RNA–Protein interactions for RNA: ENST00000493413.1

HMCN1-205, Transcript of hemicentin 1, humanhuman

TSL 3

Gene HMCN1, Length 720 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-205ENST00000493413 AEBP2Q6ZN18 517 aaPredicted RBP28.06■■■□□ 2.08
HMCN1-205ENST00000493413 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
HMCN1-205ENST00000493413 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
HMCN1-205ENST00000493413 PHF23Q9BUL5 403 aaPredicted RBP23.56■■□□□ 1.36
HMCN1-205ENST00000493413 FOXD1Q16676 465 aa22.38■■□□□ 1.17
HMCN1-205ENST00000493413 POTEDQ86YR6 584 aa21.24■□□□□ 0.99
HMCN1-205ENST00000493413 MSH5O43196 834 aa20.97■□□□□ 0.95
HMCN1-205ENST00000493413 PIAS4Q8N2W9 510 aaPredicted RBP20.77■□□□□ 0.92
HMCN1-205ENST00000493413 PLPPR3Q6T4P5 718 aa20.69■□□□□ 0.9
HMCN1-205ENST00000493413 PPP6R1Q9UPN7 881 aa20.68■□□□□ 0.9
HMCN1-205ENST00000493413 ADRA2BP18089 450 aa20.57■□□□□ 0.88
HMCN1-205ENST00000493413 MAPK8IP2Q13387 824 aaPredicted RBP19.04■□□□□ 0.64
HMCN1-205ENST00000493413 DMRT2Q9Y5R5 561 aa18.9■□□□□ 0.62
HMCN1-205ENST00000493413 SCAF1Q9H7N4 1312 aaKnown RBP18.66■□□□□ 0.58
HMCN1-205ENST00000493413 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
HMCN1-205ENST00000493413 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
HMCN1-205ENST00000493413 PPP4R3CPQ6ZMV5 832 aa18.14■□□□□ 0.49
HMCN1-205ENST00000493413 HOXD11P31277 338 aaPredicted RBP18.04■□□□□ 0.48
HMCN1-205ENST00000493413 RNF39Q9H2S5 420 aa17.93■□□□□ 0.46
HMCN1-205ENST00000493413 CNKSR2Q8WXI2 1034 aa17.84■□□□□ 0.45
HMCN1-205ENST00000493413 RNF216Q9NWF9 866 aaPredicted RBP17.78■□□□□ 0.44
HMCN1-205ENST00000493413 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
HMCN1-205ENST00000493413 DNAJC5BQ9UF47 199 aa17.42■□□□□ 0.38
HMCN1-205ENST00000493413 NCBP3Q53F19 620 aaKnown RBP17.23■□□□□ 0.35
HMCN1-205ENST00000493413 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.17■□□□□ 0.34
HMCN1-205ENST00000493413 NPM3O75607 178 aaKnown RBP17.09■□□□□ 0.33
HMCN1-205ENST00000493413 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
HMCN1-205ENST00000493413 SPINK5Q9NQ38 1064 aaPredicted RBP16.73■□□□□ 0.27
HMCN1-205ENST00000493413 DSG3P32926 999 aa16.67■□□□□ 0.26
HMCN1-205ENST00000493413 CAPN15O75808 1086 aa16.64■□□□□ 0.25
HMCN1-205ENST00000493413 POTEHQ6S545 545 aa16.53■□□□□ 0.24
HMCN1-205ENST00000493413 SLC4A2P04920 1241 aa16.46■□□□□ 0.23
HMCN1-205ENST00000493413 KCNA4P22459 653 aa16.45■□□□□ 0.22
HMCN1-205ENST00000493413 TRHP20396 242 aaPredicted RBP16.31■□□□□ 0.2
HMCN1-205ENST00000493413 ABCB7O75027 752 aa16.28■□□□□ 0.2
HMCN1-205ENST00000493413 ZNF219Q9P2Y4 722 aaPredicted RBP16.18■□□□□ 0.18
HMCN1-205ENST00000493413 APLP2Q06481 763 aa16.13■□□□□ 0.17
HMCN1-205ENST00000493413 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
HMCN1-205ENST00000493413 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
HMCN1-205ENST00000493413 SAMD1Q6SPF0 538 aaPredicted RBP16■□□□□ 0.15
HMCN1-205ENST00000493413 RBM42Q9BTD8 480 aaKnown RBP15.81■□□□□ 0.12
HMCN1-205ENST00000493413 POLA2Q14181 598 aa15.78■□□□□ 0.12
HMCN1-205ENST00000493413 MYCNP04198 464 aaPredicted RBP15.75■□□□□ 0.11
HMCN1-205ENST00000493413 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
HMCN1-205ENST00000493413 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
HMCN1-205ENST00000493413 AKT1S1Q96B36 256 aa15.41■□□□□ 0.06
HMCN1-205ENST00000493413 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
HMCN1-205ENST00000493413 FOXD4L1Q9NU39 408 aa15.39■□□□□ 0.05
HMCN1-205ENST00000493413 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
HMCN1-205ENST00000493413 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
HMCN1-205ENST00000493413 ZBTB12Q9Y330 459 aaPredicted RBP15.32■□□□□ 0.04
HMCN1-205ENST00000493413 SP7Q8TDD2 431 aaPredicted RBP15.31■□□□□ 0.04
HMCN1-205ENST00000493413 PIP4P2Q8N4L2 257 aa15.27■□□□□ 0.04
HMCN1-205ENST00000493413 PITPNM1O00562 1244 aa15.18■□□□□ 0.02
HMCN1-205ENST00000493413 ZBTB22O15209 634 aa15.17■□□□□ 0.02
HMCN1-205ENST00000493413 FXR2P51116 673 aaKnown RBP eCLIP15.1■□□□□ 0.01
HMCN1-205ENST00000493413 HAX1O00165 279 aa15.07■□□□□ 0
HMCN1-205ENST00000493413 EVX2Q03828 476 aa14.96□□□□□ -0.01
HMCN1-205ENST00000493413 ATXN8OSP0DMR3 200 aa14.91□□□□□ -0.02
HMCN1-205ENST00000493413 SPDYE2BA6NHP3 402 aa14.87□□□□□ -0.03
HMCN1-205ENST00000493413 SPDYE6P0CI01 402 aa14.87□□□□□ -0.03
HMCN1-205ENST00000493413 SPDYE2Q495Y8 402 aa14.87□□□□□ -0.03
HMCN1-205ENST00000493413 FBLN2P98095 1184 aa14.81□□□□□ -0.04
HMCN1-205ENST00000493413 MKRN4PQ13434 485 aaPredicted RBP14.79□□□□□ -0.04
HMCN1-205ENST00000493413 PRKAR2AP13861 404 aaKnown RBP14.75□□□□□ -0.05
HMCN1-205ENST00000493413 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
HMCN1-205ENST00000493413 SPDYE1Q8NFV5 336 aaPredicted RBP14.69□□□□□ -0.06
HMCN1-205ENST00000493413 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
HMCN1-205ENST00000493413 ZNF692Q9BU19 519 aaPredicted RBP14.65□□□□□ -0.06
HMCN1-205ENST00000493413 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
HMCN1-205ENST00000493413 CHADLQ6NUI6 762 aa14.56□□□□□ -0.08
HMCN1-205ENST00000493413 GABBR2O75899 941 aa14.53□□□□□ -0.08
HMCN1-205ENST00000493413 PABPN1Q86U42 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
HMCN1-205ENST00000493413 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
HMCN1-205ENST00000493413 LHX8Q68G74 356 aa14.36□□□□□ -0.11
HMCN1-205ENST00000493413 POTEIP0CG38 1075 aa14.27□□□□□ -0.13
HMCN1-205ENST00000493413 CD44P16070 742 aaKnown RBP14.25□□□□□ -0.13
HMCN1-205ENST00000493413 FARP1Q9Y4F1 1045 aaPredicted RBP14.25□□□□□ -0.13
HMCN1-205ENST00000493413 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
HMCN1-205ENST00000493413 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
HMCN1-205ENST00000493413 CLCN6P51797 869 aa14.01□□□□□ -0.17
HMCN1-205ENST00000493413 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
HMCN1-205ENST00000493413 ZRANB1Q9UGI0 708 aa14□□□□□ -0.17
HMCN1-205ENST00000493413 DCBLD2Q96PD2 775 aa13.99□□□□□ -0.17
HMCN1-205ENST00000493413 GALR2O43603 387 aaPredicted RBP13.92□□□□□ -0.18
HMCN1-205ENST00000493413 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
HMCN1-205ENST00000493413 SPDYE4A6NLX3 237 aa13.82□□□□□ -0.2
HMCN1-205ENST00000493413 PHF12Q96QT6 1004 aa13.82□□□□□ -0.2
HMCN1-205ENST00000493413 POTEB2H3BUK9 544 aa13.81□□□□□ -0.2
HMCN1-205ENST00000493413 OTUD5Q96G74 571 aa13.79□□□□□ -0.2
HMCN1-205ENST00000493413 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
HMCN1-205ENST00000493413 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
HMCN1-205ENST00000493413 PELP1Q8IZL8 1130 aaKnown RBP13.73□□□□□ -0.21
HMCN1-205ENST00000493413 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
HMCN1-205ENST00000493413 EHMT2Q96KQ7 1210 aa13.67□□□□□ -0.22
HMCN1-205ENST00000493413 NPM1P06748 294 aaKnown RBP eCLIP13.65□□□□□ -0.22
HMCN1-205ENST00000493413 MS4A3Q96HJ5 214 aa13.6□□□□□ -0.23
HMCN1-205ENST00000493413 POTEJP0CG39 1038 aa13.56□□□□□ -0.24
HMCN1-205ENST00000493413 ASTLQ6HA08 431 aaPredicted RBP13.56□□□□□ -0.24
HMCN1-205ENST00000493413 POTEMA6NI47 508 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms