RNA–Protein interactions for RNA: ENST00000493045.1

SMG7-207, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-207ENST00000493045 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
SMG7-207ENST00000493045 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
SMG7-207ENST00000493045 SENP3Q9H4L4 574 aaPredicted RBP21.23■□□□□ 0.99
SMG7-207ENST00000493045 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
SMG7-207ENST00000493045 FOXD1Q16676 465 aa19.84■□□□□ 0.77
SMG7-207ENST00000493045 POTEDQ86YR6 584 aa19.01■□□□□ 0.63
SMG7-207ENST00000493045 MSH5O43196 834 aa18.74■□□□□ 0.59
SMG7-207ENST00000493045 PIAS4Q8N2W9 510 aaPredicted RBP18.41■□□□□ 0.54
SMG7-207ENST00000493045 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
SMG7-207ENST00000493045 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
SMG7-207ENST00000493045 ADRA2BP18089 450 aa18.12■□□□□ 0.49
SMG7-207ENST00000493045 MAPK8IP2Q13387 824 aaPredicted RBP16.78■□□□□ 0.28
SMG7-207ENST00000493045 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
SMG7-207ENST00000493045 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
SMG7-207ENST00000493045 CACNB1Q02641 598 aaPredicted RBP16.32■□□□□ 0.2
SMG7-207ENST00000493045 DCAF8L1A6NGE4 600 aa16.06■□□□□ 0.16
SMG7-207ENST00000493045 HOXD11P31277 338 aaPredicted RBP16■□□□□ 0.15
SMG7-207ENST00000493045 PPP4R3CPQ6ZMV5 832 aa15.99■□□□□ 0.15
SMG7-207ENST00000493045 RNF39Q9H2S5 420 aa15.95■□□□□ 0.14
SMG7-207ENST00000493045 CNKSR2Q8WXI2 1034 aa15.79■□□□□ 0.12
SMG7-207ENST00000493045 RNF216Q9NWF9 866 aaPredicted RBP15.76■□□□□ 0.11
SMG7-207ENST00000493045 C1QBPQ07021 282 aaKnown RBP15.7■□□□□ 0.1
SMG7-207ENST00000493045 DNAJC5BQ9UF47 199 aa15.57■□□□□ 0.08
SMG7-207ENST00000493045 NCBP3Q53F19 620 aaKnown RBP15.24■□□□□ 0.03
SMG7-207ENST00000493045 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMG7-207ENST00000493045 NPM3O75607 178 aaKnown RBP15.02■□□□□ -0
SMG7-207ENST00000493045 U3KPZ7 1027 aaPredicted RBP14.86□□□□□ -0.03
SMG7-207ENST00000493045 POTEHQ6S545 545 aa14.8□□□□□ -0.04
SMG7-207ENST00000493045 DSG3P32926 999 aa14.79□□□□□ -0.04
SMG7-207ENST00000493045 SPINK5Q9NQ38 1064 aaPredicted RBP14.76□□□□□ -0.05
SMG7-207ENST00000493045 CAPN15O75808 1086 aa14.75□□□□□ -0.05
SMG7-207ENST00000493045 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
SMG7-207ENST00000493045 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
SMG7-207ENST00000493045 APLP2Q06481 763 aa14.4□□□□□ -0.1
SMG7-207ENST00000493045 ZNF219Q9P2Y4 722 aaPredicted RBP14.38□□□□□ -0.11
SMG7-207ENST00000493045 ABCB7O75027 752 aa14.36□□□□□ -0.11
SMG7-207ENST00000493045 KCNA4P22459 653 aa14.34□□□□□ -0.11
SMG7-207ENST00000493045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
SMG7-207ENST00000493045 HNRNPUL2Q1KMD3 747 aaKnown RBP14.29□□□□□ -0.12
SMG7-207ENST00000493045 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
SMG7-207ENST00000493045 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
SMG7-207ENST00000493045 CHRDL2Q6WN34 429 aa13.97□□□□□ -0.17
SMG7-207ENST00000493045 POLA2Q14181 598 aa13.94□□□□□ -0.18
SMG7-207ENST00000493045 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
SMG7-207ENST00000493045 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
SMG7-207ENST00000493045 SP7Q8TDD2 431 aaPredicted RBP13.68□□□□□ -0.22
SMG7-207ENST00000493045 ZBTB12Q9Y330 459 aaPredicted RBP13.63□□□□□ -0.23
SMG7-207ENST00000493045 ATF5Q9Y2D1 282 aaPredicted RBP13.61□□□□□ -0.23
SMG7-207ENST00000493045 REM2Q8IYK8 340 aaPredicted RBP13.57□□□□□ -0.24
SMG7-207ENST00000493045 PIP4P2Q8N4L2 257 aa13.55□□□□□ -0.24
SMG7-207ENST00000493045 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
SMG7-207ENST00000493045 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
SMG7-207ENST00000493045 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
SMG7-207ENST00000493045 PITPNM1O00562 1244 aa13.43□□□□□ -0.26
SMG7-207ENST00000493045 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMG7-207ENST00000493045 HAX1O00165 279 aa13.41□□□□□ -0.26
SMG7-207ENST00000493045 EVX2Q03828 476 aa13.22□□□□□ -0.29
SMG7-207ENST00000493045 SPDYE2BA6NHP3 402 aa13.18□□□□□ -0.3
SMG7-207ENST00000493045 ZBTB22O15209 634 aa13.18□□□□□ -0.3
SMG7-207ENST00000493045 SPDYE6P0CI01 402 aa13.18□□□□□ -0.3
SMG7-207ENST00000493045 ATXN8OSP0DMR3 200 aa13.18□□□□□ -0.3
SMG7-207ENST00000493045 SPDYE2Q495Y8 402 aa13.18□□□□□ -0.3
SMG7-207ENST00000493045 FBLN2P98095 1184 aa13.1□□□□□ -0.31
SMG7-207ENST00000493045 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
SMG7-207ENST00000493045 SPDYE1Q8NFV5 336 aaPredicted RBP13.04□□□□□ -0.32
SMG7-207ENST00000493045 CLEC11AQ9Y240 323 aa13.03□□□□□ -0.32
SMG7-207ENST00000493045 C19orf67A6NJJ6 358 aa13.01□□□□□ -0.33
SMG7-207ENST00000493045 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
SMG7-207ENST00000493045 SSUH2Q9Y2M2 353 aa12.96□□□□□ -0.33
SMG7-207ENST00000493045 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
SMG7-207ENST00000493045 GABBR2O75899 941 aa12.91□□□□□ -0.34
SMG7-207ENST00000493045 LHX8Q68G74 356 aa12.83□□□□□ -0.36
SMG7-207ENST00000493045 CHADLQ6NUI6 762 aa12.83□□□□□ -0.36
SMG7-207ENST00000493045 PRR29P0C7W0 189 aa12.77□□□□□ -0.37
SMG7-207ENST00000493045 PABPN1Q86U42 306 aaKnown RBP eCLIP12.73□□□□□ -0.37
SMG7-207ENST00000493045 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
SMG7-207ENST00000493045 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
SMG7-207ENST00000493045 FARP1Q9Y4F1 1045 aaPredicted RBP12.61□□□□□ -0.39
SMG7-207ENST00000493045 CLCN6P51797 869 aa12.59□□□□□ -0.39
SMG7-207ENST00000493045 DCBLD2Q96PD2 775 aa12.45□□□□□ -0.42
SMG7-207ENST00000493045 ZNF579Q8NAF0 562 aaKnown RBP12.43□□□□□ -0.42
SMG7-207ENST00000493045 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
SMG7-207ENST00000493045 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
SMG7-207ENST00000493045 PLSCR2Q9NRY7 297 aa12.32□□□□□ -0.44
SMG7-207ENST00000493045 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
SMG7-207ENST00000493045 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
SMG7-207ENST00000493045 OTUD5Q96G74 571 aa12.25□□□□□ -0.45
SMG7-207ENST00000493045 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
SMG7-207ENST00000493045 CSRNP3Q8WYN3 585 aa12.2□□□□□ -0.46
SMG7-207ENST00000493045 PAK3O75914 559 aaPredicted RBP12.19□□□□□ -0.46
SMG7-207ENST00000493045 PHF12Q96QT6 1004 aa12.17□□□□□ -0.46
SMG7-207ENST00000493045 SPDYE4A6NLX3 237 aa12.13□□□□□ -0.47
SMG7-207ENST00000493045 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMG7-207ENST00000493045 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
SMG7-207ENST00000493045 MNX1P50219 401 aaPredicted RBP12.1□□□□□ -0.47
SMG7-207ENST00000493045 POTEMA6NI47 508 aa12.09□□□□□ -0.47
SMG7-207ENST00000493045 POTEGQ6S5H5 508 aa12.04□□□□□ -0.48
SMG7-207ENST00000493045 ASTLQ6HA08 431 aaPredicted RBP12.03□□□□□ -0.48
SMG7-207ENST00000493045 ATMINO43313 823 aaPredicted RBP12□□□□□ -0.49
SMG7-207ENST00000493045 MS4A3Q96HJ5 214 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms