RNA–Protein interactions for RNA: ENST00000492993.5

NME9-210, Transcript of NME/NM23 family member 9, humanhuman

TSL 1 (best)

Gene NME9, Length 1,118 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME9-210ENST00000492993 AEBP2Q6ZN18 517 aaPredicted RBP23.38■■□□□ 1.33
NME9-210ENST00000492993 CHIC1Q5VXU3 224 aa22.01■■□□□ 1.11
NME9-210ENST00000492993 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
NME9-210ENST00000492993 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
NME9-210ENST00000492993 FOXD1Q16676 465 aa18.63■□□□□ 0.57
NME9-210ENST00000492993 MSH5O43196 834 aa17.49■□□□□ 0.39
NME9-210ENST00000492993 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
NME9-210ENST00000492993 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
NME9-210ENST00000492993 PIAS4Q8N2W9 510 aaPredicted RBP17.32■□□□□ 0.36
NME9-210ENST00000492993 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
NME9-210ENST00000492993 ADRA2BP18089 450 aa17.17■□□□□ 0.34
NME9-210ENST00000492993 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
NME9-210ENST00000492993 DMRT2Q9Y5R5 561 aa15.81■□□□□ 0.12
NME9-210ENST00000492993 SCAF1Q9H7N4 1312 aaKnown RBP15.7■□□□□ 0.1
NME9-210ENST00000492993 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
NME9-210ENST00000492993 HOXD11P31277 338 aaPredicted RBP15.18■□□□□ 0.02
NME9-210ENST00000492993 CACNB1Q02641 598 aaPredicted RBP15.07■□□□□ 0
NME9-210ENST00000492993 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
NME9-210ENST00000492993 DCAF8L1A6NGE4 600 aa15.04■□□□□ -0
NME9-210ENST00000492993 RNF216Q9NWF9 866 aaPredicted RBP14.99□□□□□ -0.01
NME9-210ENST00000492993 RNF39Q9H2S5 420 aa14.93□□□□□ -0.02
NME9-210ENST00000492993 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
NME9-210ENST00000492993 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
NME9-210ENST00000492993 NCBP3Q53F19 620 aaKnown RBP14.61□□□□□ -0.07
NME9-210ENST00000492993 NPM3O75607 178 aaKnown RBP14.45□□□□□ -0.1
NME9-210ENST00000492993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.35□□□□□ -0.11
NME9-210ENST00000492993 U3KPZ7 1027 aaPredicted RBP14.1□□□□□ -0.15
NME9-210ENST00000492993 KCNA4P22459 653 aa13.98□□□□□ -0.17
NME9-210ENST00000492993 SPINK5Q9NQ38 1064 aaPredicted RBP13.93□□□□□ -0.18
NME9-210ENST00000492993 DSG3P32926 999 aa13.91□□□□□ -0.18
NME9-210ENST00000492993 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
NME9-210ENST00000492993 CAPN15O75808 1086 aa13.86□□□□□ -0.19
NME9-210ENST00000492993 APLP2Q06481 763 aa13.64□□□□□ -0.23
NME9-210ENST00000492993 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
NME9-210ENST00000492993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.6□□□□□ -0.23
NME9-210ENST00000492993 HNRNPUL2Q1KMD3 747 aaKnown RBP13.6□□□□□ -0.23
NME9-210ENST00000492993 TRHP20396 242 aaPredicted RBP13.59□□□□□ -0.23
NME9-210ENST00000492993 POTEHQ6S545 545 aa13.59□□□□□ -0.23
NME9-210ENST00000492993 ABCB7O75027 752 aa13.54□□□□□ -0.24
NME9-210ENST00000492993 SAMD1Q6SPF0 538 aaPredicted RBP13.51□□□□□ -0.25
NME9-210ENST00000492993 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
NME9-210ENST00000492993 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
NME9-210ENST00000492993 POLA2Q14181 598 aa13.23□□□□□ -0.29
NME9-210ENST00000492993 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
NME9-210ENST00000492993 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
NME9-210ENST00000492993 ATF5Q9Y2D1 282 aaPredicted RBP13.08□□□□□ -0.32
NME9-210ENST00000492993 CHRDL2Q6WN34 429 aa13.03□□□□□ -0.32
NME9-210ENST00000492993 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
NME9-210ENST00000492993 AKT1S1Q96B36 256 aa12.91□□□□□ -0.34
NME9-210ENST00000492993 ZBTB22O15209 634 aa12.88□□□□□ -0.35
NME9-210ENST00000492993 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
NME9-210ENST00000492993 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
NME9-210ENST00000492993 ATXN8OSP0DMR3 200 aa12.76□□□□□ -0.37
NME9-210ENST00000492993 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
NME9-210ENST00000492993 PITPNM1O00562 1244 aa12.66□□□□□ -0.38
NME9-210ENST00000492993 SP7Q8TDD2 431 aaPredicted RBP12.65□□□□□ -0.38
NME9-210ENST00000492993 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
NME9-210ENST00000492993 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
NME9-210ENST00000492993 SPDYE2BA6NHP3 402 aa12.55□□□□□ -0.4
NME9-210ENST00000492993 SPDYE6P0CI01 402 aa12.55□□□□□ -0.4
NME9-210ENST00000492993 SPDYE2Q495Y8 402 aa12.55□□□□□ -0.4
NME9-210ENST00000492993 FBLN2P98095 1184 aa12.51□□□□□ -0.41
NME9-210ENST00000492993 CSRNP3Q8WYN3 585 aa12.51□□□□□ -0.41
NME9-210ENST00000492993 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
NME9-210ENST00000492993 HAX1O00165 279 aa12.46□□□□□ -0.41
NME9-210ENST00000492993 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
NME9-210ENST00000492993 EVX2Q03828 476 aa12.36□□□□□ -0.43
NME9-210ENST00000492993 SPDYE1Q8NFV5 336 aaPredicted RBP12.35□□□□□ -0.43
NME9-210ENST00000492993 ZNF692Q9BU19 519 aaPredicted RBP12.33□□□□□ -0.44
NME9-210ENST00000492993 PRKAR2AP13861 404 aaKnown RBP12.3□□□□□ -0.44
NME9-210ENST00000492993 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
NME9-210ENST00000492993 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
NME9-210ENST00000492993 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
NME9-210ENST00000492993 CHADLQ6NUI6 762 aa12.12□□□□□ -0.47
NME9-210ENST00000492993 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
NME9-210ENST00000492993 GABBR2O75899 941 aa12.06□□□□□ -0.48
NME9-210ENST00000492993 FARP1Q9Y4F1 1045 aaPredicted RBP11.94□□□□□ -0.5
NME9-210ENST00000492993 CD44P16070 742 aaKnown RBP11.89□□□□□ -0.51
NME9-210ENST00000492993 LHX8Q68G74 356 aa11.85□□□□□ -0.51
NME9-210ENST00000492993 POTEIP0CG38 1075 aa11.83□□□□□ -0.52
NME9-210ENST00000492993 CLCN6P51797 869 aa11.83□□□□□ -0.52
NME9-210ENST00000492993 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
NME9-210ENST00000492993 STAG3Q9UJ98 1225 aa11.78□□□□□ -0.52
NME9-210ENST00000492993 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
NME9-210ENST00000492993 ZNF579Q8NAF0 562 aaKnown RBP11.74□□□□□ -0.53
NME9-210ENST00000492993 ZRANB1Q9UGI0 708 aa11.69□□□□□ -0.54
NME9-210ENST00000492993 DCBLD2Q96PD2 775 aa11.64□□□□□ -0.55
NME9-210ENST00000492993 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
NME9-210ENST00000492993 GALR2O43603 387 aaPredicted RBP11.59□□□□□ -0.55
NME9-210ENST00000492993 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
NME9-210ENST00000492993 PROM2Q8N271 834 aa11.53□□□□□ -0.56
NME9-210ENST00000492993 PAK3O75914 559 aaPredicted RBP11.52□□□□□ -0.57
NME9-210ENST00000492993 PHF12Q96QT6 1004 aa11.52□□□□□ -0.57
NME9-210ENST00000492993 POTEB2H3BUK9 544 aa11.44□□□□□ -0.58
NME9-210ENST00000492993 OTUD5Q96G74 571 aa11.42□□□□□ -0.58
NME9-210ENST00000492993 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
NME9-210ENST00000492993 DNAJC5Q9H3Z4 198 aa11.4□□□□□ -0.58
NME9-210ENST00000492993 ASTLQ6HA08 431 aaPredicted RBP11.38□□□□□ -0.59
NME9-210ENST00000492993 MS4A3Q96HJ5 214 aa11.37□□□□□ -0.59
NME9-210ENST00000492993 FKBP8Q14318 412 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 280.1 ms