RNA–Protein interactions for RNA: ENST00000493577.1

CLASP2-221, Transcript of cytoplasmic linker associated protein 2, humanhuman

TSL 3

Gene CLASP2, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP2-221ENST00000493577 AEBP2Q6ZN18 517 aaPredicted RBP31.17■■■□□ 2.58
CLASP2-221ENST00000493577 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
CLASP2-221ENST00000493577 SENP3Q9H4L4 574 aaPredicted RBP26.36■■□□□ 1.81
CLASP2-221ENST00000493577 PHF23Q9BUL5 403 aaPredicted RBP26.14■■□□□ 1.78
CLASP2-221ENST00000493577 FOXD1Q16676 465 aa24.73■■□□□ 1.55
CLASP2-221ENST00000493577 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
CLASP2-221ENST00000493577 PPP6R1Q9UPN7 881 aa23.21■■□□□ 1.31
CLASP2-221ENST00000493577 ADRA2BP18089 450 aa23.08■■□□□ 1.29
CLASP2-221ENST00000493577 PIAS4Q8N2W9 510 aaPredicted RBP22.98■■□□□ 1.27
CLASP2-221ENST00000493577 MSH5O43196 834 aa22.95■■□□□ 1.26
CLASP2-221ENST00000493577 POTEDQ86YR6 584 aa22.59■■□□□ 1.21
CLASP2-221ENST00000493577 MAPK8IP2Q13387 824 aaPredicted RBP21.25■□□□□ 0.99
CLASP2-221ENST00000493577 DMRT2Q9Y5R5 561 aa20.97■□□□□ 0.95
CLASP2-221ENST00000493577 SCAF1Q9H7N4 1312 aaKnown RBP20.86■□□□□ 0.93
CLASP2-221ENST00000493577 PPP4R3CPQ6ZMV5 832 aa20.62■□□□□ 0.89
CLASP2-221ENST00000493577 HOXD11P31277 338 aaPredicted RBP20.21■□□□□ 0.83
CLASP2-221ENST00000493577 CNKSR2Q8WXI2 1034 aa20.18■□□□□ 0.82
CLASP2-221ENST00000493577 DCAF8L1A6NGE4 600 aa20.03■□□□□ 0.8
CLASP2-221ENST00000493577 RNF216Q9NWF9 866 aaPredicted RBP20■□□□□ 0.79
CLASP2-221ENST00000493577 CACNB1Q02641 598 aaPredicted RBP19.75■□□□□ 0.75
CLASP2-221ENST00000493577 RNF39Q9H2S5 420 aa19.7■□□□□ 0.74
CLASP2-221ENST00000493577 NCBP3Q53F19 620 aaKnown RBP19.68■□□□□ 0.74
CLASP2-221ENST00000493577 NPM3O75607 178 aaKnown RBP19.57■□□□□ 0.72
CLASP2-221ENST00000493577 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
CLASP2-221ENST00000493577 C1QBPQ07021 282 aaKnown RBP19.33■□□□□ 0.68
CLASP2-221ENST00000493577 KCNA4P22459 653 aa19.22■□□□□ 0.67
CLASP2-221ENST00000493577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.17■□□□□ 0.66
CLASP2-221ENST00000493577 U3KPZ7 1027 aaPredicted RBP18.88■□□□□ 0.61
CLASP2-221ENST00000493577 SLC4A2P04920 1241 aa18.76■□□□□ 0.59
CLASP2-221ENST00000493577 SPINK5Q9NQ38 1064 aaPredicted RBP18.64■□□□□ 0.57
CLASP2-221ENST00000493577 CAPN15O75808 1086 aa18.48■□□□□ 0.55
CLASP2-221ENST00000493577 DSG3P32926 999 aa18.47■□□□□ 0.55
CLASP2-221ENST00000493577 TRHP20396 242 aaPredicted RBP18.21■□□□□ 0.51
CLASP2-221ENST00000493577 ABCB7O75027 752 aa18.12■□□□□ 0.49
CLASP2-221ENST00000493577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.11■□□□□ 0.49
CLASP2-221ENST00000493577 HNRNPUL2Q1KMD3 747 aaKnown RBP18.11■□□□□ 0.49
CLASP2-221ENST00000493577 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
CLASP2-221ENST00000493577 APLP2Q06481 763 aa18.06■□□□□ 0.48
CLASP2-221ENST00000493577 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
CLASP2-221ENST00000493577 SLC4A1APQ9BWU0 796 aaKnown RBP18.03■□□□□ 0.48
CLASP2-221ENST00000493577 MYCNP04198 464 aaPredicted RBP17.98■□□□□ 0.47
CLASP2-221ENST00000493577 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
CLASP2-221ENST00000493577 ATF5Q9Y2D1 282 aaPredicted RBP17.79■□□□□ 0.44
CLASP2-221ENST00000493577 ZBTB22O15209 634 aa17.75■□□□□ 0.43
CLASP2-221ENST00000493577 POLA2Q14181 598 aa17.75■□□□□ 0.43
CLASP2-221ENST00000493577 POTEHQ6S545 545 aa17.65■□□□□ 0.42
CLASP2-221ENST00000493577 EHMT2Q96KQ7 1210 aa17.43■□□□□ 0.38
CLASP2-221ENST00000493577 RBM42Q9BTD8 480 aaKnown RBP17.42■□□□□ 0.38
CLASP2-221ENST00000493577 ATXN8OSP0DMR3 200 aa17.24■□□□□ 0.35
CLASP2-221ENST00000493577 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
CLASP2-221ENST00000493577 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
CLASP2-221ENST00000493577 CHRDL2Q6WN34 429 aa17.17■□□□□ 0.34
CLASP2-221ENST00000493577 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
CLASP2-221ENST00000493577 AKT1S1Q96B36 256 aa17.12■□□□□ 0.33
CLASP2-221ENST00000493577 REM2Q8IYK8 340 aaPredicted RBP17.03■□□□□ 0.32
CLASP2-221ENST00000493577 MKRN4PQ13434 485 aaPredicted RBP16.94■□□□□ 0.3
CLASP2-221ENST00000493577 PITPNM1O00562 1244 aa16.85■□□□□ 0.29
CLASP2-221ENST00000493577 FBLN2P98095 1184 aa16.82■□□□□ 0.28
CLASP2-221ENST00000493577 PIP4P2Q8N4L2 257 aa16.82■□□□□ 0.28
CLASP2-221ENST00000493577 SPDYE2BA6NHP3 402 aa16.77■□□□□ 0.28
CLASP2-221ENST00000493577 SPDYE6P0CI01 402 aa16.77■□□□□ 0.28
CLASP2-221ENST00000493577 SPDYE2Q495Y8 402 aa16.77■□□□□ 0.28
CLASP2-221ENST00000493577 FXR2P51116 673 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLASP2-221ENST00000493577 SSUH2Q9Y2M2 353 aa16.62■□□□□ 0.25
CLASP2-221ENST00000493577 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
CLASP2-221ENST00000493577 SP7Q8TDD2 431 aaPredicted RBP16.52■□□□□ 0.24
CLASP2-221ENST00000493577 CLEC11AQ9Y240 323 aa16.47■□□□□ 0.23
CLASP2-221ENST00000493577 SPDYE1Q8NFV5 336 aaPredicted RBP16.46■□□□□ 0.23
CLASP2-221ENST00000493577 HAX1O00165 279 aa16.45■□□□□ 0.22
CLASP2-221ENST00000493577 EVX2Q03828 476 aa16.45■□□□□ 0.22
CLASP2-221ENST00000493577 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
CLASP2-221ENST00000493577 PRKAR2AP13861 404 aaKnown RBP16.37■□□□□ 0.21
CLASP2-221ENST00000493577 CHADLQ6NUI6 762 aa16.27■□□□□ 0.2
CLASP2-221ENST00000493577 PRR29P0C7W0 189 aa16.19■□□□□ 0.18
CLASP2-221ENST00000493577 C19orf67A6NJJ6 358 aa16.18■□□□□ 0.18
CLASP2-221ENST00000493577 SPDYE4A6NLX3 237 aa16■□□□□ 0.15
CLASP2-221ENST00000493577 FARP1Q9Y4F1 1045 aaPredicted RBP15.96■□□□□ 0.15
CLASP2-221ENST00000493577 GABBR2O75899 941 aa15.95■□□□□ 0.14
CLASP2-221ENST00000493577 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
CLASP2-221ENST00000493577 CD44P16070 742 aaKnown RBP15.83■□□□□ 0.12
CLASP2-221ENST00000493577 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
CLASP2-221ENST00000493577 POTEIP0CG38 1075 aa15.71■□□□□ 0.11
CLASP2-221ENST00000493577 PROM2Q8N271 834 aa15.69■□□□□ 0.1
CLASP2-221ENST00000493577 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
CLASP2-221ENST00000493577 ZRANB1Q9UGI0 708 aa15.62■□□□□ 0.09
CLASP2-221ENST00000493577 FKBP8Q14318 412 aa15.6■□□□□ 0.09
CLASP2-221ENST00000493577 ZNF579Q8NAF0 562 aaKnown RBP15.6■□□□□ 0.09
CLASP2-221ENST00000493577 LHX8Q68G74 356 aa15.51■□□□□ 0.07
CLASP2-221ENST00000493577 CLCN6P51797 869 aa15.5■□□□□ 0.07
CLASP2-221ENST00000493577 GALR2O43603 387 aaPredicted RBP15.48■□□□□ 0.07
CLASP2-221ENST00000493577 PHF12Q96QT6 1004 aa15.46■□□□□ 0.07
CLASP2-221ENST00000493577 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
CLASP2-221ENST00000493577 DCBLD2Q96PD2 775 aa15.39■□□□□ 0.05
CLASP2-221ENST00000493577 PAK3O75914 559 aaPredicted RBP15.33■□□□□ 0.04
CLASP2-221ENST00000493577 PELP1Q8IZL8 1130 aaKnown RBP15.27■□□□□ 0.04
CLASP2-221ENST00000493577 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
CLASP2-221ENST00000493577 MIER1Q8N108 512 aa15.25■□□□□ 0.03
CLASP2-221ENST00000493577 MS4A3Q96HJ5 214 aa15.24■□□□□ 0.03
CLASP2-221ENST00000493577 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
CLASP2-221ENST00000493577 POTEB2H3BUK9 544 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms