RNA–Protein interactions for RNA: ENST00000493238.1

RNF13-216, Transcript of ring finger protein 13, humanhuman

TSL 2

Gene RNF13, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-216ENST00000493238 AEBP2Q6ZN18 517 aaPredicted RBP24.52■■□□□ 1.52
RNF13-216ENST00000493238 CHIC1Q5VXU3 224 aa23.65■■□□□ 1.38
RNF13-216ENST00000493238 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
RNF13-216ENST00000493238 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
RNF13-216ENST00000493238 FOXD1Q16676 465 aa19.39■□□□□ 0.69
RNF13-216ENST00000493238 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
RNF13-216ENST00000493238 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
RNF13-216ENST00000493238 ADRA2BP18089 450 aa18.36■□□□□ 0.53
RNF13-216ENST00000493238 PIAS4Q8N2W9 510 aaPredicted RBP18.17■□□□□ 0.5
RNF13-216ENST00000493238 MSH5O43196 834 aa17.99■□□□□ 0.47
RNF13-216ENST00000493238 POTEDQ86YR6 584 aa17.07■□□□□ 0.32
RNF13-216ENST00000493238 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
RNF13-216ENST00000493238 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.28
RNF13-216ENST00000493238 PPP4R3CPQ6ZMV5 832 aa16.75■□□□□ 0.27
RNF13-216ENST00000493238 DMRT2Q9Y5R5 561 aa16.6■□□□□ 0.25
RNF13-216ENST00000493238 CNKSR2Q8WXI2 1034 aa16.36■□□□□ 0.21
RNF13-216ENST00000493238 NCBP3Q53F19 620 aaKnown RBP16.21■□□□□ 0.19
RNF13-216ENST00000493238 HOXD11P31277 338 aaPredicted RBP16.16■□□□□ 0.18
RNF13-216ENST00000493238 RNF216Q9NWF9 866 aaPredicted RBP16.12■□□□□ 0.17
RNF13-216ENST00000493238 KCNA4P22459 653 aa15.99■□□□□ 0.15
RNF13-216ENST00000493238 NPM3O75607 178 aaKnown RBP15.98■□□□□ 0.15
RNF13-216ENST00000493238 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
RNF13-216ENST00000493238 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
RNF13-216ENST00000493238 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
RNF13-216ENST00000493238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
RNF13-216ENST00000493238 C1QBPQ07021 282 aaKnown RBP15.2■□□□□ 0.02
RNF13-216ENST00000493238 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
RNF13-216ENST00000493238 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
RNF13-216ENST00000493238 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
RNF13-216ENST00000493238 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
RNF13-216ENST00000493238 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
RNF13-216ENST00000493238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.77□□□□□ -0.05
RNF13-216ENST00000493238 HNRNPUL2Q1KMD3 747 aaKnown RBP14.77□□□□□ -0.05
RNF13-216ENST00000493238 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
RNF13-216ENST00000493238 SPINK5Q9NQ38 1064 aaPredicted RBP14.74□□□□□ -0.05
RNF13-216ENST00000493238 ZBTB22O15209 634 aa14.72□□□□□ -0.05
RNF13-216ENST00000493238 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
RNF13-216ENST00000493238 APLP2Q06481 763 aa14.69□□□□□ -0.06
RNF13-216ENST00000493238 CAPN15O75808 1086 aa14.67□□□□□ -0.06
RNF13-216ENST00000493238 DSG3P32926 999 aa14.55□□□□□ -0.08
RNF13-216ENST00000493238 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
RNF13-216ENST00000493238 TRHP20396 242 aaPredicted RBP14.52□□□□□ -0.09
RNF13-216ENST00000493238 ATF5Q9Y2D1 282 aaPredicted RBP14.4□□□□□ -0.1
RNF13-216ENST00000493238 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
RNF13-216ENST00000493238 ABCB7O75027 752 aa14.36□□□□□ -0.11
RNF13-216ENST00000493238 ATXN8OSP0DMR3 200 aa14.36□□□□□ -0.11
RNF13-216ENST00000493238 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
RNF13-216ENST00000493238 POLA2Q14181 598 aa14.25□□□□□ -0.13
RNF13-216ENST00000493238 ZBTB12Q9Y330 459 aaPredicted RBP13.98□□□□□ -0.17
RNF13-216ENST00000493238 RBM42Q9BTD8 480 aaKnown RBP13.85□□□□□ -0.19
RNF13-216ENST00000493238 FBLN2P98095 1184 aa13.79□□□□□ -0.2
RNF13-216ENST00000493238 MKRN4PQ13434 485 aaPredicted RBP13.77□□□□□ -0.21
RNF13-216ENST00000493238 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
RNF13-216ENST00000493238 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
RNF13-216ENST00000493238 SPDYE2BA6NHP3 402 aa13.61□□□□□ -0.23
RNF13-216ENST00000493238 SPDYE6P0CI01 402 aa13.61□□□□□ -0.23
RNF13-216ENST00000493238 SPDYE2Q495Y8 402 aa13.61□□□□□ -0.23
RNF13-216ENST00000493238 REM2Q8IYK8 340 aaPredicted RBP13.49□□□□□ -0.25
RNF13-216ENST00000493238 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
RNF13-216ENST00000493238 SSUH2Q9Y2M2 353 aa13.47□□□□□ -0.25
RNF13-216ENST00000493238 CHRDL2Q6WN34 429 aa13.39□□□□□ -0.27
RNF13-216ENST00000493238 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
RNF13-216ENST00000493238 POTEHQ6S545 545 aa13.33□□□□□ -0.28
RNF13-216ENST00000493238 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
RNF13-216ENST00000493238 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
RNF13-216ENST00000493238 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
RNF13-216ENST00000493238 FXR2P51116 673 aaKnown RBP eCLIP13.18□□□□□ -0.3
RNF13-216ENST00000493238 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
RNF13-216ENST00000493238 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
RNF13-216ENST00000493238 PROM2Q8N271 834 aa13.08□□□□□ -0.32
RNF13-216ENST00000493238 PRR29P0C7W0 189 aa13.05□□□□□ -0.32
RNF13-216ENST00000493238 STAG3Q9UJ98 1225 aa13.03□□□□□ -0.32
RNF13-216ENST00000493238 PRKAR2AP13861 404 aaKnown RBP12.98□□□□□ -0.33
RNF13-216ENST00000493238 FKBP8Q14318 412 aa12.98□□□□□ -0.33
RNF13-216ENST00000493238 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
RNF13-216ENST00000493238 CREBZFQ9NS37 354 aa12.84□□□□□ -0.35
RNF13-216ENST00000493238 HAX1O00165 279 aa12.8□□□□□ -0.36
RNF13-216ENST00000493238 FARP1Q9Y4F1 1045 aaPredicted RBP12.79□□□□□ -0.36
RNF13-216ENST00000493238 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
RNF13-216ENST00000493238 EVX2Q03828 476 aa12.71□□□□□ -0.37
RNF13-216ENST00000493238 MNX1P50219 401 aaPredicted RBP12.67□□□□□ -0.38
RNF13-216ENST00000493238 SP7Q8TDD2 431 aaPredicted RBP12.67□□□□□ -0.38
RNF13-216ENST00000493238 FBXO3Q9UK99 471 aa12.63□□□□□ -0.39
RNF13-216ENST00000493238 MIER1Q8N108 512 aa12.62□□□□□ -0.39
RNF13-216ENST00000493238 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
RNF13-216ENST00000493238 CD44P16070 742 aaKnown RBP12.59□□□□□ -0.39
RNF13-216ENST00000493238 PLEKHG5O94827 1062 aa12.56□□□□□ -0.4
RNF13-216ENST00000493238 PLCD3Q8N3E9 789 aa12.56□□□□□ -0.4
RNF13-216ENST00000493238 ZRANB1Q9UGI0 708 aa12.47□□□□□ -0.41
RNF13-216ENST00000493238 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
RNF13-216ENST00000493238 ZBTB47Q9UFB7 747 aaPredicted RBP12.46□□□□□ -0.41
RNF13-216ENST00000493238 GABBR2O75899 941 aa12.44□□□□□ -0.42
RNF13-216ENST00000493238 ZNF579Q8NAF0 562 aaKnown RBP12.44□□□□□ -0.42
RNF13-216ENST00000493238 PAK3O75914 559 aaPredicted RBP12.43□□□□□ -0.42
RNF13-216ENST00000493238 CLCN6P51797 869 aa12.41□□□□□ -0.42
RNF13-216ENST00000493238 NUBP1P53384 320 aa12.37□□□□□ -0.43
RNF13-216ENST00000493238 RASEFQ8IZ41 740 aa12.37□□□□□ -0.43
RNF13-216ENST00000493238 TSPYL2Q9H2G4 693 aaPredicted RBP12.35□□□□□ -0.43
RNF13-216ENST00000493238 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
RNF13-216ENST00000493238 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms