RNA–Protein interactions for RNA: ENST00000493432.5

PLSCR1-218, Transcript of phospholipid scramblase 1, humanhuman

TSL 1 (best)

Gene PLSCR1, Length 1,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLSCR1-218ENST00000493432 AEBP2Q6ZN18 517 aaPredicted RBP33.65■■■□□ 2.98
PLSCR1-218ENST00000493432 CHIC1Q5VXU3 224 aa31.39■■■□□ 2.62
PLSCR1-218ENST00000493432 SENP3Q9H4L4 574 aaPredicted RBP28.78■■■□□ 2.2
PLSCR1-218ENST00000493432 PHF23Q9BUL5 403 aaPredicted RBP28.3■■■□□ 2.12
PLSCR1-218ENST00000493432 FOXD1Q16676 465 aa26.92■■□□□ 1.9
PLSCR1-218ENST00000493432 POTEDQ86YR6 584 aa25.98■■□□□ 1.75
PLSCR1-218ENST00000493432 MSH5O43196 834 aa25.44■■□□□ 1.66
PLSCR1-218ENST00000493432 PIAS4Q8N2W9 510 aaPredicted RBP24.95■■□□□ 1.59
PLSCR1-218ENST00000493432 PLPPR3Q6T4P5 718 aa24.67■■□□□ 1.54
PLSCR1-218ENST00000493432 PPP6R1Q9UPN7 881 aa24.65■■□□□ 1.54
PLSCR1-218ENST00000493432 ADRA2BP18089 450 aa24.51■■□□□ 1.51
PLSCR1-218ENST00000493432 DMRT2Q9Y5R5 561 aa22.74■■□□□ 1.23
PLSCR1-218ENST00000493432 MAPK8IP2Q13387 824 aaPredicted RBP22.71■■□□□ 1.23
PLSCR1-218ENST00000493432 SCAF1Q9H7N4 1312 aaKnown RBP22.41■■□□□ 1.18
PLSCR1-218ENST00000493432 CACNB1Q02641 598 aaPredicted RBP22.21■■□□□ 1.15
PLSCR1-218ENST00000493432 DCAF8L1A6NGE4 600 aa21.73■■□□□ 1.07
PLSCR1-218ENST00000493432 RNF39Q9H2S5 420 aa21.67■■□□□ 1.06
PLSCR1-218ENST00000493432 HOXD11P31277 338 aaPredicted RBP21.65■■□□□ 1.06
PLSCR1-218ENST00000493432 PPP4R3CPQ6ZMV5 832 aa21.53■■□□□ 1.04
PLSCR1-218ENST00000493432 C1QBPQ07021 282 aaKnown RBP21.3■■□□□ 1
PLSCR1-218ENST00000493432 CNKSR2Q8WXI2 1034 aa21.29■■□□□ 1
PLSCR1-218ENST00000493432 RNF216Q9NWF9 866 aaPredicted RBP21.28■■□□□ 1
PLSCR1-218ENST00000493432 DNAJC5BQ9UF47 199 aa21.08■□□□□ 0.96
PLSCR1-218ENST00000493432 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.88
PLSCR1-218ENST00000493432 NCBP3Q53F19 620 aaKnown RBP20.47■□□□□ 0.87
PLSCR1-218ENST00000493432 POTEHQ6S545 545 aa20.21■□□□□ 0.83
PLSCR1-218ENST00000493432 NPM3O75607 178 aaKnown RBP20.21■□□□□ 0.83
PLSCR1-218ENST00000493432 U3KPZ7 1027 aaPredicted RBP20.09■□□□□ 0.81
PLSCR1-218ENST00000493432 DSG3P32926 999 aa20.05■□□□□ 0.8
PLSCR1-218ENST00000493432 SPINK5Q9NQ38 1064 aaPredicted RBP19.98■□□□□ 0.79
PLSCR1-218ENST00000493432 CAPN15O75808 1086 aa19.94■□□□□ 0.78
PLSCR1-218ENST00000493432 SLC4A2P04920 1241 aa19.5■□□□□ 0.71
PLSCR1-218ENST00000493432 TRHP20396 242 aaPredicted RBP19.45■□□□□ 0.7
PLSCR1-218ENST00000493432 ZNF219Q9P2Y4 722 aaPredicted RBP19.44■□□□□ 0.7
PLSCR1-218ENST00000493432 ABCB7O75027 752 aa19.43■□□□□ 0.7
PLSCR1-218ENST00000493432 APLP2Q06481 763 aa19.42■□□□□ 0.7
PLSCR1-218ENST00000493432 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.25■□□□□ 0.67
PLSCR1-218ENST00000493432 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
PLSCR1-218ENST00000493432 KCNA4P22459 653 aa19.22■□□□□ 0.67
PLSCR1-218ENST00000493432 RBM42Q9BTD8 480 aaKnown RBP19.13■□□□□ 0.65
PLSCR1-218ENST00000493432 SAMD1Q6SPF0 538 aaPredicted RBP19.12■□□□□ 0.65
PLSCR1-218ENST00000493432 CHRDL2Q6WN34 429 aa18.98■□□□□ 0.63
PLSCR1-218ENST00000493432 POLA2Q14181 598 aa18.81■□□□□ 0.6
PLSCR1-218ENST00000493432 MYCNP04198 464 aaPredicted RBP18.71■□□□□ 0.59
PLSCR1-218ENST00000493432 SP7Q8TDD2 431 aaPredicted RBP18.64■□□□□ 0.57
PLSCR1-218ENST00000493432 AKT1S1Q96B36 256 aa18.55■□□□□ 0.56
PLSCR1-218ENST00000493432 PIP4P2Q8N4L2 257 aa18.4■□□□□ 0.54
PLSCR1-218ENST00000493432 ZBTB12Q9Y330 459 aaPredicted RBP18.39■□□□□ 0.53
PLSCR1-218ENST00000493432 REM2Q8IYK8 340 aaPredicted RBP18.38■□□□□ 0.53
PLSCR1-218ENST00000493432 ATF5Q9Y2D1 282 aaPredicted RBP18.33■□□□□ 0.53
PLSCR1-218ENST00000493432 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
PLSCR1-218ENST00000493432 HAX1O00165 279 aa18.19■□□□□ 0.5
PLSCR1-218ENST00000493432 PITPNM1O00562 1244 aa18.19■□□□□ 0.5
PLSCR1-218ENST00000493432 FXR2P51116 673 aaKnown RBP eCLIP18.19■□□□□ 0.5
PLSCR1-218ENST00000493432 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
PLSCR1-218ENST00000493432 SLC4A1APQ9BWU0 796 aaKnown RBP17.98■□□□□ 0.47
PLSCR1-218ENST00000493432 EVX2Q03828 476 aa17.97■□□□□ 0.47
PLSCR1-218ENST00000493432 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
PLSCR1-218ENST00000493432 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
PLSCR1-218ENST00000493432 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
PLSCR1-218ENST00000493432 PRKAR2AP13861 404 aaKnown RBP17.69■□□□□ 0.42
PLSCR1-218ENST00000493432 ZBTB22O15209 634 aa17.68■□□□□ 0.42
PLSCR1-218ENST00000493432 ATXN8OSP0DMR3 200 aa17.67■□□□□ 0.42
PLSCR1-218ENST00000493432 C19orf67A6NJJ6 358 aa17.64■□□□□ 0.41
PLSCR1-218ENST00000493432 FBLN2P98095 1184 aa17.62■□□□□ 0.41
PLSCR1-218ENST00000493432 SPDYE1Q8NFV5 336 aaPredicted RBP17.62■□□□□ 0.41
PLSCR1-218ENST00000493432 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
PLSCR1-218ENST00000493432 GABBR2O75899 941 aa17.52■□□□□ 0.39
PLSCR1-218ENST00000493432 SSUH2Q9Y2M2 353 aa17.5■□□□□ 0.39
PLSCR1-218ENST00000493432 MKRN4PQ13434 485 aaPredicted RBP17.48■□□□□ 0.39
PLSCR1-218ENST00000493432 LHX8Q68G74 356 aa17.45■□□□□ 0.38
PLSCR1-218ENST00000493432 ZNF692Q9BU19 519 aaPredicted RBP17.4■□□□□ 0.38
PLSCR1-218ENST00000493432 CHADLQ6NUI6 762 aa17.33■□□□□ 0.36
PLSCR1-218ENST00000493432 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
PLSCR1-218ENST00000493432 POTEIP0CG38 1075 aa17.17■□□□□ 0.34
PLSCR1-218ENST00000493432 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
PLSCR1-218ENST00000493432 CD44P16070 742 aaKnown RBP17.09■□□□□ 0.33
PLSCR1-218ENST00000493432 FARP1Q9Y4F1 1045 aaPredicted RBP17.03■□□□□ 0.32
PLSCR1-218ENST00000493432 CLCN6P51797 869 aa17.02■□□□□ 0.32
PLSCR1-218ENST00000493432 DCBLD2Q96PD2 775 aa16.86■□□□□ 0.29
PLSCR1-218ENST00000493432 ZNF579Q8NAF0 562 aaKnown RBP16.84■□□□□ 0.29
PLSCR1-218ENST00000493432 PLSCR2Q9NRY7 297 aa16.84■□□□□ 0.29
PLSCR1-218ENST00000493432 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
PLSCR1-218ENST00000493432 CREBZFQ9NS37 354 aa16.67■□□□□ 0.26
PLSCR1-218ENST00000493432 GALR2O43603 387 aaPredicted RBP16.65■□□□□ 0.26
PLSCR1-218ENST00000493432 OTUD5Q96G74 571 aa16.65■□□□□ 0.26
PLSCR1-218ENST00000493432 POTEB2H3BUK9 544 aa16.59■□□□□ 0.25
PLSCR1-218ENST00000493432 STAG3Q9UJ98 1225 aa16.53■□□□□ 0.24
PLSCR1-218ENST00000493432 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
PLSCR1-218ENST00000493432 POTEMA6NI47 508 aa16.47■□□□□ 0.23
PLSCR1-218ENST00000493432 PHF12Q96QT6 1004 aa16.46■□□□□ 0.23
PLSCR1-218ENST00000493432 EHMT2Q96KQ7 1210 aa16.44■□□□□ 0.22
PLSCR1-218ENST00000493432 PAK3O75914 559 aaPredicted RBP16.43■□□□□ 0.22
PLSCR1-218ENST00000493432 PELP1Q8IZL8 1130 aaKnown RBP16.41■□□□□ 0.22
PLSCR1-218ENST00000493432 POTEGQ6S5H5 508 aa16.4■□□□□ 0.22
PLSCR1-218ENST00000493432 MNX1P50219 401 aaPredicted RBP16.33■□□□□ 0.2
PLSCR1-218ENST00000493432 NPM1P06748 294 aaKnown RBP eCLIP16.3■□□□□ 0.2
PLSCR1-218ENST00000493432 ASTLQ6HA08 431 aaPredicted RBP16.29■□□□□ 0.2
PLSCR1-218ENST00000493432 METRNQ9UJH8 293 aa16.26■□□□□ 0.19
PLSCR1-218ENST00000493432 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms