RNA–Protein interactions for RNA: ENST00000494039.1

XAGE1B-204, Transcript of X antigen family member 1B, humanhuman

TSL 1 (best)

Gene XAGE1B, Length 359 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XAGE1B-204ENST00000494039 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.24
XAGE1B-204ENST00000494039 CHIC1Q5VXU3 224 aa21.83■■□□□ 1.09
XAGE1B-204ENST00000494039 PHF23Q9BUL5 403 aaPredicted RBP19.28■□□□□ 0.68
XAGE1B-204ENST00000494039 SENP3Q9H4L4 574 aaPredicted RBP19.17■□□□□ 0.66
XAGE1B-204ENST00000494039 FOXD1Q16676 465 aa17.95■□□□□ 0.46
XAGE1B-204ENST00000494039 PLPPR3Q6T4P5 718 aa17.52■□□□□ 0.4
XAGE1B-204ENST00000494039 PPP6R1Q9UPN7 881 aa17.13■□□□□ 0.33
XAGE1B-204ENST00000494039 ADRA2BP18089 450 aa17.05■□□□□ 0.32
XAGE1B-204ENST00000494039 MSH5O43196 834 aa16.81■□□□□ 0.28
XAGE1B-204ENST00000494039 PIAS4Q8N2W9 510 aaPredicted RBP16.79■□□□□ 0.28
XAGE1B-204ENST00000494039 POTEDQ86YR6 584 aa16.7■□□□□ 0.26
XAGE1B-204ENST00000494039 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
XAGE1B-204ENST00000494039 PPP4R3CPQ6ZMV5 832 aa15.47■□□□□ 0.07
XAGE1B-204ENST00000494039 SCAF1Q9H7N4 1312 aaKnown RBP15.37■□□□□ 0.05
XAGE1B-204ENST00000494039 DMRT2Q9Y5R5 561 aa15.31■□□□□ 0.04
XAGE1B-204ENST00000494039 CNKSR2Q8WXI2 1034 aa15.04■□□□□ -0
XAGE1B-204ENST00000494039 HOXD11P31277 338 aaPredicted RBP14.88□□□□□ -0.03
XAGE1B-204ENST00000494039 KCNA4P22459 653 aa14.86□□□□□ -0.03
XAGE1B-204ENST00000494039 NCBP3Q53F19 620 aaKnown RBP14.85□□□□□ -0.03
XAGE1B-204ENST00000494039 RNF216Q9NWF9 866 aaPredicted RBP14.83□□□□□ -0.04
XAGE1B-204ENST00000494039 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
XAGE1B-204ENST00000494039 DCAF8L1A6NGE4 600 aa14.63□□□□□ -0.07
XAGE1B-204ENST00000494039 CACNB1Q02641 598 aaPredicted RBP14.57□□□□□ -0.08
XAGE1B-204ENST00000494039 DNAJC5BQ9UF47 199 aa14.33□□□□□ -0.12
XAGE1B-204ENST00000494039 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
XAGE1B-204ENST00000494039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.13□□□□□ -0.15
XAGE1B-204ENST00000494039 C1QBPQ07021 282 aaKnown RBP14.1□□□□□ -0.15
XAGE1B-204ENST00000494039 SLC4A2P04920 1241 aa14.09□□□□□ -0.15
XAGE1B-204ENST00000494039 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
XAGE1B-204ENST00000494039 U3KPZ7 1027 aaPredicted RBP13.97□□□□□ -0.17
XAGE1B-204ENST00000494039 ZBTB22O15209 634 aa13.74□□□□□ -0.21
XAGE1B-204ENST00000494039 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
XAGE1B-204ENST00000494039 FOXD4L1Q9NU39 408 aa13.65□□□□□ -0.22
XAGE1B-204ENST00000494039 MYCNP04198 464 aaPredicted RBP13.59□□□□□ -0.23
XAGE1B-204ENST00000494039 CAPN15O75808 1086 aa13.54□□□□□ -0.24
XAGE1B-204ENST00000494039 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.48□□□□□ -0.25
XAGE1B-204ENST00000494039 HNRNPUL2Q1KMD3 747 aaKnown RBP13.48□□□□□ -0.25
XAGE1B-204ENST00000494039 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
XAGE1B-204ENST00000494039 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
XAGE1B-204ENST00000494039 DSG3P32926 999 aa13.44□□□□□ -0.26
XAGE1B-204ENST00000494039 ATF5Q9Y2D1 282 aaPredicted RBP13.42□□□□□ -0.26
XAGE1B-204ENST00000494039 APLP2Q06481 763 aa13.36□□□□□ -0.27
XAGE1B-204ENST00000494039 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
XAGE1B-204ENST00000494039 ABCB7O75027 752 aa13.34□□□□□ -0.27
XAGE1B-204ENST00000494039 ZNF219Q9P2Y4 722 aaPredicted RBP13.34□□□□□ -0.27
XAGE1B-204ENST00000494039 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
XAGE1B-204ENST00000494039 POLA2Q14181 598 aa13.17□□□□□ -0.3
XAGE1B-204ENST00000494039 ATXN8OSP0DMR3 200 aa13.15□□□□□ -0.3
XAGE1B-204ENST00000494039 POTEHQ6S545 545 aa13.07□□□□□ -0.32
XAGE1B-204ENST00000494039 MKRN4PQ13434 485 aaPredicted RBP12.8□□□□□ -0.36
XAGE1B-204ENST00000494039 ZBTB12Q9Y330 459 aaPredicted RBP12.78□□□□□ -0.36
XAGE1B-204ENST00000494039 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
XAGE1B-204ENST00000494039 OSCARQ8IYS5 282 aa12.76□□□□□ -0.37
XAGE1B-204ENST00000494039 FBLN2P98095 1184 aa12.65□□□□□ -0.38
XAGE1B-204ENST00000494039 CHRDL2Q6WN34 429 aa12.54□□□□□ -0.4
XAGE1B-204ENST00000494039 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
XAGE1B-204ENST00000494039 SPDYE2BA6NHP3 402 aa12.49□□□□□ -0.41
XAGE1B-204ENST00000494039 SPDYE6P0CI01 402 aa12.49□□□□□ -0.41
XAGE1B-204ENST00000494039 SPDYE2Q495Y8 402 aa12.49□□□□□ -0.41
XAGE1B-204ENST00000494039 REM2Q8IYK8 340 aaPredicted RBP12.46□□□□□ -0.41
XAGE1B-204ENST00000494039 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
XAGE1B-204ENST00000494039 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
XAGE1B-204ENST00000494039 PITPNM1O00562 1244 aa12.34□□□□□ -0.43
XAGE1B-204ENST00000494039 PABPN1Q86U42 306 aaKnown RBP eCLIP12.28□□□□□ -0.44
XAGE1B-204ENST00000494039 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
XAGE1B-204ENST00000494039 PIP4P2Q8N4L2 257 aa12.19□□□□□ -0.46
XAGE1B-204ENST00000494039 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
XAGE1B-204ENST00000494039 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
XAGE1B-204ENST00000494039 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
XAGE1B-204ENST00000494039 FXR2P51116 673 aaKnown RBP eCLIP12.15□□□□□ -0.46
XAGE1B-204ENST00000494039 HAX1O00165 279 aa12.08□□□□□ -0.48
XAGE1B-204ENST00000494039 PROM2Q8N271 834 aa12.07□□□□□ -0.48
XAGE1B-204ENST00000494039 FKBP8Q14318 412 aa12.03□□□□□ -0.48
XAGE1B-204ENST00000494039 PRR29P0C7W0 189 aa12□□□□□ -0.49
XAGE1B-204ENST00000494039 CHADLQ6NUI6 762 aa12□□□□□ -0.49
XAGE1B-204ENST00000494039 PRKAR2AP13861 404 aaKnown RBP11.99□□□□□ -0.49
XAGE1B-204ENST00000494039 STAG3Q9UJ98 1225 aa11.89□□□□□ -0.51
XAGE1B-204ENST00000494039 CREBZFQ9NS37 354 aa11.88□□□□□ -0.51
XAGE1B-204ENST00000494039 EVX2Q03828 476 aa11.85□□□□□ -0.51
XAGE1B-204ENST00000494039 FARP1Q9Y4F1 1045 aaPredicted RBP11.79□□□□□ -0.52
XAGE1B-204ENST00000494039 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
XAGE1B-204ENST00000494039 C19orf67A6NJJ6 358 aa11.74□□□□□ -0.53
XAGE1B-204ENST00000494039 MIER1Q8N108 512 aa11.63□□□□□ -0.55
XAGE1B-204ENST00000494039 CD44P16070 742 aaKnown RBP11.62□□□□□ -0.55
XAGE1B-204ENST00000494039 GABBR2O75899 941 aa11.59□□□□□ -0.55
XAGE1B-204ENST00000494039 PLCD3Q8N3E9 789 aa11.55□□□□□ -0.56
XAGE1B-204ENST00000494039 FBXO3Q9UK99 471 aa11.54□□□□□ -0.56
XAGE1B-204ENST00000494039 NPM1P06748 294 aaKnown RBP eCLIP11.51□□□□□ -0.57
XAGE1B-204ENST00000494039 VASPP50552 380 aaPredicted RBP11.51□□□□□ -0.57
XAGE1B-204ENST00000494039 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
XAGE1B-204ENST00000494039 RASEFQ8IZ41 740 aa11.48□□□□□ -0.57
XAGE1B-204ENST00000494039 ZNF579Q8NAF0 562 aaKnown RBP11.46□□□□□ -0.57
XAGE1B-204ENST00000494039 PLEKHG5O94827 1062 aa11.45□□□□□ -0.58
XAGE1B-204ENST00000494039 PHF12Q96QT6 1004 aa11.45□□□□□ -0.58
XAGE1B-204ENST00000494039 NUBP1P53384 320 aa11.44□□□□□ -0.58
XAGE1B-204ENST00000494039 TSPYL2Q9H2G4 693 aaPredicted RBP11.44□□□□□ -0.58
XAGE1B-204ENST00000494039 LHX8Q68G74 356 aa11.42□□□□□ -0.58
XAGE1B-204ENST00000494039 IFNLR1Q8IU57 520 aaPredicted RBP11.39□□□□□ -0.59
XAGE1B-204ENST00000494039 CCDC61Q9Y6R9 512 aa11.38□□□□□ -0.59
XAGE1B-204ENST00000494039 GALR2O43603 387 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms