RNA–Protein interactions for RNA: ENST00000493706.1

XRCC5-210, Transcript of X-ray repair cross complementing 5, humanhuman

TSL 2

Gene XRCC5, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC5-210ENST00000493706 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
XRCC5-210ENST00000493706 CHIC1Q5VXU3 224 aa19.06■□□□□ 0.64
XRCC5-210ENST00000493706 SENP3Q9H4L4 574 aaPredicted RBP17.47■□□□□ 0.39
XRCC5-210ENST00000493706 PHF23Q9BUL5 403 aaPredicted RBP17.14■□□□□ 0.33
XRCC5-210ENST00000493706 FOXD1Q16676 465 aa16.27■□□□□ 0.2
XRCC5-210ENST00000493706 POTEDQ86YR6 584 aa15.84■□□□□ 0.13
XRCC5-210ENST00000493706 MSH5O43196 834 aa15.49■□□□□ 0.07
XRCC5-210ENST00000493706 PIAS4Q8N2W9 510 aaPredicted RBP15.16■□□□□ 0.02
XRCC5-210ENST00000493706 PLPPR3Q6T4P5 718 aa14.91□□□□□ -0.02
XRCC5-210ENST00000493706 PPP6R1Q9UPN7 881 aa14.82□□□□□ -0.04
XRCC5-210ENST00000493706 ADRA2BP18089 450 aa14.79□□□□□ -0.04
XRCC5-210ENST00000493706 DMRT2Q9Y5R5 561 aa13.74□□□□□ -0.21
XRCC5-210ENST00000493706 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
XRCC5-210ENST00000493706 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
XRCC5-210ENST00000493706 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
XRCC5-210ENST00000493706 DCAF8L1A6NGE4 600 aa13.32□□□□□ -0.28
XRCC5-210ENST00000493706 RNF39Q9H2S5 420 aa13.11□□□□□ -0.31
XRCC5-210ENST00000493706 HOXD11P31277 338 aaPredicted RBP13.03□□□□□ -0.32
XRCC5-210ENST00000493706 PPP4R3CPQ6ZMV5 832 aa12.98□□□□□ -0.33
XRCC5-210ENST00000493706 C1QBPQ07021 282 aaKnown RBP12.94□□□□□ -0.34
XRCC5-210ENST00000493706 CNKSR2Q8WXI2 1034 aa12.86□□□□□ -0.35
XRCC5-210ENST00000493706 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
XRCC5-210ENST00000493706 DNAJC5BQ9UF47 199 aa12.68□□□□□ -0.38
XRCC5-210ENST00000493706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.419e-10■■■□□ 16.3
XRCC5-210ENST00000493706 NCBP3Q53F19 620 aaKnown RBP12.42□□□□□ -0.42
XRCC5-210ENST00000493706 POTEHQ6S545 545 aa12.36□□□□□ -0.43
XRCC5-210ENST00000493706 CAPN15O75808 1086 aa12.17□□□□□ -0.46
XRCC5-210ENST00000493706 NPM3O75607 178 aaKnown RBP12.14□□□□□ -0.47
XRCC5-210ENST00000493706 KCNA4P22459 653 aa12.12□□□□□ -0.47
XRCC5-210ENST00000493706 DSG3P32926 999 aa12.12□□□□□ -0.47
XRCC5-210ENST00000493706 U3KPZ7 1027 aaPredicted RBP12.11□□□□□ -0.47
XRCC5-210ENST00000493706 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
XRCC5-210ENST00000493706 APLP2Q06481 763 aa11.88□□□□□ -0.51
XRCC5-210ENST00000493706 TRHP20396 242 aaPredicted RBP11.86□□□□□ -0.51
XRCC5-210ENST00000493706 ABCB7O75027 752 aa11.81□□□□□ -0.52
XRCC5-210ENST00000493706 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
XRCC5-210ENST00000493706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.72□□□□□ -0.53
XRCC5-210ENST00000493706 HNRNPUL2Q1KMD3 747 aaKnown RBP11.72□□□□□ -0.53
XRCC5-210ENST00000493706 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
XRCC5-210ENST00000493706 RBM42Q9BTD8 480 aaKnown RBP11.67□□□□□ -0.54
XRCC5-210ENST00000493706 SAMD1Q6SPF0 538 aaPredicted RBP11.6□□□□□ -0.55
XRCC5-210ENST00000493706 CHRDL2Q6WN34 429 aa11.55□□□□□ -0.56
XRCC5-210ENST00000493706 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
XRCC5-210ENST00000493706 EHMT2Q96KQ7 1210 aa11.45□□□□□ -0.58
XRCC5-210ENST00000493706 POLA2Q14181 598 aa11.41□□□□□ -0.58
XRCC5-210ENST00000493706 SP7Q8TDD2 431 aaPredicted RBP11.37□□□□□ -0.59
XRCC5-210ENST00000493706 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
XRCC5-210ENST00000493706 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
XRCC5-210ENST00000493706 CSRNP3Q8WYN3 585 aa11.25□□□□□ -0.61
XRCC5-210ENST00000493706 ZBTB12Q9Y330 459 aaPredicted RBP11.19□□□□□ -0.62
XRCC5-210ENST00000493706 ZBTB22O15209 634 aa11.17□□□□□ -0.62
XRCC5-210ENST00000493706 HAX1O00165 279 aa11.15□□□□□ -0.62
XRCC5-210ENST00000493706 PIP4P2Q8N4L2 257 aa11.15□□□□□ -0.62
XRCC5-210ENST00000493706 REM2Q8IYK8 340 aaPredicted RBP11.14□□□□□ -0.63
XRCC5-210ENST00000493706 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
XRCC5-210ENST00000493706 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
XRCC5-210ENST00000493706 PITPNM1O00562 1244 aa11.02□□□□□ -0.65
XRCC5-210ENST00000493706 FXR2P51116 673 aaKnown RBP eCLIP11□□□□□ -0.653e-6■□□□□ 11
XRCC5-210ENST00000493706 ATF5Q9Y2D1 282 aaPredicted RBP10.97□□□□□ -0.65
XRCC5-210ENST00000493706 EVX2Q03828 476 aa10.85□□□□□ -0.67
XRCC5-210ENST00000493706 PRKAR2AP13861 404 aaKnown RBP10.77□□□□□ -0.69
XRCC5-210ENST00000493706 SPDYE2BA6NHP3 402 aa10.75□□□□□ -0.69
XRCC5-210ENST00000493706 SPDYE6P0CI01 402 aa10.75□□□□□ -0.69
XRCC5-210ENST00000493706 SPDYE2Q495Y8 402 aa10.75□□□□□ -0.69
XRCC5-210ENST00000493706 CLEC11AQ9Y240 323 aa10.74□□□□□ -0.69
XRCC5-210ENST00000493706 FBLN2P98095 1184 aa10.73□□□□□ -0.69
XRCC5-210ENST00000493706 SPDYE1Q8NFV5 336 aaPredicted RBP10.71□□□□□ -0.69
XRCC5-210ENST00000493706 LHX8Q68G74 356 aa10.68□□□□□ -0.7
XRCC5-210ENST00000493706 C19orf67A6NJJ6 358 aa10.66□□□□□ -0.7
XRCC5-210ENST00000493706 GABBR2O75899 941 aa10.64□□□□□ -0.71
XRCC5-210ENST00000493706 ATXN8OSP0DMR3 200 aa10.64□□□□□ -0.71
XRCC5-210ENST00000493706 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
XRCC5-210ENST00000493706 CHADLQ6NUI6 762 aa10.52□□□□□ -0.73
XRCC5-210ENST00000493706 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
XRCC5-210ENST00000493706 PRR29P0C7W0 189 aa10.49□□□□□ -0.73
XRCC5-210ENST00000493706 MKRN4PQ13434 485 aaPredicted RBP10.44□□□□□ -0.74
XRCC5-210ENST00000493706 PLSCR2Q9NRY7 297 aa10.44□□□□□ -0.74
XRCC5-210ENST00000493706 CD44P16070 742 aaKnown RBP10.4□□□□□ -0.74
XRCC5-210ENST00000493706 PABPN1Q86U42 306 aaKnown RBP eCLIP10.39□□□□□ -0.75
XRCC5-210ENST00000493706 CLCN6P51797 869 aa10.38□□□□□ -0.75
XRCC5-210ENST00000493706 POTEIP0CG38 1075 aa10.35□□□□□ -0.75
XRCC5-210ENST00000493706 DCBLD2Q96PD2 775 aa10.34□□□□□ -0.75
XRCC5-210ENST00000493706 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
XRCC5-210ENST00000493706 ZRANB1Q9UGI0 708 aa10.2□□□□□ -0.78
XRCC5-210ENST00000493706 ZNF579Q8NAF0 562 aaKnown RBP10.18□□□□□ -0.78
XRCC5-210ENST00000493706 FKBP8Q14318 412 aa10.14□□□□□ -0.79
XRCC5-210ENST00000493706 OTUD5Q96G74 571 aa10.09□□□□□ -0.79
XRCC5-210ENST00000493706 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
XRCC5-210ENST00000493706 PAK3O75914 559 aaPredicted RBP10.08□□□□□ -0.8
XRCC5-210ENST00000493706 POTEMA6NI47 508 aa10.07□□□□□ -0.8
XRCC5-210ENST00000493706 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
XRCC5-210ENST00000493706 POTEGQ6S5H5 508 aa10.03□□□□□ -0.8
XRCC5-210ENST00000493706 CREBZFQ9NS37 354 aa10.03□□□□□ -0.8
XRCC5-210ENST00000493706 POTEB2H3BUK9 544 aa10□□□□□ -0.81
XRCC5-210ENST00000493706 PCDH10Q9P2E7 1040 aa9.97□□□□□ -0.81
XRCC5-210ENST00000493706 PHF12Q96QT6 1004 aa9.96□□□□□ -0.82
XRCC5-210ENST00000493706 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
XRCC5-210ENST00000493706 NPM1P06748 294 aaKnown RBP eCLIP9.94□□□□□ -0.82
XRCC5-210ENST00000493706 MAMSTRQ6ZN01 415 aa9.89□□□□□ -0.83
XRCC5-210ENST00000493706 PELP1Q8IZL8 1130 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms