RNA–Protein interactions for RNA: ENST00000494044.1

LPP-218, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5

Gene LPP, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-218ENST00000494044 AEBP2Q6ZN18 517 aaPredicted RBP23.66■■□□□ 1.38
LPP-218ENST00000494044 CHIC1Q5VXU3 224 aa22.74■■□□□ 1.23
LPP-218ENST00000494044 SENP3Q9H4L4 574 aaPredicted RBP20.16■□□□□ 0.82
LPP-218ENST00000494044 PHF23Q9BUL5 403 aaPredicted RBP19.97■□□□□ 0.79
LPP-218ENST00000494044 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
LPP-218ENST00000494044 FOXD1Q16676 465 aa18.76■□□□□ 0.59
LPP-218ENST00000494044 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
LPP-218ENST00000494044 PPP6R1Q9UPN7 881 aa17.75■□□□□ 0.43
LPP-218ENST00000494044 ADRA2BP18089 450 aa17.71■□□□□ 0.43
LPP-218ENST00000494044 PIAS4Q8N2W9 510 aaPredicted RBP17.58■□□□□ 0.4
LPP-218ENST00000494044 MSH5O43196 834 aa17.46■□□□□ 0.39
LPP-218ENST00000494044 SCAF1Q9H7N4 1312 aaKnown RBP16.25■□□□□ 0.19
LPP-218ENST00000494044 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
LPP-218ENST00000494044 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
LPP-218ENST00000494044 DMRT2Q9Y5R5 561 aa16.03■□□□□ 0.16
LPP-218ENST00000494044 CACNB1Q02641 598 aaPredicted RBP15.8■□□□□ 0.12
LPP-218ENST00000494044 CNKSR2Q8WXI2 1034 aa15.73■□□□□ 0.11
LPP-218ENST00000494044 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
LPP-218ENST00000494044 HOXD11P31277 338 aaPredicted RBP15.55■□□□□ 0.08
LPP-218ENST00000494044 RNF216Q9NWF9 866 aaPredicted RBP15.51■□□□□ 0.07
LPP-218ENST00000494044 DCAF8L1A6NGE4 600 aa15.38■□□□□ 0.05
LPP-218ENST00000494044 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
LPP-218ENST00000494044 KCNA4P22459 653 aa15.24■□□□□ 0.03
LPP-218ENST00000494044 DNAJC5BQ9UF47 199 aa14.97□□□□□ -0.01
LPP-218ENST00000494044 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
LPP-218ENST00000494044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.84□□□□□ -0.03
LPP-218ENST00000494044 POTEHQ6S545 545 aa14.81□□□□□ -0.04
LPP-218ENST00000494044 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
LPP-218ENST00000494044 SLC4A2P04920 1241 aa14.54□□□□□ -0.08
LPP-218ENST00000494044 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
LPP-218ENST00000494044 SLC4A1APQ9BWU0 796 aaKnown RBP14.45□□□□□ -0.1
LPP-218ENST00000494044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
LPP-218ENST00000494044 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
LPP-218ENST00000494044 SPINK5Q9NQ38 1064 aaPredicted RBP14.23□□□□□ -0.13
LPP-218ENST00000494044 CAPN15O75808 1086 aa14.22□□□□□ -0.13
LPP-218ENST00000494044 APLP2Q06481 763 aa14.18□□□□□ -0.14
LPP-218ENST00000494044 SAMD1Q6SPF0 538 aaPredicted RBP14.16□□□□□ -0.14
LPP-218ENST00000494044 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
LPP-218ENST00000494044 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
LPP-218ENST00000494044 TRHP20396 242 aaPredicted RBP14.07□□□□□ -0.16
LPP-218ENST00000494044 DSG3P32926 999 aa14.06□□□□□ -0.16
LPP-218ENST00000494044 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
LPP-218ENST00000494044 ZBTB22O15209 634 aa13.99□□□□□ -0.17
LPP-218ENST00000494044 ABCB7O75027 752 aa13.89□□□□□ -0.19
LPP-218ENST00000494044 ATF5Q9Y2D1 282 aaPredicted RBP13.8□□□□□ -0.2
LPP-218ENST00000494044 POLA2Q14181 598 aa13.76□□□□□ -0.21
LPP-218ENST00000494044 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
LPP-218ENST00000494044 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
LPP-218ENST00000494044 EHMT2Q96KQ7 1210 aa13.57□□□□□ -0.24
LPP-218ENST00000494044 ZBTB12Q9Y330 459 aaPredicted RBP13.48□□□□□ -0.25
LPP-218ENST00000494044 RBM42Q9BTD8 480 aaKnown RBP13.42□□□□□ -0.26
LPP-218ENST00000494044 SP7Q8TDD2 431 aaPredicted RBP13.28□□□□□ -0.28
LPP-218ENST00000494044 FBLN2P98095 1184 aa13.27□□□□□ -0.29
LPP-218ENST00000494044 OSCARQ8IYS5 282 aa13.25□□□□□ -0.29
LPP-218ENST00000494044 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
LPP-218ENST00000494044 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
LPP-218ENST00000494044 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
LPP-218ENST00000494044 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
LPP-218ENST00000494044 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
LPP-218ENST00000494044 CHRDL2Q6WN34 429 aa13.08□□□□□ -0.32
LPP-218ENST00000494044 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
LPP-218ENST00000494044 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
LPP-218ENST00000494044 SSUH2Q9Y2M2 353 aa12.91□□□□□ -0.34
LPP-218ENST00000494044 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
LPP-218ENST00000494044 PLSCR2Q9NRY7 297 aa12.81□□□□□ -0.36
LPP-218ENST00000494044 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
LPP-218ENST00000494044 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
LPP-218ENST00000494044 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
LPP-218ENST00000494044 PIP4P2Q8N4L2 257 aa12.76□□□□□ -0.37
LPP-218ENST00000494044 FXR2P51116 673 aaKnown RBP eCLIP12.74□□□□□ -0.37
LPP-218ENST00000494044 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
LPP-218ENST00000494044 HAX1O00165 279 aa12.65□□□□□ -0.38
LPP-218ENST00000494044 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
LPP-218ENST00000494044 PRKAR2AP13861 404 aaKnown RBP12.57□□□□□ -0.4
LPP-218ENST00000494044 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
LPP-218ENST00000494044 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
LPP-218ENST00000494044 LHX8Q68G74 356 aa12.45□□□□□ -0.42
LPP-218ENST00000494044 EVX2Q03828 476 aa12.43□□□□□ -0.42
LPP-218ENST00000494044 PROM2Q8N271 834 aa12.41□□□□□ -0.42
LPP-218ENST00000494044 FKBP8Q14318 412 aa12.34□□□□□ -0.43
LPP-218ENST00000494044 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
LPP-218ENST00000494044 CREBZFQ9NS37 354 aa12.32□□□□□ -0.44
LPP-218ENST00000494044 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
LPP-218ENST00000494044 CD44P16070 742 aaKnown RBP12.18□□□□□ -0.46
LPP-218ENST00000494044 NPM1P06748 294 aaKnown RBP eCLIP12.14□□□□□ -0.47
LPP-218ENST00000494044 MNX1P50219 401 aaPredicted RBP12.13□□□□□ -0.47
LPP-218ENST00000494044 MIER1Q8N108 512 aa12.13□□□□□ -0.47
LPP-218ENST00000494044 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
LPP-218ENST00000494044 GABBR2O75899 941 aa12.08□□□□□ -0.48
LPP-218ENST00000494044 ZRANB1Q9UGI0 708 aa12.07□□□□□ -0.48
LPP-218ENST00000494044 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
LPP-218ENST00000494044 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
LPP-218ENST00000494044 PAK3O75914 559 aaPredicted RBP12.03□□□□□ -0.48
LPP-218ENST00000494044 CLCN6P51797 869 aa12.01□□□□□ -0.49
LPP-218ENST00000494044 ZNF579Q8NAF0 562 aaKnown RBP11.99□□□□□ -0.49
LPP-218ENST00000494044 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
LPP-218ENST00000494044 TSPYL2Q9H2G4 693 aaPredicted RBP11.92□□□□□ -0.5
LPP-218ENST00000494044 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
LPP-218ENST00000494044 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
LPP-218ENST00000494044 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms