RNA–Protein interactions for RNA: ENST00000494189.1

PPP1R1C-211, Transcript of protein phosphatase 1 regulatory inhibitor subunit 1C, humanhuman

TSL 1 (best)

Gene PPP1R1C, Length 933 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R1C-211ENST00000494189 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
PPP1R1C-211ENST00000494189 CHIC1Q5VXU3 224 aa27.18■■□□□ 1.94
PPP1R1C-211ENST00000494189 SENP3Q9H4L4 574 aaPredicted RBP24.45■■□□□ 1.5
PPP1R1C-211ENST00000494189 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.45
PPP1R1C-211ENST00000494189 FOXD1Q16676 465 aa22.68■■□□□ 1.22
PPP1R1C-211ENST00000494189 PLPPR3Q6T4P5 718 aa21.8■■□□□ 1.08
PPP1R1C-211ENST00000494189 POTEDQ86YR6 584 aa21.51■■□□□ 1.03
PPP1R1C-211ENST00000494189 MSH5O43196 834 aa21.34■■□□□ 1.01
PPP1R1C-211ENST00000494189 PIAS4Q8N2W9 510 aaPredicted RBP21.24■□□□□ 0.99
PPP1R1C-211ENST00000494189 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
PPP1R1C-211ENST00000494189 ADRA2BP18089 450 aa21.14■□□□□ 0.97
PPP1R1C-211ENST00000494189 SCAF1Q9H7N4 1312 aaKnown RBP19.55■□□□□ 0.72
PPP1R1C-211ENST00000494189 MAPK8IP2Q13387 824 aaPredicted RBP19.39■□□□□ 0.69
PPP1R1C-211ENST00000494189 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
PPP1R1C-211ENST00000494189 PPP4R3CPQ6ZMV5 832 aa19.06■□□□□ 0.64
PPP1R1C-211ENST00000494189 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
PPP1R1C-211ENST00000494189 HOXD11P31277 338 aaPredicted RBP18.66■□□□□ 0.58
PPP1R1C-211ENST00000494189 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
PPP1R1C-211ENST00000494189 DCAF8L1A6NGE4 600 aa18.54■□□□□ 0.56
PPP1R1C-211ENST00000494189 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
PPP1R1C-211ENST00000494189 CACNB1Q02641 598 aaPredicted RBP18.33■□□□□ 0.52
PPP1R1C-211ENST00000494189 RNF39Q9H2S5 420 aa18.14■□□□□ 0.49
PPP1R1C-211ENST00000494189 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
PPP1R1C-211ENST00000494189 NPM3O75607 178 aaKnown RBP18.04■□□□□ 0.48
PPP1R1C-211ENST00000494189 C1QBPQ07021 282 aaKnown RBP17.96■□□□□ 0.47
PPP1R1C-211ENST00000494189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.8■□□□□ 0.44
PPP1R1C-211ENST00000494189 KCNA4P22459 653 aa17.69■□□□□ 0.42
PPP1R1C-211ENST00000494189 U3KPZ7 1027 aaPredicted RBP17.35■□□□□ 0.37
PPP1R1C-211ENST00000494189 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
PPP1R1C-211ENST00000494189 CAPN15O75808 1086 aa17.11■□□□□ 0.33
PPP1R1C-211ENST00000494189 APLP2Q06481 763 aa17.08■□□□□ 0.32
PPP1R1C-211ENST00000494189 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
PPP1R1C-211ENST00000494189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
PPP1R1C-211ENST00000494189 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
PPP1R1C-211ENST00000494189 DSG3P32926 999 aa16.99■□□□□ 0.31
PPP1R1C-211ENST00000494189 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
PPP1R1C-211ENST00000494189 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
PPP1R1C-211ENST00000494189 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
PPP1R1C-211ENST00000494189 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.28
PPP1R1C-211ENST00000494189 MYCNP04198 464 aaPredicted RBP16.76■□□□□ 0.27
PPP1R1C-211ENST00000494189 POTEHQ6S545 545 aa16.73■□□□□ 0.27
PPP1R1C-211ENST00000494189 ABCB7O75027 752 aa16.65■□□□□ 0.26
PPP1R1C-211ENST00000494189 FOXD4L1Q9NU39 408 aa16.57■□□□□ 0.24
PPP1R1C-211ENST00000494189 POLA2Q14181 598 aa16.41■□□□□ 0.22
PPP1R1C-211ENST00000494189 RBM42Q9BTD8 480 aaKnown RBP16.32■□□□□ 0.2
PPP1R1C-211ENST00000494189 ATF5Q9Y2D1 282 aaPredicted RBP16.23■□□□□ 0.19
PPP1R1C-211ENST00000494189 ZBTB22O15209 634 aa16.2■□□□□ 0.18
PPP1R1C-211ENST00000494189 ZBTB12Q9Y330 459 aaPredicted RBP16.19■□□□□ 0.18
PPP1R1C-211ENST00000494189 ATXN8OSP0DMR3 200 aa16.15■□□□□ 0.18
PPP1R1C-211ENST00000494189 AKT1S1Q96B36 256 aa15.92■□□□□ 0.14
PPP1R1C-211ENST00000494189 CHRDL2Q6WN34 429 aa15.86■□□□□ 0.13
PPP1R1C-211ENST00000494189 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
PPP1R1C-211ENST00000494189 FBLN2P98095 1184 aa15.77■□□□□ 0.12
PPP1R1C-211ENST00000494189 REM2Q8IYK8 340 aaPredicted RBP15.71■□□□□ 0.11
PPP1R1C-211ENST00000494189 SPDYE2BA6NHP3 402 aa15.64■□□□□ 0.09
PPP1R1C-211ENST00000494189 SPDYE6P0CI01 402 aa15.64■□□□□ 0.09
PPP1R1C-211ENST00000494189 SPDYE2Q495Y8 402 aa15.64■□□□□ 0.09
PPP1R1C-211ENST00000494189 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
PPP1R1C-211ENST00000494189 PITPNM1O00562 1244 aa15.5■□□□□ 0.07
PPP1R1C-211ENST00000494189 MKRN4PQ13434 485 aaPredicted RBP15.5■□□□□ 0.07
PPP1R1C-211ENST00000494189 PIP4P2Q8N4L2 257 aa15.46■□□□□ 0.07
PPP1R1C-211ENST00000494189 ZNF692Q9BU19 519 aaPredicted RBP15.44■□□□□ 0.06
PPP1R1C-211ENST00000494189 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
PPP1R1C-211ENST00000494189 SPDYE1Q8NFV5 336 aaPredicted RBP15.37■□□□□ 0.05
PPP1R1C-211ENST00000494189 SSUH2Q9Y2M2 353 aa15.37■□□□□ 0.05
PPP1R1C-211ENST00000494189 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
PPP1R1C-211ENST00000494189 SP7Q8TDD2 431 aaPredicted RBP15.33■□□□□ 0.04
PPP1R1C-211ENST00000494189 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
PPP1R1C-211ENST00000494189 HAX1O00165 279 aa15.23■□□□□ 0.03
PPP1R1C-211ENST00000494189 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
PPP1R1C-211ENST00000494189 PRKAR2AP13861 404 aaKnown RBP15.15■□□□□ 0.02
PPP1R1C-211ENST00000494189 PRR29P0C7W0 189 aa15.08■□□□□ 0
PPP1R1C-211ENST00000494189 C19orf67A6NJJ6 358 aa14.91□□□□□ -0.02
PPP1R1C-211ENST00000494189 EVX2Q03828 476 aa14.91□□□□□ -0.02
PPP1R1C-211ENST00000494189 CHADLQ6NUI6 762 aa14.91□□□□□ -0.02
PPP1R1C-211ENST00000494189 STAG3Q9UJ98 1225 aa14.89□□□□□ -0.03
PPP1R1C-211ENST00000494189 SPDYE4A6NLX3 237 aa14.88□□□□□ -0.03
PPP1R1C-211ENST00000494189 FARP1Q9Y4F1 1045 aaPredicted RBP14.77□□□□□ -0.05
PPP1R1C-211ENST00000494189 GABBR2O75899 941 aa14.67□□□□□ -0.06
PPP1R1C-211ENST00000494189 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
PPP1R1C-211ENST00000494189 CLCN6P51797 869 aa14.65□□□□□ -0.06
PPP1R1C-211ENST00000494189 CREBZFQ9NS37 354 aa14.63□□□□□ -0.07
PPP1R1C-211ENST00000494189 PROM2Q8N271 834 aa14.51□□□□□ -0.09
PPP1R1C-211ENST00000494189 NPM1P06748 294 aaKnown RBP eCLIP14.5□□□□□ -0.09
PPP1R1C-211ENST00000494189 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
PPP1R1C-211ENST00000494189 PAK3O75914 559 aaPredicted RBP14.45□□□□□ -0.1
PPP1R1C-211ENST00000494189 ZNF579Q8NAF0 562 aaKnown RBP14.45□□□□□ -0.1
PPP1R1C-211ENST00000494189 LHX8Q68G74 356 aa14.39□□□□□ -0.11
PPP1R1C-211ENST00000494189 MNX1P50219 401 aaPredicted RBP14.37□□□□□ -0.11
PPP1R1C-211ENST00000494189 DCBLD2Q96PD2 775 aa14.35□□□□□ -0.11
PPP1R1C-211ENST00000494189 PLEKHG5O94827 1062 aa14.32□□□□□ -0.12
PPP1R1C-211ENST00000494189 POTEIP0CG38 1075 aa14.29□□□□□ -0.12
PPP1R1C-211ENST00000494189 MIER1Q8N108 512 aa14.23□□□□□ -0.13
PPP1R1C-211ENST00000494189 GALR2O43603 387 aaPredicted RBP14.21□□□□□ -0.13
PPP1R1C-211ENST00000494189 PHF12Q96QT6 1004 aa14.19□□□□□ -0.14
PPP1R1C-211ENST00000494189 PLSCR2Q9NRY7 297 aa14.17□□□□□ -0.14
PPP1R1C-211ENST00000494189 FKBP8Q14318 412 aa14.13□□□□□ -0.15
PPP1R1C-211ENST00000494189 PLCD3Q8N3E9 789 aa14.12□□□□□ -0.15
PPP1R1C-211ENST00000494189 TSPYL2Q9H2G4 693 aaPredicted RBP14.12□□□□□ -0.15
PPP1R1C-211ENST00000494189 ZBTB47Q9UFB7 747 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms