RNA–Protein interactions for RNA: ENST00000494508.1

SP100-218, Transcript of SP100 nuclear antigen, humanhuman

TSL 2

Gene SP100, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP100-218ENST00000494508 AEBP2Q6ZN18 517 aaPredicted RBP22.37■■□□□ 1.17
SP100-218ENST00000494508 CHIC1Q5VXU3 224 aa21.87■■□□□ 1.09
SP100-218ENST00000494508 PHF23Q9BUL5 403 aaPredicted RBP19.18■□□□□ 0.66
SP100-218ENST00000494508 SENP3Q9H4L4 574 aaPredicted RBP19.08■□□□□ 0.64
SP100-218ENST00000494508 PLPPR3Q6T4P5 718 aa17.78■□□□□ 0.44
SP100-218ENST00000494508 FOXD1Q16676 465 aa17.66■□□□□ 0.42
SP100-218ENST00000494508 PPP6R1Q9UPN7 881 aa16.94■□□□□ 0.3
SP100-218ENST00000494508 ADRA2BP18089 450 aa16.93■□□□□ 0.3
SP100-218ENST00000494508 PIAS4Q8N2W9 510 aaPredicted RBP16.66■□□□□ 0.26
SP100-218ENST00000494508 MSH5O43196 834 aa16.36■□□□□ 0.21
SP100-218ENST00000494508 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
SP100-218ENST00000494508 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
SP100-218ENST00000494508 SCAF1Q9H7N4 1312 aaKnown RBP15.61■□□□□ 0.09
SP100-218ENST00000494508 MAPK8IP2Q13387 824 aaPredicted RBP15.37■□□□□ 0.05
SP100-218ENST00000494508 NCBP3Q53F19 620 aaKnown RBP15.27■□□□□ 0.04
SP100-218ENST00000494508 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
SP100-218ENST00000494508 DMRT2Q9Y5R5 561 aa15.2■□□□□ 0.02
SP100-218ENST00000494508 KCNA4P22459 653 aa15.18■□□□□ 0.02
SP100-218ENST00000494508 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
SP100-218ENST00000494508 NPM3O75607 178 aaKnown RBP14.97□□□□□ -0.01
SP100-218ENST00000494508 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
SP100-218ENST00000494508 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
SP100-218ENST00000494508 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
SP100-218ENST00000494508 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
SP100-218ENST00000494508 SLC4A1APQ9BWU0 796 aaKnown RBP14.49□□□□□ -0.09
SP100-218ENST00000494508 CSRNP3Q8WYN3 585 aa14.37□□□□□ -0.11
SP100-218ENST00000494508 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.14
SP100-218ENST00000494508 SLC4A2P04920 1241 aa14.13□□□□□ -0.15
SP100-218ENST00000494508 FOXD4L1Q9NU39 408 aa14.02□□□□□ -0.17
SP100-218ENST00000494508 RNF39Q9H2S5 420 aa13.98□□□□□ -0.17
SP100-218ENST00000494508 ZBTB22O15209 634 aa13.93□□□□□ -0.18
SP100-218ENST00000494508 U3KPZ7 1027 aaPredicted RBP13.91□□□□□ -0.18
SP100-218ENST00000494508 MYCNP04198 464 aaPredicted RBP13.87□□□□□ -0.19
SP100-218ENST00000494508 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
SP100-218ENST00000494508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
SP100-218ENST00000494508 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
SP100-218ENST00000494508 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
SP100-218ENST00000494508 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
SP100-218ENST00000494508 APLP2Q06481 763 aa13.7□□□□□ -0.22
SP100-218ENST00000494508 ATXN8OSP0DMR3 200 aa13.59□□□□□ -0.23
SP100-218ENST00000494508 SPINK5Q9NQ38 1064 aaPredicted RBP13.52□□□□□ -0.25
SP100-218ENST00000494508 CAPN15O75808 1086 aa13.51□□□□□ -0.25
SP100-218ENST00000494508 ZNF219Q9P2Y4 722 aaPredicted RBP13.46□□□□□ -0.25
SP100-218ENST00000494508 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
SP100-218ENST00000494508 ATF5Q9Y2D1 282 aaPredicted RBP13.43□□□□□ -0.26
SP100-218ENST00000494508 SLC24A1O60721 1099 aa13.39□□□□□ -0.27
SP100-218ENST00000494508 RTN4Q9NQC3 1192 aaKnown RBP13.31□□□□□ -0.28
SP100-218ENST00000494508 DSG3P32926 999 aa13.28□□□□□ -0.28
SP100-218ENST00000494508 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
SP100-218ENST00000494508 POLA2Q14181 598 aa13.22□□□□□ -0.29
SP100-218ENST00000494508 ABCB7O75027 752 aa13.21□□□□□ -0.29
SP100-218ENST00000494508 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
SP100-218ENST00000494508 FKBP8Q14318 412 aa13.04□□□□□ -0.32
SP100-218ENST00000494508 FBLN2P98095 1184 aa12.97□□□□□ -0.33
SP100-218ENST00000494508 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
SP100-218ENST00000494508 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
SP100-218ENST00000494508 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
SP100-218ENST00000494508 SPDYE2BA6NHP3 402 aa12.66□□□□□ -0.38
SP100-218ENST00000494508 SPDYE6P0CI01 402 aa12.66□□□□□ -0.38
SP100-218ENST00000494508 SPDYE2Q495Y8 402 aa12.66□□□□□ -0.38
SP100-218ENST00000494508 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
SP100-218ENST00000494508 ZNF692Q9BU19 519 aaPredicted RBP12.6□□□□□ -0.39
SP100-218ENST00000494508 POTEHQ6S545 545 aa12.55□□□□□ -0.4
SP100-218ENST00000494508 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
SP100-218ENST00000494508 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
SP100-218ENST00000494508 PABPN1Q86U42 306 aaKnown RBP eCLIP12.42□□□□□ -0.42
SP100-218ENST00000494508 REM2Q8IYK8 340 aaPredicted RBP12.39□□□□□ -0.43
SP100-218ENST00000494508 PROM2Q8N271 834 aa12.36□□□□□ -0.43
SP100-218ENST00000494508 SPDYE1Q8NFV5 336 aaPredicted RBP12.3□□□□□ -0.44
SP100-218ENST00000494508 STAG3Q9UJ98 1225 aa12.27□□□□□ -0.45
SP100-218ENST00000494508 FBXO3Q9UK99 471 aa12.27□□□□□ -0.45
SP100-218ENST00000494508 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
SP100-218ENST00000494508 CLEC11AQ9Y240 323 aa12.23□□□□□ -0.45
SP100-218ENST00000494508 PITPNM1O00562 1244 aa12.22□□□□□ -0.45
SP100-218ENST00000494508 PLCB2Q00722 1185 aa12.22□□□□□ -0.45
SP100-218ENST00000494508 HAP1P54257 671 aaPredicted RBP12.2□□□□□ -0.46
SP100-218ENST00000494508 CHRDL2Q6WN34 429 aa12.16□□□□□ -0.46
SP100-218ENST00000494508 PRR29P0C7W0 189 aa12.14□□□□□ -0.47
SP100-218ENST00000494508 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
SP100-218ENST00000494508 FXR2P51116 673 aaKnown RBP eCLIP12.03□□□□□ -0.48
SP100-218ENST00000494508 BCANQ96GW7 911 aa11.99□□□□□ -0.49
SP100-218ENST00000494508 MIER1Q8N108 512 aa11.98□□□□□ -0.49
SP100-218ENST00000494508 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
SP100-218ENST00000494508 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
SP100-218ENST00000494508 IFNLR1Q8IU57 520 aaPredicted RBP11.97□□□□□ -0.49
SP100-218ENST00000494508 PRKCSHP14314 528 aaPredicted RBP11.95□□□□□ -0.5
SP100-218ENST00000494508 PLCD3Q8N3E9 789 aa11.95□□□□□ -0.5
SP100-218ENST00000494508 PRKAR2AP13861 404 aaKnown RBP11.94□□□□□ -0.5
SP100-218ENST00000494508 CREBZFQ9NS37 354 aa11.92□□□□□ -0.5
SP100-218ENST00000494508 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
SP100-218ENST00000494508 VSIG10Q8N0Z9 540 aa11.88□□□□□ -0.51
SP100-218ENST00000494508 PKD2Q13563 968 aa11.87□□□□□ -0.51
SP100-218ENST00000494508 ZBTB47Q9UFB7 747 aaPredicted RBP11.86□□□□□ -0.51
SP100-218ENST00000494508 TAOK2Q9UL54 1235 aa11.84□□□□□ -0.51
SP100-218ENST00000494508 KLHL34Q8N239 644 aa11.83□□□□□ -0.52
SP100-218ENST00000494508 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
SP100-218ENST00000494508 FARP1Q9Y4F1 1045 aaPredicted RBP11.82□□□□□ -0.52
SP100-218ENST00000494508 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
SP100-218ENST00000494508 MNX1P50219 401 aaPredicted RBP11.79□□□□□ -0.52
SP100-218ENST00000494508 CFAP44Q96MT7 982 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms