2Q8WXI2 1034 aa20.58■□□□□ 0.89
SPO11-205ENST00000494972 RNF216Q9NWF9 866 aaPredicted RBP20.47■□□□□ 0.87
SPO11-205ENST00000494972 RNF39Q9H2S5 420 aa20.42■□□□□ 0.86
SPO11-205ENST00000494972 C1QBPQ07021 282 aaKnown RBP20.12■□□□□ 0.81
SPO11-205ENST00000494972 NCBP3Q53F19 620 aaKnown RBP20.04■□□□□ 0.8
SPO11-205ENST00000494972 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
SPO11-205ENST00000494972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.76■□□□□ 0.75
SPO11-205ENST00000494972 NPM3O75607 178 aaKnown RBP19.73■□□□□ 0.75
SPO11-205ENST00000494972 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
SPO11-205ENST00000494972 CAPN15O75808 1086 aa19.1■□□□□ 0.65
SPO11-205ENST00000494972 KCNA4P22459 653 aa19.09■□□□□ 0.65
SPO11-205ENST00000494972 SPINK5Q9NQ38 1064 aaPredicted RBP19.09■□□□□ 0.65
SPO11-205ENST00000494972 DSG3P32926 999 aa19.02■□□□□ 0.64
SPO11-205ENST00000494972 SLC4A2P04920 1241 aa18.91■□□□□ 0.62
SPO11-205ENST00000494972 APLP2Q06481 763 aa18.73■□□□□ 0.59
SPO11-205ENST00000494972 TRHP20396 242 aaPredicted RBP18.72■□□□□ 0.59
SPO11-205ENST00000494972 POTEHQ6S545 545 aa18.66■□□□□ 0.58
SPO11-205ENST00000494972 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
SPO11-205ENST00000494972 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
SPO11-205ENST00000494972 ZNF219Q9P2Y4 722 aaPredicted RBP18.65■□□□□ 0.58
SPO11-205ENST00000494972 ABCB7O75027 752 aa18.62■□□□□ 0.57
SPO11-205ENST00000494972 SAMD1Q6SPF0 538 aaPredicted RBP18.53■□□□□ 0.56
SPO11-205ENST00000494972 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
SPO11-205ENST00000494972 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
SPO11-205ENST00000494972 POLA2Q14181 598 aa18.16■□□□□ 0.5
SPO11-205ENST00000494972 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
SPO11-205ENST00000494972 FOXD4L1Q9NU39 408 aa17.91■□□□□ 0.46
SPO11-205ENST00000494972 CHRDL2Q6WN34 429 aa17.89■□□□□ 0.45
SPO11-205ENST00000494972 ATF5Q9Y2D1 282 aaPredicted RBP17.85■□□□□ 0.45
SPO11-205ENST00000494972 ZBTB12Q9Y330 459 aaPredicted RBP17.75■□□□□ 0.43
SPO11-205ENST00000494972 AKT1S1Q96B36 256 aa17.69■□□□□ 0.42
SPO11-205ENST00000494972 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
SPO11-205ENST00000494972 ZBTB22O15209 634 aa17.54■□□□□ 0.4
SPO11-205ENST00000494972 REM2Q8IYK8 340 aaPredicted RBP17.53■□□□□ 0.4
SPO11-205ENST00000494972 ATXN8OSP0DMR3 200 aa17.39■□□□□ 0.37
SPO11-205ENST00000494972 PIP4P2Q8N4L2 257 aa17.39■□□□□ 0.37
SPO11-205ENST00000494972 SP7Q8TDD2 431 aaPredicted RBP17.36■□□□□ 0.37
SPO11-205ENST00000494972 PITPNM1O00562 1244 aa17.34■□□□□ 0.37
SPO11-205ENST00000494972 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
SPO11-205ENST00000494972 FBLN2P98095 1184 aa17.2■□□□□ 0.34
SPO11-205ENST00000494972 HAX1O00165 279 aa17.19■□□□□ 0.34
SPO11-205ENST00000494972 SPDYE2BA6NHP3 402 aa17.17■□□□□ 0.34
SPO11-205ENST00000494972 SPDYE6P0CI01 402 aa17.17■□□□□ 0.34
SPO11-205ENST00000494972 SPDYE2Q495Y8 402 aa17.17■□□□□ 0.34
SPO11-205ENST00000494972 MKRN4PQ13434 485 aaPredicted RBP17.01■□□□□ 0.31
SPO11-205ENST00000494972 CLEC11AQ9Y240 323 aa16.96■□□□□ 0.31
SPO11-205ENST00000494972 SPDYE1Q8NFV5 336 aaPredicted RBP16.95■□□□□ 0.3
SPO11-205ENST00000494972 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
SPO11-205ENST00000494972 EVX2Q03828 476 aa16.92■□□□□ 0.3
SPO11-205ENST00000494972 PRKAR2AP13861 404 aaKnown RBP16.9■□□□□ 0.3
SPO11-205ENST00000494972 SSUH2Q9Y2M2 353 aa16.89■□□□□ 0.29
SPO11-205ENST00000494972 C19orf67A6NJJ6 358 aa16.7■□□□□ 0.26
SPO11-205ENST00000494972 PABPN1Q86U42 306 aaKnown RBP eCLIP16.67■□□□□ 0.26
SPO11-205ENST00000494972 CHADLQ6NUI6 762 aa16.64■□□□□ 0.25
SPO11-205ENST00000494972 PRR29P0C7W0 189 aa16.63■□□□□ 0.25
SPO11-205ENST00000494972 GABBR2O75899 941 aa16.54■□□□□ 0.24
SPO11-205ENST00000494972 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
SPO11-205ENST00000494972 FARP1Q9Y4F1 1045 aaPredicted RBP16.38■□□□□ 0.21
SPO11-205ENST00000494972 CD44P16070 742 aaKnown RBP16.35■□□□□ 0.21
SPO11-205ENST00000494972 LHX8Q68G74 356 aa16.29■□□□□ 0.2
SPO11-205ENST00000494972 CLCN6P51797 869 aa16.18■□□□□ 0.18
SPO11-205ENST00000494972 POTEIP0CG38 1075 aa16.17■□□□□ 0.18
SPO11-205ENST00000494972 STAG3Q9UJ98 1225 aa16.16■□□□□ 0.18
SPO11-205ENST00000494972 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
SPO11-205ENST00000494972 CREBZFQ9NS37 354 aa16.13■□□□□ 0.17
SPO11-205ENST00000494972 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
SPO11-205ENST00000494972 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.16
SPO11-205ENST00000494972 ZNF579Q8NAF0 562 aaKnown RBP16.06■□□□□ 0.16
SPO11-205ENST00000494972 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
SPO11-205ENST00000494972 GALR2O43603 387 aaPredicted RBP15.89■□□□□ 0.13
SPO11-205ENST00000494972 PAK3O75914 559 aaPredicted RBP15.89■□□□□ 0.13
SPO11-205ENST00000494972 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
SPO11-205ENST00000494972 PHF12Q96QT6 1004 aa15.83■□□□□ 0.12
SPO11-205ENST00000494972 MNX1P50219 401 aaPredicted RBP15.8■□□□□ 0.12
SPO11-205ENST00000494972 OTUD5Q96G74 571 aa15.64■□□□□ 0.09
SPO11-205ENST00000494972 POTEB2H3BUK9 544 aa15.63■□□□□ 0.09
SPO11-205ENST00000494972 PELP1Q8IZL8 1130 aaKnown RBP15.62■□□□□ 0.09
SPO11-205ENST00000494972 PROM2Q8N271 834 aa15.61■□□□□ 0.09
SPO11-205ENST00000494972 MS4A3Q96HJ5 214 aa15.58■□□□□ 0.08
SPO11-205ENST00000494972 TSPYL2Q9H2G4 693 aaPredicted RBP15.55■□□□□ 0.08
SPO11-205ENST00000494972 ASTLQ6HA08 431 aaPredicted RBP15.54■□□□□ 0.08
SPO11-205ENST00000494972 ATMINO43313 823 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms